RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 NGDNQ8NEJ9 315 aaKnown RBP20.87■□□□□ 0.93
CHMP1A-210ENST00000551981 ITSN1Q15811 1721 aa20.87■□□□□ 0.93
CHMP1A-210ENST00000551981 RAB3GAP2Q9H2M9 1393 aa20.86■□□□□ 0.93
CHMP1A-210ENST00000551981 PRR36Q9H6K5 1346 aa20.86■□□□□ 0.93
CHMP1A-210ENST00000551981 WASLO00401 505 aaPredicted RBP20.86■□□□□ 0.93
CHMP1A-210ENST00000551981 CRYBG1Q9Y4K1 1723 aa20.86■□□□□ 0.93
CHMP1A-210ENST00000551981 PAK3O75914 559 aaPredicted RBP20.85■□□□□ 0.93
CHMP1A-210ENST00000551981 SPATA31A5Q5VU36 1347 aa20.84■□□□□ 0.93
CHMP1A-210ENST00000551981 SPATA31A7Q8IWB4 1347 aa20.84■□□□□ 0.93
CHMP1A-210ENST00000551981 DCAF11Q8TEB1 546 aa20.84■□□□□ 0.93
CHMP1A-210ENST00000551981 STAC3Q96MF2 364 aa20.84■□□□□ 0.93
CHMP1A-210ENST00000551981 KDM2AQ9Y2K7 1162 aa20.84■□□□□ 0.93
CHMP1A-210ENST00000551981 PRDM11Q9NQV5 511 aa20.83■□□□□ 0.93
CHMP1A-210ENST00000551981 THSD7AQ9UPZ6 1657 aa20.83■□□□□ 0.92
CHMP1A-210ENST00000551981 PSDA5PKW4 1024 aaPredicted RBP20.82■□□□□ 0.92
CHMP1A-210ENST00000551981 ARHGEF28Q8N1W1 1705 aaKnown RBP20.81■□□□□ 0.92
CHMP1A-210ENST00000551981 HRCP23327 699 aa20.8■□□□□ 0.92
CHMP1A-210ENST00000551981 EN1Q05925 392 aaPredicted RBP20.79■□□□□ 0.92
CHMP1A-210ENST00000551981 TNS1Q9HBL0 1735 aaKnown RBP20.78■□□□□ 0.92
CHMP1A-210ENST00000551981 ATP7BP35670 1465 aa20.78■□□□□ 0.92
CHMP1A-210ENST00000551981 FAM182BQ5T319 152 aa20.78■□□□□ 0.92
CHMP1A-210ENST00000551981 PHRF1Q9P1Y6 1649 aaKnown RBP20.78■□□□□ 0.92
CHMP1A-210ENST00000551981 DISP2A7MBM2 1401 aa20.78■□□□□ 0.92
CHMP1A-210ENST00000551981 KIAA0232Q92628 1395 aa20.77■□□□□ 0.92
CHMP1A-210ENST00000551981 NUDT16Q96DE0 195 aaKnown RBP20.77■□□□□ 0.92
CHMP1A-210ENST00000551981 SPATA31A1Q5TZJ5 1347 aa20.76■□□□□ 0.91
CHMP1A-210ENST00000551981 STRN4Q9NRL3 753 aa20.74■□□□□ 0.91
CHMP1A-210ENST00000551981 R3HDM1Q15032 1099 aaKnown RBP20.73■□□□□ 0.91
CHMP1A-210ENST00000551981 FAM196AQ6ZSG2 479 aa20.73■□□□□ 0.91
CHMP1A-210ENST00000551981 CHRNA2Q15822 529 aa20.72■□□□□ 0.91
CHMP1A-210ENST00000551981 TOPAZ1Q8N9V7 1692 aa20.72■□□□□ 0.91
CHMP1A-210ENST00000551981 ZC3H6P61129 1189 aaKnown RBP20.71■□□□□ 0.91
CHMP1A-210ENST00000551981 CDK19Q9BWU1 502 aa20.71■□□□□ 0.91
CHMP1A-210ENST00000551981 POLR3AO14802 1390 aaPredicted RBP20.71■□□□□ 0.91
CHMP1A-210ENST00000551981 EVA1CP58658 441 aa20.7■□□□□ 0.9
CHMP1A-210ENST00000551981 EZH2Q15910 746 aaKnown RBP20.7■□□□□ 0.9
CHMP1A-210ENST00000551981 PARD3Q8TEW0 1356 aa20.7■□□□□ 0.9
CHMP1A-210ENST00000551981 TRIM37O94972 964 aa20.69■□□□□ 0.9
CHMP1A-210ENST00000551981 NUTM2GQ5VZR2 741 aa20.69■□□□□ 0.9
CHMP1A-210ENST00000551981 KIAA1210Q9ULL0 1709 aa20.68■□□□□ 0.9
CHMP1A-210ENST00000551981 NBPF8Q3BBV2 869 aa20.68■□□□□ 0.9
CHMP1A-210ENST00000551981 USP35Q9P2H5 1018 aa20.68■□□□□ 0.9
CHMP1A-210ENST00000551981 CCDC61Q9Y6R9 512 aa20.68■□□□□ 0.9
CHMP1A-210ENST00000551981 ACEP12821 1306 aa20.68■□□□□ 0.9
CHMP1A-210ENST00000551981 SSH2Q76I76 1423 aa20.68■□□□□ 0.9
CHMP1A-210ENST00000551981 NRKQ7Z2Y5 1582 aa20.68■□□□□ 0.9
CHMP1A-210ENST00000551981 PDE3BQ13370 1112 aa20.67■□□□□ 0.9
CHMP1A-210ENST00000551981 BARGINQ6ZT62 677 aa20.67■□□□□ 0.9
CHMP1A-210ENST00000551981 CAMKK2Q96RR4 588 aa20.67■□□□□ 0.9
CHMP1A-210ENST00000551981 APBA3O96018 575 aa20.66■□□□□ 0.9
CHMP1A-210ENST00000551981 PLEKHG3A1L390 1219 aa20.65■□□□□ 0.9
CHMP1A-210ENST00000551981 ABTB2Q8N961 1025 aa20.65■□□□□ 0.9
CHMP1A-210ENST00000551981 CPDO75976 1380 aa20.64■□□□□ 0.89
CHMP1A-210ENST00000551981 TCP11L2Q8N4U5 519 aa20.63■□□□□ 0.89
CHMP1A-210ENST00000551981 LMO7Q8WWI1 1683 aa20.63■□□□□ 0.89
CHMP1A-210ENST00000551981 RREB1Q92766 1687 aa20.63■□□□□ 0.89
CHMP1A-210ENST00000551981 CAMTA1Q9Y6Y1 1673 aa20.63■□□□□ 0.89
CHMP1A-210ENST00000551981 LARP1Q6PKG0 1096 aaKnown RBP20.62■□□□□ 0.89
CHMP1A-210ENST00000551981 USP19O94966 1318 aa20.61■□□□□ 0.89
CHMP1A-210ENST00000551981 THRAP3Q9Y2W1 955 aaKnown RBP20.61■□□□□ 0.89
CHMP1A-210ENST00000551981 NBPF14Q5TI25 921 aa20.6■□□□□ 0.89
CHMP1A-210ENST00000551981 NLRP13Q86W25 1043 aa20.6■□□□□ 0.89
CHMP1A-210ENST00000551981 NUP188Q5SRE5 1749 aa20.6■□□□□ 0.89
CHMP1A-210ENST00000551981 PPIP5K1Q6PFW1 1433 aa20.6■□□□□ 0.89
CHMP1A-210ENST00000551981 SRPK2P78362 688 aaKnown RBP20.59■□□□□ 0.89
CHMP1A-210ENST00000551981 BRD4O60885 1362 aaPredicted RBP20.59■□□□□ 0.89
CHMP1A-210ENST00000551981 PARP4Q9UKK3 1724 aaKnown RBP20.58■□□□□ 0.89
CHMP1A-210ENST00000551981 C11orf95C9JLR9 678 aaPredicted RBP20.58■□□□□ 0.89
CHMP1A-210ENST00000551981 GCP02774 474 aa20.57■□□□□ 0.88
CHMP1A-210ENST00000551981 COL5A2P05997 1499 aaPredicted RBP20.56■□□□□ 0.88
CHMP1A-210ENST00000551981 CENPJQ9HC77 1338 aaPredicted RBP20.56■□□□□ 0.88
CHMP1A-210ENST00000551981 CRB1P82279 1406 aa20.54■□□□□ 0.88
CHMP1A-210ENST00000551981 NBPF1Q3BBV0 1214 aa20.54■□□□□ 0.88
CHMP1A-210ENST00000551981 QRICH2Q9H0J4 1663 aa20.54■□□□□ 0.88
CHMP1A-210ENST00000551981 CABP2Q9NPB3 220 aa20.53■□□□□ 0.88
CHMP1A-210ENST00000551981 ZBTB7CA1YPR0 619 aa20.52■□□□□ 0.88
CHMP1A-210ENST00000551981 OVOS2A0A0G2JMS6 1433 aa20.52■□□□□ 0.87
CHMP1A-210ENST00000551981 OVOS2A0A0J9YW53 1432 aa20.52■□□□□ 0.87
CHMP1A-210ENST00000551981 OVOS2Q6IE36 1432 aa20.52■□□□□ 0.87
CHMP1A-210ENST00000551981 RGPD3A6NKT7 1758 aaPredicted RBP20.51■□□□□ 0.87
CHMP1A-210ENST00000551981 RGPD4Q7Z3J3 1758 aa20.51■□□□□ 0.87
CHMP1A-210ENST00000551981 AATKQ6ZMQ8 1374 aa20.5■□□□□ 0.87
CHMP1A-210ENST00000551981 NLRP6P59044 892 aa20.5■□□□□ 0.87
CHMP1A-210ENST00000551981 USP6P35125 1406 aa20.5■□□□□ 0.87
CHMP1A-210ENST00000551981 PEAK1Q9H792 1746 aa20.5■□□□□ 0.87
CHMP1A-210ENST00000551981 SLIT3O75094 1523 aa20.49■□□□□ 0.87
CHMP1A-210ENST00000551981 SPON1Q9HCB6 807 aa20.49■□□□□ 0.87
CHMP1A-210ENST00000551981 PPP1R1BQ9UD71 204 aaPredicted RBP20.49■□□□□ 0.87
CHMP1A-210ENST00000551981 LRRC37A3O60309 1634 aa20.49■□□□□ 0.87
CHMP1A-210ENST00000551981 CABP1Q9NZU7 370 aa20.48■□□□□ 0.87
CHMP1A-210ENST00000551981 SBF2Q86WG5 1849 aa20.48■□□□□ 0.87
CHMP1A-210ENST00000551981 DDB1Q16531 1140 aa20.47■□□□□ 0.87
CHMP1A-210ENST00000551981 WNK3Q9BYP7 1800 aa20.46■□□□□ 0.87
CHMP1A-210ENST00000551981 TOM1L2Q6ZVM7 507 aa20.46■□□□□ 0.87
CHMP1A-210ENST00000551981 PIK3C2AO00443 1686 aa20.45■□□□□ 0.86
CHMP1A-210ENST00000551981 DCAF8L1A6NGE4 600 aa20.45■□□□□ 0.86
CHMP1A-210ENST00000551981 KCNQ2O43526 872 aa20.45■□□□□ 0.86
CHMP1A-210ENST00000551981 COL18A1P39060 1754 aa20.44■□□□□ 0.86
CHMP1A-210ENST00000551981 PLSCR1O15162 318 aa20.44■□□□□ 0.86
CHMP1A-210ENST00000551981 EVC2Q86UK5 1308 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms