RNA–Protein interactions for RNA: ENST00000552794.1

PPHLN1-222, Transcript of periphilin 1, human

TSL 4

Gene PPHLN1, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPHLN1-222	ENST00000552794	FAM83G	A6ND36	823 aa		28.66	■■■□□ 2.18
PPHLN1-222	ENST00000552794	SRPK2	P78362	688 aa	Known RBP	28.66	■■■□□ 2.18
PPHLN1-222	ENST00000552794	TOPAZ1	Q8N9V7	1692 aa		28.65	■■■□□ 2.18
PPHLN1-222	ENST00000552794	ACE	P12821	1306 aa		28.65	■■■□□ 2.18
PPHLN1-222	ENST00000552794	COL14A1	Q05707	1796 aa	Known RBP	28.65	■■■□□ 2.18
PPHLN1-222	ENST00000552794	PLEKHG3	A1L390	1219 aa		28.63	■■■□□ 2.17
PPHLN1-222	ENST00000552794	NEUROD1	Q13562	356 aa		28.63	■■■□□ 2.17
PPHLN1-222	ENST00000552794	SIN3A	Q96ST3	1273 aa		28.63	■■■□□ 2.17
PPHLN1-222	ENST00000552794	PRDM11	Q9NQV5	511 aa		28.63	■■■□□ 2.17
PPHLN1-222	ENST00000552794	BTG4	Q9NY30	223 aa		28.63	■■■□□ 2.17
PPHLN1-222	ENST00000552794	SEPT12	Q8IYM1	358 aa		28.62	■■■□□ 2.17
PPHLN1-222	ENST00000552794	NBPF8	Q3BBV2	869 aa		28.61	■■■□□ 2.17
PPHLN1-222	ENST00000552794	QRICH2	Q9H0J4	1663 aa		28.59	■■■□□ 2.17
PPHLN1-222	ENST00000552794		A0A0G2JS52	829 aa		28.59	■■■□□ 2.17
PPHLN1-222	ENST00000552794	MYT1	Q01538	1121 aa		28.59	■■■□□ 2.17
PPHLN1-222	ENST00000552794	CRYBG1	Q9Y4K1	1723 aa		28.59	■■■□□ 2.17
PPHLN1-222	ENST00000552794	ROCK2	O75116	1388 aa	Known RBP	28.59	■■■□□ 2.17
PPHLN1-222	ENST00000552794	NRAP	Q86VF7	1730 aa		28.58	■■■□□ 2.17
PPHLN1-222	ENST00000552794	PPIP5K1	Q6PFW1	1433 aa		28.58	■■■□□ 2.17
PPHLN1-222	ENST00000552794	ONECUT3	O60422	494 aa	Predicted RBP	28.57	■■■□□ 2.16
PPHLN1-222	ENST00000552794	TRPM1	Q7Z4N2	1603 aa		28.57	■■■□□ 2.16
PPHLN1-222	ENST00000552794	BRD4	O60885	1362 aa	Predicted RBP	28.55	■■■□□ 2.16
PPHLN1-222	ENST00000552794	ABTB2	Q8N961	1025 aa		28.55	■■■□□ 2.16
PPHLN1-222	ENST00000552794	CABP2	Q9NPB3	220 aa		28.55	■■■□□ 2.16
PPHLN1-222	ENST00000552794	BLM	P54132	1417 aa	Predicted RBP	28.54	■■■□□ 2.16
PPHLN1-222	ENST00000552794	EVC2	Q86UK5	1308 aa		28.54	■■■□□ 2.16
PPHLN1-222	ENST00000552794	KIAA0232	Q92628	1395 aa		28.53	■■■□□ 2.16
PPHLN1-222	ENST00000552794	SF3B2	Q13435	895 aa	Known RBP	28.53	■■■□□ 2.16
PPHLN1-222	ENST00000552794	KRT27	Q7Z3Y8	459 aa		28.53	■■■□□ 2.16
PPHLN1-222	ENST00000552794	PHRF1	Q9P1Y6	1649 aa	Known RBP	28.53	■■■□□ 2.16
PPHLN1-222	ENST00000552794	NUTM2G	Q5VZR2	741 aa		28.52	■■■□□ 2.16
PPHLN1-222	ENST00000552794	BRWD3	Q6RI45	1802 aa		28.51	■■■□□ 2.15
PPHLN1-222	ENST00000552794	FAM98C	Q17RN3	349 aa	Known RBP	28.51	■■■□□ 2.15
PPHLN1-222	ENST00000552794	NLRP13	Q86W25	1043 aa		28.5	■■■□□ 2.15
PPHLN1-222	ENST00000552794	SPATA31A5	Q5VU36	1347 aa		28.49	■■■□□ 2.15
PPHLN1-222	ENST00000552794	SPATA31A7	Q8IWB4	1347 aa		28.49	■■■□□ 2.15
PPHLN1-222	ENST00000552794	ZC3H6	P61129	1189 aa	Known RBP	28.48	■■■□□ 2.15
PPHLN1-222	ENST00000552794	ZRANB1	Q9UGI0	708 aa		28.48	■■■□□ 2.15
PPHLN1-222	ENST00000552794	USP19	O94966	1318 aa		28.46	■■■□□ 2.15
PPHLN1-222	ENST00000552794	CHRNA2	Q15822	529 aa		28.46	■■■□□ 2.15
PPHLN1-222	ENST00000552794	CABP1	Q9NZU7	370 aa		28.46	■■■□□ 2.15
PPHLN1-222	ENST00000552794	EP400	Q96L91	3159 aa		28.46	■■■□□ 2.15
PPHLN1-222	ENST00000552794	TONSL	Q96HA7	1378 aa		28.45	■■■□□ 2.14
PPHLN1-222	ENST00000552794	NRK	Q7Z2Y5	1582 aa		28.45	■■■□□ 2.14
PPHLN1-222	ENST00000552794	USP6	P35125	1406 aa		28.44	■■■□□ 2.14
PPHLN1-222	ENST00000552794	STRN4	Q9NRL3	753 aa		28.44	■■■□□ 2.14
PPHLN1-222	ENST00000552794	CPD	O75976	1380 aa		28.44	■■■□□ 2.14
PPHLN1-222	ENST00000552794	EVA1C	P58658	441 aa		28.42	■■■□□ 2.14
PPHLN1-222	ENST00000552794	SPATA31A1	Q5TZJ5	1347 aa		28.41	■■■□□ 2.14
PPHLN1-222	ENST00000552794	GC	P02774	474 aa		28.4	■■■□□ 2.14
PPHLN1-222	ENST00000552794	ZNF692	Q9BU19	519 aa	Predicted RBP	28.39	■■■□□ 2.14
PPHLN1-222	ENST00000552794	SSH2	Q76I76	1423 aa		28.38	■■■□□ 2.13
PPHLN1-222	ENST00000552794	NLRP6	P59044	892 aa		28.38	■■■□□ 2.13
PPHLN1-222	ENST00000552794	CARD11	Q9BXL7	1154 aa		28.38	■■■□□ 2.13
PPHLN1-222	ENST00000552794	SBNO2	Q9Y2G9	1366 aa		28.37	■■■□□ 2.13
PPHLN1-222	ENST00000552794	TRIM26	Q12899	539 aa	Predicted RBP	28.37	■■■□□ 2.13
PPHLN1-222	ENST00000552794	THSD7A	Q9UPZ6	1657 aa		28.37	■■■□□ 2.13
PPHLN1-222	ENST00000552794	BAG6	P46379	1132 aa		28.35	■■■□□ 2.13
PPHLN1-222	ENST00000552794	DEFB132	Q7Z7B7	95 aa		28.34	■■■□□ 2.13
PPHLN1-222	ENST00000552794	USP35	Q9P2H5	1018 aa		28.33	■■■□□ 2.13
PPHLN1-222	ENST00000552794	LMO7	Q8WWI1	1683 aa		28.32	■■■□□ 2.12
PPHLN1-222	ENST00000552794	CAMTA1	Q9Y6Y1	1673 aa		28.32	■■■□□ 2.12
PPHLN1-222	ENST00000552794	BARGIN	Q6ZT62	677 aa		28.32	■■■□□ 2.12
PPHLN1-222	ENST00000552794	TTC21A	Q8NDW8	1320 aa		28.31	■■■□□ 2.12
PPHLN1-222	ENST00000552794	SLIT3	O75094	1523 aa		28.3	■■■□□ 2.12
PPHLN1-222	ENST00000552794	TCP11L2	Q8N4U5	519 aa		28.3	■■■□□ 2.12
PPHLN1-222	ENST00000552794	ZBTB7C	A1YPR0	619 aa		28.29	■■■□□ 2.12
PPHLN1-222	ENST00000552794	THRAP3	Q9Y2W1	955 aa	Known RBP	28.29	■■■□□ 2.12
PPHLN1-222	ENST00000552794	TTC21B	Q7Z4L5	1316 aa		28.28	■■■□□ 2.12
PPHLN1-222	ENST00000552794	LARP1	Q6PKG0	1096 aa	Known RBP	28.28	■■■□□ 2.12
PPHLN1-222	ENST00000552794	COL5A2	P05997	1499 aa	Predicted RBP	28.27	■■■□□ 2.12
PPHLN1-222	ENST00000552794	AATK	Q6ZMQ8	1374 aa		28.27	■■■□□ 2.12
PPHLN1-222	ENST00000552794	PIK3C2A	O00443	1686 aa		28.27	■■■□□ 2.12
PPHLN1-222	ENST00000552794	PDE3B	Q13370	1112 aa		28.27	■■■□□ 2.12
PPHLN1-222	ENST00000552794	FAM196A	Q6ZSG2	479 aa		28.27	■■■□□ 2.12
PPHLN1-222	ENST00000552794	KCNH5	Q8NCM2	988 aa		28.27	■■■□□ 2.12
PPHLN1-222	ENST00000552794	CPSF1	Q10570	1443 aa	Known RBP	28.26	■■■□□ 2.12
PPHLN1-222	ENST00000552794	RGPD1	P0DJD0	1748 aa		28.26	■■■□□ 2.12
PPHLN1-222	ENST00000552794	KTN1	Q86UP2	1357 aa	Known RBP	28.26	■■■□□ 2.12
PPHLN1-222	ENST00000552794	AKAP12	Q02952	1782 aa		28.26	■■■□□ 2.11
PPHLN1-222	ENST00000552794	FAM182B	Q5T319	152 aa		28.24	■■■□□ 2.11
PPHLN1-222	ENST00000552794	CRB1	P82279	1406 aa		28.24	■■■□□ 2.11
PPHLN1-222	ENST00000552794	DISP2	A7MBM2	1401 aa		28.2	■■■□□ 2.11
PPHLN1-222	ENST00000552794	SLC24A1	O60721	1099 aa		28.2	■■■□□ 2.1
PPHLN1-222	ENST00000552794	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	28.19	■■■□□ 2.1
PPHLN1-222	ENST00000552794	TMC1	Q8TDI8	760 aa		28.19	■■■□□ 2.1
PPHLN1-222	ENST00000552794	C11orf95	C9JLR9	678 aa	Predicted RBP	28.18	■■■□□ 2.1
PPHLN1-222	ENST00000552794	TOM1L2	Q6ZVM7	507 aa		28.18	■■■□□ 2.1
PPHLN1-222	ENST00000552794	MON2	Q7Z3U7	1717 aa		28.18	■■■□□ 2.1
PPHLN1-222	ENST00000552794	EN1	Q05925	392 aa	Predicted RBP	28.17	■■■□□ 2.1
PPHLN1-222	ENST00000552794	PUS7	Q96PZ0	661 aa	Known RBP	28.17	■■■□□ 2.1
PPHLN1-222	ENST00000552794	ARHGEF25	Q86VW2	580 aa		28.16	■■■□□ 2.1
PPHLN1-222	ENST00000552794	TERF2IP	Q9NYB0	399 aa		28.16	■■■□□ 2.1
PPHLN1-222	ENST00000552794	SOX12	O15370	315 aa		28.15	■■■□□ 2.1
PPHLN1-222	ENST00000552794	TRIM37	O94972	964 aa		28.15	■■■□□ 2.1
PPHLN1-222	ENST00000552794	WDR17	Q8IZU2	1322 aa		28.15	■■■□□ 2.1
PPHLN1-222	ENST00000552794	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	28.14	■■■□□ 2.1	4e-7	■■■■□ 22.4
PPHLN1-222	ENST00000552794	TNS1	Q9HBL0	1735 aa	Known RBP	28.14	■■■□□ 2.1
PPHLN1-222	ENST00000552794	PARP4	Q9UKK3	1724 aa	Known RBP	28.13	■■■□□ 2.09
PPHLN1-222	ENST00000552794	PARD3	Q8TEW0	1356 aa		28.12	■■■□□ 2.09

Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms