RNA–Protein interactions for RNA: ENST00000553343.5

SDR39U1-204, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-204ENST00000553343 TNS3Q68CZ2 1445 aa28.29■■■□□ 2.12
SDR39U1-204ENST00000553343 LRRC59Q96AG4 307 aaKnown RBP28.28■■■□□ 2.12
SDR39U1-204ENST00000553343 ALS2Q96Q42 1657 aa28.28■■■□□ 2.12
SDR39U1-204ENST00000553343 ARHGEF10O15013 1369 aa28.27■■■□□ 2.12
SDR39U1-204ENST00000553343 USP54Q70EL1 1684 aa28.25■■■□□ 2.11
SDR39U1-204ENST00000553343 SPATA31A3Q5VYP0 1347 aa28.24■■■□□ 2.11
SDR39U1-204ENST00000553343 SHPRHQ149N8 1683 aa28.23■■■□□ 2.11
SDR39U1-204ENST00000553343 PANK3Q9H999 370 aa28.23■■■□□ 2.11
SDR39U1-204ENST00000553343 TTC21BQ7Z4L5 1316 aa28.22■■■□□ 2.11
SDR39U1-204ENST00000553343 COL22A1Q8NFW1 1626 aaPredicted RBP28.22■■■□□ 2.11
SDR39U1-204ENST00000553343 MED1Q15648 1581 aaPredicted RBP28.22■■■□□ 2.11
SDR39U1-204ENST00000553343 NSD3Q9BZ95 1437 aa28.21■■■□□ 2.11
SDR39U1-204ENST00000553343 DDX17Q92841 729 aaKnown RBP28.21■■■□□ 2.11
SDR39U1-204ENST00000553343 NSD2O96028 1365 aa28.19■■■□□ 2.1
SDR39U1-204ENST00000553343 JCADQ9P266 1359 aa28.19■■■□□ 2.1
SDR39U1-204ENST00000553343 PIK3C2AO00443 1686 aa28.19■■■□□ 2.1
SDR39U1-204ENST00000553343 KIF20BQ96Q89 1820 aa28.18■■■□□ 2.1
SDR39U1-204ENST00000553343 USP31Q70CQ4 1352 aa28.18■■■□□ 2.1
SDR39U1-204ENST00000553343 CGNL1Q0VF96 1302 aa28.18■■■□□ 2.1
SDR39U1-204ENST00000553343 HSPA1LP34931 641 aa28.17■■■□□ 2.1
SDR39U1-204ENST00000553343 XPCQ01831 940 aaPredicted RBP28.17■■■□□ 2.1
SDR39U1-204ENST00000553343 CARD14Q9BXL6 1004 aa28.17■■■□□ 2.1
SDR39U1-204ENST00000553343 NPC1L1Q9UHC9 1359 aa28.16■■■□□ 2.1
SDR39U1-204ENST00000553343 PNPLA6Q8IY17 1366 aa28.15■■■□□ 2.1
SDR39U1-204ENST00000553343 PAK3O75914 559 aaPredicted RBP28.15■■■□□ 2.1
SDR39U1-204ENST00000553343 KNSTRNQ9Y448 316 aa28.15■■■□□ 2.1
SDR39U1-204ENST00000553343 PER1O15534 1290 aaPredicted RBP28.14■■■□□ 2.1
SDR39U1-204ENST00000553343 ANKRD26Q9UPS8 1709 aa28.13■■■□□ 2.09
SDR39U1-204ENST00000553343 ABTB2Q8N961 1025 aa28.13■■■□□ 2.09
SDR39U1-204ENST00000553343 NLRP13Q86W25 1043 aa28.12■■■□□ 2.09
SDR39U1-204ENST00000553343 OVOS2A0A0J9YW53 1432 aa28.11■■■□□ 2.09
SDR39U1-204ENST00000553343 OVOS2Q6IE36 1432 aa28.11■■■□□ 2.09
SDR39U1-204ENST00000553343 CRYBG1Q9Y4K1 1723 aa28.11■■■□□ 2.09
SDR39U1-204ENST00000553343 SLIT3O75094 1523 aa28.1■■■□□ 2.09
SDR39U1-204ENST00000553343 USP19O94966 1318 aa28.1■■■□□ 2.09
SDR39U1-204ENST00000553343 SPATA31A6Q5VVP1 1343 aa28.1■■■□□ 2.09
SDR39U1-204ENST00000553343 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.09■■■□□ 2.09
SDR39U1-204ENST00000553343 FYB1O15117 783 aa28.08■■■□□ 2.09
SDR39U1-204ENST00000553343 ABCA3Q99758 1704 aa28.08■■■□□ 2.09
SDR39U1-204ENST00000553343 MARF1Q9Y4F3 1742 aaKnown RBP28.08■■■□□ 2.09
SDR39U1-204ENST00000553343 PHRF1Q9P1Y6 1649 aaKnown RBP28.07■■■□□ 2.08
SDR39U1-204ENST00000553343 DDX10Q13206 875 aaKnown RBP28.07■■■□□ 2.08
SDR39U1-204ENST00000553343 NLRP6P59044 892 aa28.06■■■□□ 2.08
SDR39U1-204ENST00000553343 AMER1Q5JTC6 1135 aaPredicted RBP28.06■■■□□ 2.08
SDR39U1-204ENST00000553343 LMOD2Q6P5Q4 547 aa28.05■■■□□ 2.08
SDR39U1-204ENST00000553343 COG3Q96JB2 828 aa28.05■■■□□ 2.08
SDR39U1-204ENST00000553343 NME9Q86XW9 330 aa28.04■■■□□ 2.08
SDR39U1-204ENST00000553343 KCNH5Q8NCM2 988 aa28.04■■■□□ 2.08
SDR39U1-204ENST00000553343 ABCC6O95255 1503 aa27.98■■■□□ 2.07
SDR39U1-204ENST00000553343 NFAT5O94916 1531 aa27.97■■■□□ 2.07
SDR39U1-204ENST00000553343 GGNBP2Q9H3C7 697 aa27.97■■■□□ 2.07
SDR39U1-204ENST00000553343 CPDO75976 1380 aa27.97■■■□□ 2.07
SDR39U1-204ENST00000553343 AATKQ6ZMQ8 1374 aa27.97■■■□□ 2.07
SDR39U1-204ENST00000553343 GCP02774 474 aa27.95■■■□□ 2.06
SDR39U1-204ENST00000553343 NUTM2GQ5VZR2 741 aa27.94■■■□□ 2.06
SDR39U1-204ENST00000553343 HAP1P54257 671 aaPredicted RBP27.93■■■□□ 2.06
SDR39U1-204ENST00000553343 KIF24Q5T7B8 1368 aa27.93■■■□□ 2.06
SDR39U1-204ENST00000553343 ILDR1Q86SU0 546 aaPredicted RBP27.92■■■□□ 2.06
SDR39U1-204ENST00000553343 MORC1Q86VD1 984 aa27.91■■■□□ 2.06
SDR39U1-204ENST00000553343 ZRANB1Q9UGI0 708 aa27.91■■■□□ 2.06
SDR39U1-204ENST00000553343 COL14A1Q05707 1796 aaKnown RBP27.88■■■□□ 2.05
SDR39U1-204ENST00000553343 RTL1A6NKG5 1358 aa27.88■■■□□ 2.05
SDR39U1-204ENST00000553343 PARD3Q8TEW0 1356 aa27.88■■■□□ 2.05
SDR39U1-204ENST00000553343 CABLES1Q8TDN4 633 aa27.88■■■□□ 2.05
SDR39U1-204ENST00000553343 LRP6O75581 1613 aa27.88■■■□□ 2.05
SDR39U1-204ENST00000553343 LTN1O94822 1766 aa27.87■■■□□ 2.05
SDR39U1-204ENST00000553343 RALBP1Q15311 655 aa27.87■■■□□ 2.05
SDR39U1-204ENST00000553343 SMG6Q86US8 1419 aaKnown RBP27.86■■■□□ 2.05
SDR39U1-204ENST00000553343 CC2D1BQ5T0F9 858 aaKnown RBP27.86■■■□□ 2.05
SDR39U1-204ENST00000553343 ARHGEF25Q86VW2 580 aa27.85■■■□□ 2.05
SDR39U1-204ENST00000553343 KIAA0232Q92628 1395 aa27.84■■■□□ 2.05
SDR39U1-204ENST00000553343 NWD2Q9ULI1 1742 aa27.84■■■□□ 2.05
SDR39U1-204ENST00000553343 LMO7Q8WWI1 1683 aa27.83■■■□□ 2.05
SDR39U1-204ENST00000553343 MAP2P11137 1827 aaKnown RBP27.82■■■□□ 2.04
SDR39U1-204ENST00000553343 NUTM2BA6NNL0 878 aaPredicted RBP27.81■■■□□ 2.04
SDR39U1-204ENST00000553343 NUTM2EB1AL46 878 aaPredicted RBP27.81■■■□□ 2.04
SDR39U1-204ENST00000553343 NUTM2AQ8IVF1 878 aaPredicted RBP27.81■■■□□ 2.04
SDR39U1-204ENST00000553343 PRDM11Q9NQV5 511 aa27.81■■■□□ 2.04
SDR39U1-204ENST00000553343 BLMP54132 1417 aaPredicted RBP27.81■■■□□ 2.04
SDR39U1-204ENST00000553343 COL18A1P39060 1754 aa27.81■■■□□ 2.04
SDR39U1-204ENST00000553343 PLCH1Q4KWH8 1693 aa27.79■■■□□ 2.04
SDR39U1-204ENST00000553343 FLT4P35916 1363 aa27.79■■■□□ 2.04
SDR39U1-204ENST00000553343 ZC3H6P61129 1189 aaKnown RBP27.79■■■□□ 2.04
SDR39U1-204ENST00000553343 SLIT2O94813 1529 aa27.78■■■□□ 2.04
SDR39U1-204ENST00000553343 CDK12Q9NYV4 1490 aaPredicted RBP27.78■■■□□ 2.04
SDR39U1-204ENST00000553343 MAP3K19Q56UN5 1328 aa27.78■■■□□ 2.04
SDR39U1-204ENST00000553343 PRKRIP1Q9H875 184 aaPredicted RBP27.78■■■□□ 2.04
SDR39U1-204ENST00000553343 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.78■■■□□ 2.04
SDR39U1-204ENST00000553343 MEX3CQ5U5Q3 659 aaKnown RBP27.77■■■□□ 2.04
SDR39U1-204ENST00000553343 ANP32CO43423 234 aa27.76■■■□□ 2.03
SDR39U1-204ENST00000553343 POLKQ9UBT6 870 aa27.76■■■□□ 2.03
SDR39U1-204ENST00000553343 SOX12O15370 315 aa27.75■■■□□ 2.03
SDR39U1-204ENST00000553343 ADAMTS2O95450 1211 aa27.75■■■□□ 2.03
SDR39U1-204ENST00000553343 IP6K1Q92551 441 aa27.75■■■□□ 2.03
SDR39U1-204ENST00000553343 PLEKHG5O94827 1062 aa27.74■■■□□ 2.03
SDR39U1-204ENST00000553343 FNBP4Q8N3X1 1017 aaPredicted RBP27.74■■■□□ 2.03
SDR39U1-204ENST00000553343 FAM208AQ9UK61 1670 aaKnown RBP27.74■■■□□ 2.03
SDR39U1-204ENST00000553343 MYBBP1AQ9BQG0 1328 aaKnown RBP27.73■■■□□ 2.03
SDR39U1-204ENST00000553343 PEAK1Q9H792 1746 aa27.73■■■□□ 2.03
SDR39U1-204ENST00000553343 FAM83GA6ND36 823 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms