RNA–Protein interactions for RNA: ENST00000551787.5

BRF1-219, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-219ENST00000551787 BCL9LQ86UU0 1499 aa23.68■■□□□ 1.38
BRF1-219ENST00000551787 FAM83GA6ND36 823 aa23.68■■□□□ 1.38
BRF1-219ENST00000551787 UNC5CLQ8IV45 518 aa23.66■■□□□ 1.38
BRF1-219ENST00000551787 ABTB2Q8N961 1025 aa23.66■■□□□ 1.38
BRF1-219ENST00000551787 CLSPNQ9HAW4 1339 aa23.65■■□□□ 1.38
BRF1-219ENST00000551787 TOPAZ1Q8N9V7 1692 aa23.65■■□□□ 1.38
BRF1-219ENST00000551787 ST20-MTHFSA0A0A6YYL1 179 aa23.64■■□□□ 1.37
BRF1-219ENST00000551787 ALS2Q96Q42 1657 aa23.64■■□□□ 1.37
BRF1-219ENST00000551787 ATRNO75882 1429 aa23.62■■□□□ 1.37
BRF1-219ENST00000551787 SLIT2O94813 1529 aa23.61■■□□□ 1.37
BRF1-219ENST00000551787 GJD4Q96KN9 370 aaPredicted RBP23.61■■□□□ 1.37
BRF1-219ENST00000551787 TIMELESSQ9UNS1 1208 aa23.61■■□□□ 1.37
BRF1-219ENST00000551787 MARF1Q9Y4F3 1742 aaKnown RBP23.61■■□□□ 1.37
BRF1-219ENST00000551787 ZC3H6P61129 1189 aaKnown RBP23.6■■□□□ 1.37
BRF1-219ENST00000551787 BTG4Q9NY30 223 aa23.6■■□□□ 1.37
BRF1-219ENST00000551787 TMC1Q8TDI8 760 aa23.59■■□□□ 1.37
BRF1-219ENST00000551787 PRDM11Q9NQV5 511 aa23.59■■□□□ 1.37
BRF1-219ENST00000551787 CCDC9Q9Y3X0 531 aaKnown RBP23.59■■□□□ 1.37
BRF1-219ENST00000551787 SBNO2Q9Y2G9 1366 aa23.59■■□□□ 1.37
BRF1-219ENST00000551787 RGS12O14924 1447 aa23.59■■□□□ 1.37
BRF1-219ENST00000551787 ATAD2Q6PL18 1390 aa23.58■■□□□ 1.37
BRF1-219ENST00000551787 CHRNA2Q15822 529 aa23.58■■□□□ 1.37
BRF1-219ENST00000551787 TESK2Q96S53 571 aa23.58■■□□□ 1.37
BRF1-219ENST00000551787 CDK12Q9NYV4 1490 aaPredicted RBP23.57■■□□□ 1.36
BRF1-219ENST00000551787 USP6P35125 1406 aa23.57■■□□□ 1.36
BRF1-219ENST00000551787 ABCA3Q99758 1704 aa23.56■■□□□ 1.36
BRF1-219ENST00000551787 KIAA0232Q92628 1395 aa23.56■■□□□ 1.36
BRF1-219ENST00000551787 NLRP6P59044 892 aa23.56■■□□□ 1.36
BRF1-219ENST00000551787 NLRP13Q86W25 1043 aa23.56■■□□□ 1.36
BRF1-219ENST00000551787 ZNF692Q9BU19 519 aaPredicted RBP23.56■■□□□ 1.36
BRF1-219ENST00000551787 VPS72Q15906 364 aa23.55■■□□□ 1.36
BRF1-219ENST00000551787 SLC12A5Q9H2X9 1139 aa23.55■■□□□ 1.36
BRF1-219ENST00000551787 USP47Q96K76 1375 aa23.53■■□□□ 1.36
BRF1-219ENST00000551787 TTC21BQ7Z4L5 1316 aa23.53■■□□□ 1.36
BRF1-219ENST00000551787 SSH2Q76I76 1423 aa23.51■■□□□ 1.35
BRF1-219ENST00000551787 ZBTB7CA1YPR0 619 aa23.51■■□□□ 1.35
BRF1-219ENST00000551787 GCP02774 474 aa23.51■■□□□ 1.35
BRF1-219ENST00000551787 UPF1Q92900 1129 aaKnown RBP eCLIP23.51■■□□□ 1.353e-7■■■■■ 30.9
BRF1-219ENST00000551787 USP19O94966 1318 aa23.51■■□□□ 1.35
BRF1-219ENST00000551787 BRD4O60885 1362 aaPredicted RBP23.51■■□□□ 1.35
BRF1-219ENST00000551787 KTN1Q86UP2 1357 aaKnown RBP23.51■■□□□ 1.35
BRF1-219ENST00000551787 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.5■■□□□ 1.35
BRF1-219ENST00000551787 CPSF1Q10570 1443 aaKnown RBP23.5■■□□□ 1.35
BRF1-219ENST00000551787 STRN4Q9NRL3 753 aa23.49■■□□□ 1.35
BRF1-219ENST00000551787 PLCH1Q4KWH8 1693 aa23.48■■□□□ 1.35
BRF1-219ENST00000551787 CRYBG1Q9Y4K1 1723 aa23.48■■□□□ 1.35
BRF1-219ENST00000551787 SOX12O15370 315 aa23.48■■□□□ 1.35
BRF1-219ENST00000551787 ZRANB1Q9UGI0 708 aa23.47■■□□□ 1.35
BRF1-219ENST00000551787 GLI3P10071 1580 aa23.46■■□□□ 1.35
BRF1-219ENST00000551787 HDGFL2Q7Z4V5 671 aaPredicted RBP23.46■■□□□ 1.35
BRF1-219ENST00000551787 SEPT12Q8IYM1 358 aa23.46■■□□□ 1.35
BRF1-219ENST00000551787 PUS7Q96PZ0 661 aaKnown RBP23.46■■□□□ 1.35
BRF1-219ENST00000551787 COL14A1Q05707 1796 aaKnown RBP23.45■■□□□ 1.34
BRF1-219ENST00000551787 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.45■■□□□ 1.34
BRF1-219ENST00000551787 EVA1CP58658 441 aa23.45■■□□□ 1.34
BRF1-219ENST00000551787 TMF1P82094 1093 aa23.45■■□□□ 1.34
BRF1-219ENST00000551787 TTC21AQ8NDW8 1320 aa23.44■■□□□ 1.34
BRF1-219ENST00000551787 A0A0G2JS52 829 aa23.44■■□□□ 1.34
BRF1-219ENST00000551787 SLC24A1O60721 1099 aa23.44■■□□□ 1.34
BRF1-219ENST00000551787 MYT1Q01538 1121 aa23.44■■□□□ 1.34
BRF1-219ENST00000551787 FAM98CQ17RN3 349 aaKnown RBP23.44■■□□□ 1.34
BRF1-219ENST00000551787 NME9Q86XW9 330 aa23.44■■□□□ 1.34
BRF1-219ENST00000551787 TERF2IPQ9NYB0 399 aa23.44■■□□□ 1.34
BRF1-219ENST00000551787 NWD2Q9ULI1 1742 aa23.44■■□□□ 1.34
BRF1-219ENST00000551787 PHRF1Q9P1Y6 1649 aaKnown RBP23.44■■□□□ 1.34
BRF1-219ENST00000551787 CD163L1Q9NR16 1453 aa23.43■■□□□ 1.34
BRF1-219ENST00000551787 CPDO75976 1380 aa23.41■■□□□ 1.34
BRF1-219ENST00000551787 SPATA31A5Q5VU36 1347 aa23.41■■□□□ 1.34
BRF1-219ENST00000551787 SPATA31A7Q8IWB4 1347 aa23.41■■□□□ 1.34
BRF1-219ENST00000551787 NRKQ7Z2Y5 1582 aa23.41■■□□□ 1.34
BRF1-219ENST00000551787 ONECUT3O60422 494 aaPredicted RBP23.41■■□□□ 1.34
BRF1-219ENST00000551787 USP35Q9P2H5 1018 aa23.41■■□□□ 1.34
BRF1-219ENST00000551787 A0A1W2PP64 1363 aa23.4■■□□□ 1.34
BRF1-219ENST00000551787 AKAP12Q02952 1782 aa23.4■■□□□ 1.34
BRF1-219ENST00000551787 PIK3C2AO00443 1686 aa23.4■■□□□ 1.34
BRF1-219ENST00000551787 NRAPQ86VF7 1730 aa23.39■■□□□ 1.34
BRF1-219ENST00000551787 LARP1Q6PKG0 1096 aaKnown RBP23.39■■□□□ 1.33
BRF1-219ENST00000551787 CAMTA1Q9Y6Y1 1673 aa23.37■■□□□ 1.33
BRF1-219ENST00000551787 EP400Q96L91 3159 aa23.37■■□□□ 1.33
BRF1-219ENST00000551787 SPATA31A1Q5TZJ5 1347 aa23.36■■□□□ 1.33
BRF1-219ENST00000551787 KCNH5Q8NCM2 988 aa23.36■■□□□ 1.33
BRF1-219ENST00000551787 SLIT3O75094 1523 aa23.35■■□□□ 1.33
BRF1-219ENST00000551787 ARHGEF25Q86VW2 580 aa23.35■■□□□ 1.33
BRF1-219ENST00000551787 AXIN2Q9Y2T1 843 aa23.35■■□□□ 1.33
BRF1-219ENST00000551787 KRT27Q7Z3Y8 459 aa23.34■■□□□ 1.33
BRF1-219ENST00000551787 EDC4Q6P2E9 1401 aaKnown RBP23.33■■□□□ 1.33
BRF1-219ENST00000551787 AATKQ6ZMQ8 1374 aa23.33■■□□□ 1.33
BRF1-219ENST00000551787 CDCA8Q53HL2 280 aa23.33■■□□□ 1.33
BRF1-219ENST00000551787 POLR3GLQ9BT43 218 aa23.33■■□□□ 1.33
BRF1-219ENST00000551787 MON2Q7Z3U7 1717 aa23.33■■□□□ 1.32
BRF1-219ENST00000551787 USP31Q70CQ4 1352 aa23.32■■□□□ 1.32
BRF1-219ENST00000551787 NINLQ9Y2I6 1382 aa23.32■■□□□ 1.32
BRF1-219ENST00000551787 HSPA5P11021 654 aaKnown RBP23.32■■□□□ 1.32
BRF1-219ENST00000551787 EIF4G2P78344 907 aaKnown RBP eCLIP23.32■■□□□ 1.321e-6■■■■■ 36.9
BRF1-219ENST00000551787 FAM182BQ5T319 152 aa23.31■■□□□ 1.32
BRF1-219ENST00000551787 COL5A2P05997 1499 aaPredicted RBP23.29■■□□□ 1.32
BRF1-219ENST00000551787 LMO7Q8WWI1 1683 aa23.28■■□□□ 1.32
BRF1-219ENST00000551787 ANKRD36BQ8N2N9 1353 aa23.28■■□□□ 1.32
BRF1-219ENST00000551787 TOM1L2Q6ZVM7 507 aa23.28■■□□□ 1.32
BRF1-219ENST00000551787 TCP11L2Q8N4U5 519 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms