RNA–Protein interactions for RNA: ENST00000552009.1

GNPTAB-209, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 601 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-209ENST00000552009 C6orf229H3BNL8 230 aa12.21□□□□□ -0.45
GNPTAB-209ENST00000552009 LCE2BO14633 110 aa12.21□□□□□ -0.45
GNPTAB-209ENST00000552009 CYP4X1Q8N118 509 aa12.21□□□□□ -0.45
GNPTAB-209ENST00000552009 SPIRE2Q8WWL2 714 aa12.21□□□□□ -0.45
GNPTAB-209ENST00000552009 TOP2BQ02880 1626 aa12.21□□□□□ -0.46
GNPTAB-209ENST00000552009 BIVM-ERCC5R4GMW8 1640 aa12.2□□□□□ -0.46
GNPTAB-209ENST00000552009 BEGAINQ9BUH8 593 aa12.2□□□□□ -0.46
GNPTAB-209ENST00000552009 PKD2L1Q9P0L9 805 aa12.2□□□□□ -0.46
GNPTAB-209ENST00000552009 ADAMTS12P58397 1594 aa12.2□□□□□ -0.46
GNPTAB-209ENST00000552009 GRIN2AQ12879 1464 aa12.2□□□□□ -0.46
GNPTAB-209ENST00000552009 TRIM66O15016 1216 aa12.19□□□□□ -0.46
GNPTAB-209ENST00000552009 JUNDP17535 347 aa12.19□□□□□ -0.46
GNPTAB-209ENST00000552009 CEP170Q5SW79 1584 aa12.18□□□□□ -0.46
GNPTAB-209ENST00000552009 TRIM32Q13049 653 aa12.18□□□□□ -0.46
GNPTAB-209ENST00000552009 SYMPKQ92797 1274 aaKnown RBP12.18□□□□□ -0.46
GNPTAB-209ENST00000552009 ZNF787Q6DD87 383 aa12.16□□□□□ -0.46
GNPTAB-209ENST00000552009 PARP9Q8IXQ6 854 aa12.16□□□□□ -0.46
GNPTAB-209ENST00000552009 TTC24A2A3L6 582 aaPredicted RBP12.15□□□□□ -0.46
GNPTAB-209ENST00000552009 MYT1Q01538 1121 aa12.15□□□□□ -0.46
GNPTAB-209ENST00000552009 MOXD2PA6NHM9 499 aa12.14□□□□□ -0.47
GNPTAB-209ENST00000552009 SPDYE5A6NIY4 337 aa12.14□□□□□ -0.47
GNPTAB-209ENST00000552009 NDUFV2P19404 249 aa12.14□□□□□ -0.47
GNPTAB-209ENST00000552009 PCDHGC3Q9UN70 934 aa12.14□□□□□ -0.47
GNPTAB-209ENST00000552009 NUP160Q12769 1436 aa12.13□□□□□ -0.47
GNPTAB-209ENST00000552009 WNT7AO00755 349 aa12.13□□□□□ -0.47
GNPTAB-209ENST00000552009 NUDT12Q9BQG2 462 aa12.13□□□□□ -0.47
GNPTAB-209ENST00000552009 FHAD1B1AJZ9 1412 aa12.12□□□□□ -0.47
GNPTAB-209ENST00000552009 MS4A1P11836 297 aa12.12□□□□□ -0.47
GNPTAB-209ENST00000552009 MTMR2Q13614 643 aa12.12□□□□□ -0.47
GNPTAB-209ENST00000552009 TBC1D2Q9BYX2 928 aa12.12□□□□□ -0.47
GNPTAB-209ENST00000552009 GJA5P36382 358 aa12.11□□□□□ -0.47
GNPTAB-209ENST00000552009 TOR4AQ9NXH8 423 aa12.11□□□□□ -0.47
GNPTAB-209ENST00000552009 WNT7BP56706 349 aa12.1□□□□□ -0.47
GNPTAB-209ENST00000552009 SNIP1Q8TAD8 396 aaKnown RBP12.1□□□□□ -0.47
GNPTAB-209ENST00000552009 ERICH3Q5RHP9 1530 aa12.1□□□□□ -0.47
GNPTAB-209ENST00000552009 PDE4DQ08499 809 aa12.09□□□□□ -0.47
GNPTAB-209ENST00000552009 CCNYL3P0C7X3 344 aa12.08□□□□□ -0.48
GNPTAB-209ENST00000552009 PRR7Q8TB68 274 aa12.08□□□□□ -0.48
GNPTAB-209ENST00000552009 SLC24A3Q9HC58 644 aa12.08□□□□□ -0.48
GNPTAB-209ENST00000552009 SHROOM2Q13796 1616 aa12.08□□□□□ -0.48
GNPTAB-209ENST00000552009 PTPRNQ16849 979 aa12.07□□□□□ -0.48
GNPTAB-209ENST00000552009 RSBN1LQ6PCB5 846 aaPredicted RBP12.07□□□□□ -0.48
GNPTAB-209ENST00000552009 BCANQ96GW7 911 aa12.07□□□□□ -0.48
GNPTAB-209ENST00000552009 PRG4Q92954 1404 aaPredicted RBP12.06□□□□□ -0.48
GNPTAB-209ENST00000552009 MRGPRX2Q96LB1 330 aa12.06□□□□□ -0.48
GNPTAB-209ENST00000552009 RC3H1Q5TC82 1133 aaKnown RBP12.05□□□□□ -0.48
GNPTAB-209ENST00000552009 DESI1Q6ICB0 168 aa12.05□□□□□ -0.48
GNPTAB-209ENST00000552009 SPTLC1O15269 473 aa12.04□□□□□ -0.48
GNPTAB-209ENST00000552009 CTC1Q2NKJ3 1217 aa12.04□□□□□ -0.48
GNPTAB-209ENST00000552009 RIC3Q7Z5B4 369 aa12.04□□□□□ -0.48
GNPTAB-209ENST00000552009 AAASQ9NRG9 546 aa12.04□□□□□ -0.48
GNPTAB-209ENST00000552009 RUSC2Q8N2Y8 1516 aa12.04□□□□□ -0.48
GNPTAB-209ENST00000552009 AXIN1O15169 862 aa12.03□□□□□ -0.48
GNPTAB-209ENST00000552009 ST8SIA5O15466 376 aa12.03□□□□□ -0.48
GNPTAB-209ENST00000552009 AVPP01185 164 aa12.03□□□□□ -0.48
GNPTAB-209ENST00000552009 ZBTB3Q9H5J0 574 aa12.03□□□□□ -0.48
GNPTAB-209ENST00000552009 CRIPAKQ8N1N5 446 aa12.02□□□□□ -0.49
GNPTAB-209ENST00000552009 SLC24A1O60721 1099 aa12.01□□□□□ -0.49
GNPTAB-209ENST00000552009 PRPF38BQ5VTL8 546 aaKnown RBP12.01□□□□□ -0.49
GNPTAB-209ENST00000552009 EVA1BQ9NVM1 165 aa12.01□□□□□ -0.49
GNPTAB-209ENST00000552009 SKOR1P84550 965 aa12□□□□□ -0.49
GNPTAB-209ENST00000552009 PTCRAQ6ISU1 281 aaPredicted RBP12□□□□□ -0.49
GNPTAB-209ENST00000552009 EHBP1Q8NDI1 1231 aa12□□□□□ -0.49
GNPTAB-209ENST00000552009 KCNH2Q12809 1159 aa11.99□□□□□ -0.49
GNPTAB-209ENST00000552009 PCDHB15Q9Y5E8 787 aa11.99□□□□□ -0.49
GNPTAB-209ENST00000552009 IGF1RP08069 1367 aa11.98□□□□□ -0.49
GNPTAB-209ENST00000552009 TTBK1Q5TCY1 1321 aaPredicted RBP11.98□□□□□ -0.49
GNPTAB-209ENST00000552009 SMPD1P17405 629 aa11.98□□□□□ -0.49
GNPTAB-209ENST00000552009 CSPP1Q1MSJ5 1256 aa11.98□□□□□ -0.49
GNPTAB-209ENST00000552009 RSPH6AQ9H0K4 717 aa11.98□□□□□ -0.49
GNPTAB-209ENST00000552009 UNC93B1Q9H1C4 597 aa11.98□□□□□ -0.49
GNPTAB-209ENST00000552009 NUTM2BA6NNL0 878 aaPredicted RBP11.97□□□□□ -0.49
GNPTAB-209ENST00000552009 NUTM2EB1AL46 878 aaPredicted RBP11.97□□□□□ -0.49
GNPTAB-209ENST00000552009 HRCP23327 699 aa11.97□□□□□ -0.49
GNPTAB-209ENST00000552009 CTHP32929 405 aa11.97□□□□□ -0.49
GNPTAB-209ENST00000552009 SMCPP49901 116 aaPredicted RBP11.97□□□□□ -0.49
GNPTAB-209ENST00000552009 NUTM2DQ5VT03 806 aaPredicted RBP11.97□□□□□ -0.49
GNPTAB-209ENST00000552009 NUTM2AQ8IVF1 878 aaPredicted RBP11.97□□□□□ -0.49
GNPTAB-209ENST00000552009 KIF27Q86VH2 1401 aa11.96□□□□□ -0.49
GNPTAB-209ENST00000552009 J3QL48 77 aa11.96□□□□□ -0.49
GNPTAB-209ENST00000552009 ALDH1A1P00352 501 aa11.95□□□□□ -0.5
GNPTAB-209ENST00000552009 MYSM1Q5VVJ2 828 aa11.95□□□□□ -0.5
GNPTAB-209ENST00000552009 LYPD8Q6UX82 237 aa11.95□□□□□ -0.5
GNPTAB-209ENST00000552009 ADCY10Q96PN6 1610 aa11.93□□□□□ -0.5
GNPTAB-209ENST00000552009 KIF13AQ9H1H9 1805 aa11.93□□□□□ -0.5
GNPTAB-209ENST00000552009 CFAP99D6REC4 459 aa11.93□□□□□ -0.5
GNPTAB-209ENST00000552009 SH3BP2P78314 561 aa11.93□□□□□ -0.5
GNPTAB-209ENST00000552009 TUSC1Q2TAM9 212 aa11.93□□□□□ -0.5
GNPTAB-209ENST00000552009 CABLES1Q8TDN4 633 aa11.93□□□□□ -0.5
GNPTAB-209ENST00000552009 BAP1Q92560 729 aa11.93□□□□□ -0.5
GNPTAB-209ENST00000552009 TSC1Q92574 1164 aa11.93□□□□□ -0.5
GNPTAB-209ENST00000552009 KIAA0586Q9BVV6 1533 aa11.92□□□□□ -0.5
GNPTAB-209ENST00000552009 CUL7Q14999 1698 aa11.92□□□□□ -0.5
GNPTAB-209ENST00000552009 LINC01559Q495D7 138 aa11.92□□□□□ -0.5
GNPTAB-209ENST00000552009 WASF2Q9Y6W5 498 aa11.92□□□□□ -0.5
GNPTAB-209ENST00000552009 POTECB2RU33 542 aa11.91□□□□□ -0.5
GNPTAB-209ENST00000552009 LIMD1Q9UGP4 676 aa11.91□□□□□ -0.5
GNPTAB-209ENST00000552009 FAM69CQ0P6D2 419 aa11.9□□□□□ -0.5
GNPTAB-209ENST00000552009 ZNF511Q8NB15 262 aa11.9□□□□□ -0.5
GNPTAB-209ENST00000552009 HELBQ8NG08 1087 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms