RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 SPON1Q9HCB6 807 aa22.79■■□□□ 1.24
BRF1-220ENST00000552127 UTRNP46939 3433 aa22.78■■□□□ 1.24
BRF1-220ENST00000552127 ADGRF5Q8IZF2 1346 aa22.78■■□□□ 1.24
BRF1-220ENST00000552127 SENP3-EIF4A1A0A087X0R7 540 aa22.77■■□□□ 1.24
BRF1-220ENST00000552127 NBPF8Q3BBV2 869 aa22.77■■□□□ 1.24
BRF1-220ENST00000552127 NBPF14Q5TI25 921 aa22.77■■□□□ 1.24
BRF1-220ENST00000552127 TMEM132EQ6IEE7 984 aa22.77■■□□□ 1.24
BRF1-220ENST00000552127 KCNQ2O43526 872 aa22.76■■□□□ 1.23
BRF1-220ENST00000552127 ZNF784Q8NCA9 323 aaPredicted RBP22.76■■□□□ 1.23
BRF1-220ENST00000552127 ANKRD30BQ9BXX2 1392 aa22.76■■□□□ 1.23
BRF1-220ENST00000552127 RGL3Q3MIN7 710 aa22.73■■□□□ 1.23
BRF1-220ENST00000552127 TRPM3Q9HCF6 1732 aaPredicted RBP22.72■■□□□ 1.23
BRF1-220ENST00000552127 PMFBP1Q8TBY8 1022 aa22.71■■□□□ 1.23
BRF1-220ENST00000552127 PIK3C2GO75747 1445 aa22.71■■□□□ 1.23
BRF1-220ENST00000552127 SPATA31A1Q5TZJ5 1347 aa22.7■■□□□ 1.22
BRF1-220ENST00000552127 YTHDC2Q9H6S0 1430 aaKnown RBP22.7■■□□□ 1.22
BRF1-220ENST00000552127 ALS2Q96Q42 1657 aa22.7■■□□□ 1.22
BRF1-220ENST00000552127 SIRT1Q96EB6 747 aa22.67■■□□□ 1.22
BRF1-220ENST00000552127 CRYBG1Q9Y4K1 1723 aa22.67■■□□□ 1.22
BRF1-220ENST00000552127 C1QTNF8P60827 252 aa22.66■■□□□ 1.22
BRF1-220ENST00000552127 PRDM11Q9NQV5 511 aa22.65■■□□□ 1.22
BRF1-220ENST00000552127 NRKQ7Z2Y5 1582 aa22.63■■□□□ 1.21
BRF1-220ENST00000552127 PDE3BQ13370 1112 aa22.62■■□□□ 1.21
BRF1-220ENST00000552127 STRN4Q9NRL3 753 aa22.62■■□□□ 1.21
BRF1-220ENST00000552127 SAFB2Q14151 953 aaKnown RBP eCLIP22.61■■□□□ 1.21
BRF1-220ENST00000552127 ANKARQ7Z5J8 1434 aa22.61■■□□□ 1.21
BRF1-220ENST00000552127 USP35Q9P2H5 1018 aa22.61■■□□□ 1.21
BRF1-220ENST00000552127 GPRASP1Q5JY77 1395 aa22.6■■□□□ 1.21
BRF1-220ENST00000552127 CHD4Q14839 1912 aa22.59■■□□□ 1.21
BRF1-220ENST00000552127 CASZ1Q86V15 1759 aa22.59■■□□□ 1.21
BRF1-220ENST00000552127 CHRNA2Q15822 529 aa22.59■■□□□ 1.21
BRF1-220ENST00000552127 KIAA0232Q92628 1395 aa22.58■■□□□ 1.21
BRF1-220ENST00000552127 BARGINQ6ZT62 677 aa22.57■■□□□ 1.2
BRF1-220ENST00000552127 PRAM1Q96QH2 718 aa22.57■■□□□ 1.2
BRF1-220ENST00000552127 MYOM1P52179 1685 aa22.57■■□□□ 1.2
BRF1-220ENST00000552127 CEP350Q5VT06 3117 aa22.54■■□□□ 1.2
BRF1-220ENST00000552127 PAK3O75914 559 aaPredicted RBP22.54■■□□□ 1.2
BRF1-220ENST00000552127 PDGFDQ9GZP0 370 aaPredicted RBP22.54■■□□□ 1.2
BRF1-220ENST00000552127 C14orf93Q9H972 538 aaKnown RBP22.53■■□□□ 1.2
BRF1-220ENST00000552127 ANO8Q9HCE9 1232 aaPredicted RBP22.53■■□□□ 1.2
BRF1-220ENST00000552127 DHX57Q6P158 1386 aaKnown RBP22.52■■□□□ 1.2
BRF1-220ENST00000552127 ADGRB1O14514 1584 aa22.52■■□□□ 1.2
BRF1-220ENST00000552127 ZBTB7AO95365 584 aa22.52■■□□□ 1.2
BRF1-220ENST00000552127 RGPD3A6NKT7 1758 aaPredicted RBP22.52■■□□□ 1.2
BRF1-220ENST00000552127 RGPD4Q7Z3J3 1758 aa22.52■■□□□ 1.2
BRF1-220ENST00000552127 PHRF1Q9P1Y6 1649 aaKnown RBP22.52■■□□□ 1.2
BRF1-220ENST00000552127 SSH2Q76I76 1423 aa22.51■■□□□ 1.19
BRF1-220ENST00000552127 PTGER2P43116 358 aa22.51■■□□□ 1.19
BRF1-220ENST00000552127 EVA1CP58658 441 aa22.5■■□□□ 1.19
BRF1-220ENST00000552127 ZC3H6P61129 1189 aaKnown RBP22.5■■□□□ 1.19
