RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 TTC21BQ7Z4L5 1316 aa23.68■■□□□ 1.38
PSEN1-206ENST00000553447 PHF8Q9UPP1 1060 aa23.68■■□□□ 1.38
PSEN1-206ENST00000553447 TNNT2P45379 298 aaPredicted RBP23.67■■□□□ 1.38
PSEN1-206ENST00000553447 NME9Q86XW9 330 aa23.67■■□□□ 1.38
PSEN1-206ENST00000553447 CENPBP07199 599 aaPredicted RBP23.66■■□□□ 1.38
PSEN1-206ENST00000553447 C1orf167Q5SNV9 1468 aa23.66■■□□□ 1.38
PSEN1-206ENST00000553447 MSH6P52701 1360 aa23.65■■□□□ 1.38
PSEN1-206ENST00000553447 MST1RQ04912 1400 aa23.65■■□□□ 1.38
PSEN1-206ENST00000553447 TTC21AQ8NDW8 1320 aa23.64■■□□□ 1.38
PSEN1-206ENST00000553447 ATF3P18847 181 aa23.64■■□□□ 1.37
PSEN1-206ENST00000553447 ESCO1Q5FWF5 840 aa23.64■■□□□ 1.37
PSEN1-206ENST00000553447 PIK3C2AO00443 1686 aa23.64■■□□□ 1.37
PSEN1-206ENST00000553447 MAP2P11137 1827 aaKnown RBP23.63■■□□□ 1.37
PSEN1-206ENST00000553447 USP54Q70EL1 1684 aa23.63■■□□□ 1.37
PSEN1-206ENST00000553447 SCAF1Q9H7N4 1312 aaKnown RBP23.62■■□□□ 1.37
PSEN1-206ENST00000553447 SHPRHQ149N8 1683 aa23.62■■□□□ 1.37
PSEN1-206ENST00000553447 OVOS2A0A0J9YW53 1432 aa23.61■■□□□ 1.37
PSEN1-206ENST00000553447 OVOS2Q6IE36 1432 aa23.61■■□□□ 1.37
PSEN1-206ENST00000553447 CADPS2Q86UW7 1296 aa23.61■■□□□ 1.37
PSEN1-206ENST00000553447 ZRANB1Q9UGI0 708 aa23.61■■□□□ 1.37
PSEN1-206ENST00000553447 COG3Q96JB2 828 aa23.6■■□□□ 1.37
PSEN1-206ENST00000553447 MARF1Q9Y4F3 1742 aaKnown RBP23.59■■□□□ 1.37
PSEN1-206ENST00000553447 MTHFSP49914 203 aa23.59■■□□□ 1.37
PSEN1-206ENST00000553447 HNRNPUQ00839 825 aaKnown RBP eCLIP23.59■■□□□ 1.37
PSEN1-206ENST00000553447 ORAI2Q96SN7 254 aa23.59■■□□□ 1.37
PSEN1-206ENST00000553447 INSRP06213 1382 aa23.58■■□□□ 1.37
PSEN1-206ENST00000553447 USP31Q70CQ4 1352 aa23.57■■□□□ 1.36
PSEN1-206ENST00000553447 TRPM3Q9HCF6 1732 aaPredicted RBP23.56■■□□□ 1.36
PSEN1-206ENST00000553447 AATKQ6ZMQ8 1374 aa23.56■■□□□ 1.36
PSEN1-206ENST00000553447 CFAP53Q96M91 514 aa23.56■■□□□ 1.36
PSEN1-206ENST00000553447 WDR43Q15061 677 aaKnown RBP eCLIP23.55■■□□□ 1.36
PSEN1-206ENST00000553447 BLMP54132 1417 aaPredicted RBP23.54■■□□□ 1.36
PSEN1-206ENST00000553447 SMG6Q86US8 1419 aaKnown RBP23.54■■□□□ 1.36
PSEN1-206ENST00000553447 PSME1Q06323 249 aa23.54■■□□□ 1.36
PSEN1-206ENST00000553447 COL3A1P02461 1466 aaPredicted RBP23.54■■□□□ 1.36
PSEN1-206ENST00000553447 LTBP4Q8N2S1 1624 aa23.52■■□□□ 1.36
PSEN1-206ENST00000553447 POLKQ9UBT6 870 aa23.51■■□□□ 1.35
PSEN1-206ENST00000553447 FOXO3O43524 673 aa23.5■■□□□ 1.35
PSEN1-206ENST00000553447 PAK3O75914 559 aaPredicted RBP23.5■■□□□ 1.35
PSEN1-206ENST00000553447 ADAMTS8Q9UP79 889 aa23.5■■□□□ 1.35
PSEN1-206ENST00000553447 CDK12Q9NYV4 1490 aaPredicted RBP23.49■■□□□ 1.35
PSEN1-206ENST00000553447 PNPLA6Q8IY17 1366 aa23.49■■□□□ 1.35
PSEN1-206ENST00000553447 FBLN1P23142 703 aa23.48■■□□□ 1.35
PSEN1-206ENST00000553447 ALS2Q96Q42 1657 aa23.48■■□□□ 1.35
PSEN1-206ENST00000553447 NLRP6P59044 892 aa23.47■■□□□ 1.35
PSEN1-206ENST00000553447 ABTB2Q8N961 1025 aa23.47■■□□□ 1.35
PSEN1-206ENST00000553447 ZBED9Q6R2W3 1325 aa23.47■■□□□ 1.35
PSEN1-206ENST00000553447 KRT28Q7Z3Y7 464 aa23.46■■□□□ 1.35
PSEN1-206ENST00000553447 PEAK1Q9H792 1746 aa23.45■■□□□ 1.34
PSEN1-206ENST00000553447 EMILIN1Q9Y6C2 1016 aa23.45■■□□□ 1.34
PSEN1-206ENST00000553447 XPCQ01831 940 aaPredicted RBP23.44■■□□□ 1.34
PSEN1-206ENST00000553447 RRS1Q15050 365 aaKnown RBP23.43■■□□□ 1.34
PSEN1-206ENST00000553447 SLAIN2Q9P270 581 aa23.43■■□□□ 1.34
PSEN1-206ENST00000553447 NPHP3Q7Z494 1330 aa23.42■■□□□ 1.34
PSEN1-206ENST00000553447 PPM1GO15355 546 aaPredicted RBP23.42■■□□□ 1.34
PSEN1-206ENST00000553447 NUTM2GQ5VZR2 741 aa23.42■■□□□ 1.34
PSEN1-206ENST00000553447 LTN1O94822 1766 aa23.42■■□□□ 1.34
PSEN1-206ENST00000553447 PXDNQ92626 1479 aa23.42■■□□□ 1.34
PSEN1-206ENST00000553447 DIAPH1O60610 1272 aaKnown RBP23.41■■□□□ 1.34
PSEN1-206ENST00000553447 BRINP3Q76B58 766 aa23.41■■□□□ 1.34
PSEN1-206ENST00000553447 SBNO1A3KN83 1393 aa23.4■■□□□ 1.34
PSEN1-206ENST00000553447 SLIT3O75094 1523 aa23.4■■□□□ 1.34
PSEN1-206ENST00000553447 AEBP2Q6ZN18 517 aaPredicted RBP23.4■■□□□ 1.34
PSEN1-206ENST00000553447 NUDCQ9Y266 331 aa23.4■■□□□ 1.34
PSEN1-206ENST00000553447 NHSL1Q5SYE7 1610 aa23.4■■□□□ 1.34
PSEN1-206ENST00000553447 NFAT5O94916 1531 aa23.39■■□□□ 1.34
PSEN1-206ENST00000553447 SOX12O15370 315 aa23.38■■□□□ 1.33
PSEN1-206ENST00000553447 DDX17Q92841 729 aaKnown RBP23.38■■□□□ 1.33
PSEN1-206ENST00000553447 MAP3K19Q56UN5 1328 aa23.36■■□□□ 1.33
PSEN1-206ENST00000553447 CCDC146Q8IYE0 955 aa23.36■■□□□ 1.33
PSEN1-206ENST00000553447 TNS3Q68CZ2 1445 aa23.35■■□□□ 1.33
PSEN1-206ENST00000553447 PHRF1Q9P1Y6 1649 aaKnown RBP23.35■■□□□ 1.33
PSEN1-206ENST00000553447 SENP3-EIF4A1A0A087X0R7 540 aa23.35■■□□□ 1.33
PSEN1-206ENST00000553447 U2SURPO15042 1029 aaKnown RBP23.35■■□□□ 1.33
PSEN1-206ENST00000553447 U2AF1L5P0DN76 240 aaPredicted RBP23.35■■□□□ 1.33
PSEN1-206ENST00000553447 U2AF1Q01081 240 aaKnown RBP eCLIP23.35■■□□□ 1.33
PSEN1-206ENST00000553447 IL13P35225 146 aa23.34■■□□□ 1.33
PSEN1-206ENST00000553447 FLT4P35916 1363 aa23.34■■□□□ 1.33
PSEN1-206ENST00000553447 KIF24Q5T7B8 1368 aa23.34■■□□□ 1.33
PSEN1-206ENST00000553447 USP19O94966 1318 aa23.33■■□□□ 1.33
PSEN1-206ENST00000553447 CRYBG1Q9Y4K1 1723 aa23.33■■□□□ 1.33
PSEN1-206ENST00000553447 LMOD2Q6P5Q4 547 aa23.33■■□□□ 1.33
PSEN1-206ENST00000553447 KCNH5Q8NCM2 988 aa23.33■■□□□ 1.33
PSEN1-206ENST00000553447 MED1Q15648 1581 aaPredicted RBP23.32■■□□□ 1.32
PSEN1-206ENST00000553447 RUNDC1Q96C34 613 aa23.32■■□□□ 1.32
PSEN1-206ENST00000553447 RGPD1P0DJD0 1748 aa23.32■■□□□ 1.32
PSEN1-206ENST00000553447 ROBO1Q9Y6N7 1651 aa23.32■■□□□ 1.32
PSEN1-206ENST00000553447 IQSEC2Q5JU85 1478 aa23.31■■□□□ 1.32
PSEN1-206ENST00000553447 SPATA31A3Q5VYP0 1347 aa23.31■■□□□ 1.32
PSEN1-206ENST00000553447 RTL1A6NKG5 1358 aa23.3■■□□□ 1.32
PSEN1-206ENST00000553447 AMPHP49418 695 aa23.3■■□□□ 1.32
PSEN1-206ENST00000553447 SOS2Q07890 1332 aaPredicted RBP23.3■■□□□ 1.32
PSEN1-206ENST00000553447 ARHGEF10O15013 1369 aa23.29■■□□□ 1.32
PSEN1-206ENST00000553447 HSP90AB2PQ58FF8 381 aa23.29■■□□□ 1.32
PSEN1-206ENST00000553447 APAF1O14727 1248 aa23.28■■□□□ 1.32
PSEN1-206ENST00000553447 EIF4A2Q14240 407 aaKnown RBP23.28■■□□□ 1.32
PSEN1-206ENST00000553447 SALL2Q9Y467 1007 aaPredicted RBP23.28■■□□□ 1.32
PSEN1-206ENST00000553447 GCP02774 474 aa23.27■■□□□ 1.32
PSEN1-206ENST00000553447 HOXC9P31274 260 aa23.26■■□□□ 1.31
PSEN1-206ENST00000553447 NGEFQ8N5V2 710 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms