RNA–Protein interactions for RNA: ENST00000552329.1

CHPT1-209, Transcript of choline phosphotransferase 1, humanhuman

TSL 4

Gene CHPT1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-209ENST00000552329 BANK1Q8NDB2 785 aa13.07□□□□□ -0.32
CHPT1-209ENST00000552329 FOXJ1Q92949 421 aa13.07□□□□□ -0.32
CHPT1-209ENST00000552329 AGERQ15109 404 aa13.06□□□□□ -0.32
CHPT1-209ENST00000552329 RC3H1Q5TC82 1133 aaKnown RBP13.06□□□□□ -0.32
CHPT1-209ENST00000552329 TRIM67Q6ZTA4 783 aa13.06□□□□□ -0.32
CHPT1-209ENST00000552329 PKD2L1Q9P0L9 805 aa13.06□□□□□ -0.32
CHPT1-209ENST00000552329 PDZRN3Q9UPQ7 1066 aa13.06□□□□□ -0.32
CHPT1-209ENST00000552329 GJD4Q96KN9 370 aaPredicted RBP13.05□□□□□ -0.32
CHPT1-209ENST00000552329 MRGPRX2Q96LB1 330 aa13.04□□□□□ -0.32
CHPT1-209ENST00000552329 WNT7BP56706 349 aa13.03□□□□□ -0.32
CHPT1-209ENST00000552329 EHBP1Q8NDI1 1231 aa13.03□□□□□ -0.32
CHPT1-209ENST00000552329 CARD14Q9BXL6 1004 aa13.03□□□□□ -0.32
CHPT1-209ENST00000552329 FKBPLQ9UIM3 349 aa13.03□□□□□ -0.32
CHPT1-209ENST00000552329 MAGEB6P1A0A0J9YX57 407 aa13.02□□□□□ -0.33
CHPT1-209ENST00000552329 GDF9O60383 454 aa13.02□□□□□ -0.33
CHPT1-209ENST00000552329 GFRA3O60609 400 aa13.02□□□□□ -0.33
CHPT1-209ENST00000552329 ARMC2Q8NEN0 867 aa13.01□□□□□ -0.33
CHPT1-209ENST00000552329 WNT7AO00755 349 aa13□□□□□ -0.33
CHPT1-209ENST00000552329 MCM6Q14566 821 aa13□□□□□ -0.33
CHPT1-209ENST00000552329 NBPF14Q5TI25 921 aa13□□□□□ -0.33
CHPT1-209ENST00000552329 IRX2Q9BZI1 471 aaPredicted RBP13□□□□□ -0.33
CHPT1-209ENST00000552329 C4orf48Q5BLP8 95 aa12.99□□□□□ -0.33
CHPT1-209ENST00000552329 TBC1D2BQ9UPU7 963 aa12.99□□□□□ -0.33
CHPT1-209ENST00000552329 TTC24A2A3L6 582 aaPredicted RBP12.96□□□□□ -0.33
CHPT1-209ENST00000552329 CYP4X1Q8N118 509 aa12.96□□□□□ -0.33
CHPT1-209ENST00000552329 TLL2Q9Y6L7 1015 aa12.96□□□□□ -0.33
CHPT1-209ENST00000552329 ARID5BQ14865 1188 aa12.95□□□□□ -0.34
CHPT1-209ENST00000552329 BPHLQ86WA6 291 aaPredicted RBP12.95□□□□□ -0.34
CHPT1-209ENST00000552329 PNMA1Q8ND90 353 aa12.95□□□□□ -0.34
CHPT1-209ENST00000552329 ARHGAP9Q9BRR9 750 aa12.95□□□□□ -0.34
CHPT1-209ENST00000552329 GDPD2Q9HCC8 539 aa12.95□□□□□ -0.34
CHPT1-209ENST00000552329 NDUFB9Q9Y6M9 179 aa12.95□□□□□ -0.34
CHPT1-209ENST00000552329 SH3BP5LQ7L8J4 393 aa12.94□□□□□ -0.34
CHPT1-209ENST00000552329 ALDH1A1P00352 501 aa12.93□□□□□ -0.34
CHPT1-209ENST00000552329 J3QL48 77 aa12.92□□□□□ -0.34
CHPT1-209ENST00000552329 ABL2P42684 1182 aa12.92□□□□□ -0.34
CHPT1-209ENST00000552329 PRR20EP86478 221 aa12.92□□□□□ -0.34
CHPT1-209ENST00000552329 PRR20CP86479 221 aa12.92□□□□□ -0.34
CHPT1-209ENST00000552329 PRR20DP86480 221 aa12.92□□□□□ -0.34
CHPT1-209ENST00000552329 PRR20BP86481 221 aa12.92□□□□□ -0.34
CHPT1-209ENST00000552329 PRR20AP86496 221 aa12.92□□□□□ -0.34
CHPT1-209ENST00000552329 PDXDC2PQ6P474 469 aa12.92□□□□□ -0.34
CHPT1-209ENST00000552329 POM121Q96HA1 1249 aa12.92□□□□□ -0.34
CHPT1-209ENST00000552329 FAM187AA6NFU0 413 aa12.91□□□□□ -0.34
CHPT1-209ENST00000552329 APBB1O00213 710 aa12.91□□□□□ -0.34
CHPT1-209ENST00000552329 VARSP26640 1264 aaKnown RBP12.91□□□□□ -0.34
CHPT1-209ENST00000552329 SH3RF1Q7Z6J0 888 aa12.91□□□□□ -0.34
CHPT1-209ENST00000552329 ZBTB33Q86T24 672 aa12.91□□□□□ -0.34
CHPT1-209ENST00000552329 OCSTAMPQ9BR26 566 aa12.91□□□□□ -0.34
CHPT1-209ENST00000552329 SIAH2O43255 324 aa12.9□□□□□ -0.34
CHPT1-209ENST00000552329 GPR37L1O60883 481 aa12.9□□□□□ -0.34
CHPT1-209ENST00000552329 PTK2Q05397 1052 aa12.9□□□□□ -0.34
CHPT1-209ENST00000552329 SNIP1Q8TAD8 396 aaKnown RBP12.9□□□□□ -0.34
CHPT1-209ENST00000552329 FAM174AQ8TBP5 190 aa12.9□□□□□ -0.34
CHPT1-209ENST00000552329 GPKOWQ92917 476 aaPredicted RBP eCLIP12.9□□□□□ -0.34
CHPT1-209ENST00000552329 TOR4AQ9NXH8 423 aa12.9□□□□□ -0.34
CHPT1-209ENST00000552329 NRG2O14511 850 aaPredicted RBP12.89□□□□□ -0.35
CHPT1-209ENST00000552329 UBTFP17480 764 aaKnown RBP12.89□□□□□ -0.35
CHPT1-209ENST00000552329 ZC3H4Q9UPT8 1303 aaKnown RBP12.88□□□□□ -0.35
CHPT1-209ENST00000552329 FLIIQ13045 1269 aa12.88□□□□□ -0.35
CHPT1-209ENST00000552329 ERFEQ4G0M1 354 aa12.88□□□□□ -0.35
CHPT1-209ENST00000552329 ADAM32Q8TC27 787 aa12.88□□□□□ -0.35
CHPT1-209ENST00000552329 FBXO45P0C2W1 286 aa12.87□□□□□ -0.35
CHPT1-209ENST00000552329 PRM3Q9NNZ6 103 aa12.87□□□□□ -0.35
CHPT1-209ENST00000552329 Q6ZNB5 142 aa12.86□□□□□ -0.35
CHPT1-209ENST00000552329 COG6Q9Y2V7 657 aa12.86□□□□□ -0.35
CHPT1-209ENST00000552329 ZBBXA8MT70 800 aa12.85□□□□□ -0.35
CHPT1-209ENST00000552329 SOCS7O14512 581 aa12.85□□□□□ -0.35
CHPT1-209ENST00000552329 SMPD1P17405 629 aa12.85□□□□□ -0.35
CHPT1-209ENST00000552329 PKDCCQ504Y2 493 aa12.85□□□□□ -0.35
CHPT1-209ENST00000552329 GTF3C3Q9Y5Q9 886 aa12.85□□□□□ -0.35
CHPT1-209ENST00000552329 WASF2Q9Y6W5 498 aa12.85□□□□□ -0.35
CHPT1-209ENST00000552329 IRF5Q13568 498 aa12.84□□□□□ -0.35
CHPT1-209ENST00000552329 CLUAP1Q96AJ1 413 aa12.84□□□□□ -0.35
CHPT1-209ENST00000552329 C1QTNF2Q9BXJ5 285 aa12.83□□□□□ -0.36
CHPT1-209ENST00000552329 RAD21O60216 631 aa12.82□□□□□ -0.36
CHPT1-209ENST00000552329 VAC14Q08AM6 782 aa12.82□□□□□ -0.36
CHPT1-209ENST00000552329 LAPTM4AQ15012 233 aa12.82□□□□□ -0.36
CHPT1-209ENST00000552329 VASH1Q7L8A9 365 aaPredicted RBP12.82□□□□□ -0.36
CHPT1-209ENST00000552329 SLC10A4Q96EP9 437 aa12.82□□□□□ -0.36
CHPT1-209ENST00000552329 PCDHB9Q9Y5E1 797 aa12.82□□□□□ -0.36
CHPT1-209ENST00000552329 RAB15P59190 212 aa12.81□□□□□ -0.36
CHPT1-209ENST00000552329 DZIP3Q86Y13 1208 aaKnown RBP12.81□□□□□ -0.36
CHPT1-209ENST00000552329 HPS1Q92902 700 aa12.81□□□□□ -0.36
CHPT1-209ENST00000552329 GPSM3Q9Y4H4 160 aa12.81□□□□□ -0.36
CHPT1-209ENST00000552329 NR1H3Q13133 447 aa12.79□□□□□ -0.36
CHPT1-209ENST00000552329 ADH1CP00326 375 aa12.78□□□□□ -0.36
CHPT1-209ENST00000552329 FSHRP23945 695 aa12.78□□□□□ -0.36
CHPT1-209ENST00000552329 GRM5P41594 1212 aa12.77□□□□□ -0.37
CHPT1-209ENST00000552329 NNTQ13423 1086 aa12.77□□□□□ -0.37
CHPT1-209ENST00000552329 TRMT44Q8IYL2 757 aaKnown RBP12.77□□□□□ -0.37
CHPT1-209ENST00000552329 CDK15Q96Q40 435 aa12.77□□□□□ -0.37
CHPT1-209ENST00000552329 NR3C2P08235 984 aa12.76□□□□□ -0.37
CHPT1-209ENST00000552329 ST8SIA5O15466 376 aa12.75□□□□□ -0.37
CHPT1-209ENST00000552329 DGAT1O75907 488 aa12.75□□□□□ -0.37
CHPT1-209ENST00000552329 KCTD15Q96SI1 283 aaPredicted RBP12.75□□□□□ -0.37
CHPT1-209ENST00000552329 LCE2BO14633 110 aa12.72□□□□□ -0.37
CHPT1-209ENST00000552329 MYT1Q01538 1121 aa12.72□□□□□ -0.37
CHPT1-209ENST00000552329 MPNDQ8N594 471 aa12.72□□□□□ -0.37
CHPT1-209ENST00000552329 MAP4K5Q9Y4K4 846 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 175 ms