BRF1-220ENST00000552127 CFAP70Q5T0N1 1121 aa22.5■■□□□ 1.19
BRF1-220ENST00000552127 DLC1Q96QB1 1528 aa22.5■■□□□ 1.19
BRF1-220ENST00000552127 PRR36Q9H6K5 1346 aa22.5■■□□□ 1.19
BRF1-220ENST00000552127 SYT17Q9BSW7 474 aa22.49■■□□□ 1.19
BRF1-220ENST00000552127 POGKQ9P215 609 aa22.49■■□□□ 1.19
BRF1-220ENST00000552127 LARP1Q6PKG0 1096 aaKnown RBP22.48■■□□□ 1.19
BRF1-220ENST00000552127 TCP11L2Q8N4U5 519 aa22.48■■□□□ 1.19
BRF1-220ENST00000552127 HIRIP3Q9BW71 556 aaPredicted RBP22.48■■□□□ 1.19
BRF1-220ENST00000552127 FHDC1Q9C0D6 1143 aaPredicted RBP22.48■■□□□ 1.19
BRF1-220ENST00000552127 PLSCR1O15162 318 aa22.47■■□□□ 1.19
BRF1-220ENST00000552127 NGDNQ8NEJ9 315 aaKnown RBP22.47■■□□□ 1.19
BRF1-220ENST00000552127 ATF5Q9Y2D1 282 aaPredicted RBP22.47■■□□□ 1.19
BRF1-220ENST00000552127 KIAA1210Q9ULL0 1709 aa22.47■■□□□ 1.19
BRF1-220ENST00000552127 PARP4Q9UKK3 1724 aaKnown RBP22.46■■□□□ 1.19
BRF1-220ENST00000552127 ARHGEF28Q8N1W1 1705 aaKnown RBP22.45■■□□□ 1.19
BRF1-220ENST00000552127 SBF2Q86WG5 1849 aa22.45■■□□□ 1.19
BRF1-220ENST00000552127 DCAF11Q8TEB1 546 aa22.45■■□□□ 1.18
BRF1-220ENST00000552127 TULP4Q9NRJ4 1543 aa22.45■■□□□ 1.18
BRF1-220ENST00000552127 PEAK1Q9H792 1746 aa22.45■■□□□ 1.18
BRF1-220ENST00000552127 EIF3AQ14152 1382 aaKnown RBP22.43■■□□□ 1.18
BRF1-220ENST00000552127 C11orf95C9JLR9 678 aaPredicted RBP22.43■■□□□ 1.18
BRF1-220ENST00000552127 STAC3Q96MF2 364 aa22.43■■□□□ 1.18
BRF1-220ENST00000552127 BCL11BQ9C0K0 894 aaPredicted RBP22.43■■□□□ 1.18
BRF1-220ENST00000552127 KDM2AQ9Y2K7 1162 aa22.43■■□□□ 1.18
BRF1-220ENST00000552127 OVOS2A0A0G2JMS6 1433 aa22.42■■□□□ 1.18
BRF1-220ENST00000552127 OVOS2A0A0J9YW53 1432 aa22.42■■□□□ 1.18
BRF1-220ENST00000552127 OVOS2Q6IE36 1432 aa22.42■■□□□ 1.18
BRF1-220ENST00000552127 GIGYF1O75420 1035 aaPredicted RBP22.42■■□□□ 1.18
BRF1-220ENST00000552127 THRAP3Q9Y2W1 955 aaKnown RBP22.42■■□□□ 1.18
BRF1-220ENST00000552127 MINK1Q8N4C8 1332 aaPredicted RBP22.41■■□□□ 1.18
BRF1-220ENST00000552127 NUTM2GQ5VZR2 741 aa22.41■■□□□ 1.18
BRF1-220ENST00000552127 LMO7Q8WWI1 1683 aa22.4■■□□□ 1.18
BRF1-220ENST00000552127 PROM2Q8N271 834 aa22.4■■□□□ 1.18
BRF1-220ENST00000552127 PTF1AQ7RTS3 328 aa22.39■■□□□ 1.17
BRF1-220ENST00000552127 WASLO00401 505 aaPredicted RBP22.38■■□□□ 1.17
BRF1-220ENST00000552127 ATP7BP35670 1465 aa22.38■■□□□ 1.17
BRF1-220ENST00000552127 SGIP1Q9BQI5 828 aa22.36■■□□□ 1.17
BRF1-220ENST00000552127 ITSN1Q15811 1721 aa22.35■■□□□ 1.17
BRF1-220ENST00000552127 TRAK1Q9UPV9 953 aa22.35■■□□□ 1.17
BRF1-220ENST00000552127 LRRC37A3O60309 1634 aa22.35■■□□□ 1.17
BRF1-220ENST00000552127 MTFR1LQ9H019 292 aa22.34■■□□□ 1.17
BRF1-220ENST00000552127 STK32BQ9NY57 414 aa22.34■■□□□ 1.17
BRF1-220ENST00000552127 GOLGB1Q14789 3259 aaKnown RBP22.34■■□□□ 1.17
BRF1-220ENST00000552127 SLC15A2Q16348 729 aa22.33■■□□□ 1.17
BRF1-220ENST00000552127 CPDO75976 1380 aa22.33■■□□□ 1.17
BRF1-220ENST00000552127 COL5A2P05997 1499 aaPredicted RBP22.32■■□□□ 1.16
BRF1-220ENST00000552127 DDB1Q16531 1140 aa22.3■■□□□ 1.16
BRF1-220ENST00000552127 GPR162Q16538 588 aa22.3■■□□□ 1.16
BRF1-220ENST00000552127 ARXQ96QS3 562 aa22.3■■□□□ 1.16
BRF1-220ENST00000552127 CRB1P82279 1406 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms