RNA–Protein interactions for RNA: ENST00000551765.5

GATC-203, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GATC, Length 4,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-203ENST00000551765 HSP90B1P14625 803 aaKnown RBP16.4■□□□□ 0.22
GATC-203ENST00000551765 NFE2L2Q16236 605 aa16.4■□□□□ 0.22
GATC-203ENST00000551765 SAMD9Q5K651 1589 aa16.39■□□□□ 0.22
GATC-203ENST00000551765 AAMPQ13685 434 aa16.39■□□□□ 0.21
GATC-203ENST00000551765 DIAPH3Q9NSV4 1193 aa16.39■□□□□ 0.21
GATC-203ENST00000551765 ZRANB1Q9UGI0 708 aa16.39■□□□□ 0.21
GATC-203ENST00000551765 ATAD2Q6PL18 1390 aa16.39■□□□□ 0.21
GATC-203ENST00000551765 DNMT1P26358 1616 aaKnown RBP16.39■□□□□ 0.21
GATC-203ENST00000551765 ESCO1Q5FWF5 840 aa16.39■□□□□ 0.21
GATC-203ENST00000551765 GPATCH3Q96I76 525 aa16.39■□□□□ 0.21
GATC-203ENST00000551765 SMARCA5O60264 1052 aaPredicted RBP16.38■□□□□ 0.21
GATC-203ENST00000551765 UBTFL1P0CB47 393 aaPredicted RBP16.38■□□□□ 0.21
GATC-203ENST00000551765 EIF4G3O43432 1585 aaKnown RBP16.38■□□□□ 0.21
GATC-203ENST00000551765 FYB1O15117 783 aa16.38■□□□□ 0.21
GATC-203ENST00000551765 MAP4K4O95819 1239 aaPredicted RBP16.38■□□□□ 0.21
GATC-203ENST00000551765 NEK4P51957 841 aa16.38■□□□□ 0.21
GATC-203ENST00000551765 KDM5BQ9UGL1 1544 aa16.37■□□□□ 0.21
GATC-203ENST00000551765 F6X3S4 739 aa16.37■□□□□ 0.21
GATC-203ENST00000551765 NLRP2Q9NX02 1062 aa16.37■□□□□ 0.21
GATC-203ENST00000551765 SPATA31E1Q6ZUB1 1445 aa16.37■□□□□ 0.21
GATC-203ENST00000551765 EXOC6BQ9Y2D4 811 aa16.37■□□□□ 0.21
GATC-203ENST00000551765 TAF7LQ5H9L4 462 aa16.37■□□□□ 0.21
GATC-203ENST00000551765 IL1RAPL2Q9NP60 686 aa16.36■□□□□ 0.21
GATC-203ENST00000551765 A2MP01023 1474 aa16.36■□□□□ 0.21
GATC-203ENST00000551765 NCKAP5LQ9HCH0 1330 aa16.36■□□□□ 0.21
GATC-203ENST00000551765 IFIT2P09913 472 aaKnown RBP16.35■□□□□ 0.21
GATC-203ENST00000551765 HDGFL1Q5TGJ6 251 aa16.35■□□□□ 0.21
GATC-203ENST00000551765 USHBP1Q8N6Y0 703 aa16.35■□□□□ 0.21
GATC-203ENST00000551765 RNF214Q8ND24 703 aa16.35■□□□□ 0.21
GATC-203ENST00000551765 ITSN2Q9NZM3 1697 aa16.35■□□□□ 0.21
GATC-203ENST00000551765 CFAP65Q6ZU64 1925 aaKnown RBP16.35■□□□□ 0.21
GATC-203ENST00000551765 SEC24BO95487 1268 aa16.34■□□□□ 0.21
GATC-203ENST00000551765 GCC1Q96CN9 775 aa16.34■□□□□ 0.21
GATC-203ENST00000551765 TBC1D2Q9BYX2 928 aa16.33■□□□□ 0.21
GATC-203ENST00000551765 PTMSP20962 102 aa16.33■□□□□ 0.2
GATC-203ENST00000551765 ZNF692Q9BU19 519 aaPredicted RBP16.33■□□□□ 0.2
GATC-203ENST00000551765 FOSBP53539 338 aa16.32■□□□□ 0.2
GATC-203ENST00000551765 SYAP1Q96A49 352 aaPredicted RBP16.32■□□□□ 0.2
GATC-203ENST00000551765 CHMP4AQ9BY43 222 aa16.32■□□□□ 0.2
GATC-203ENST00000551765 VPS37CA5D8V6 355 aaPredicted RBP16.32■□□□□ 0.2
GATC-203ENST00000551765 CT47B1P0C2W7 299 aaPredicted RBP16.32■□□□□ 0.2
GATC-203ENST00000551765 NEXNQ0ZGT2 675 aa16.32■□□□□ 0.2
GATC-203ENST00000551765 TTC5Q8N0Z6 440 aa16.32■□□□□ 0.2
GATC-203ENST00000551765 TULP1O00294 542 aaPredicted RBP16.31■□□□□ 0.2
GATC-203ENST00000551765 C8orf34Q49A92 452 aa16.31■□□□□ 0.2
GATC-203ENST00000551765 CAVIN1Q6NZI2 390 aaKnown RBP16.31■□□□□ 0.2
GATC-203ENST00000551765 CCDC30Q5VVM6 783 aa16.31■□□□□ 0.2
GATC-203ENST00000551765 GNL2Q13823 731 aaKnown RBP16.31■□□□□ 0.2
GATC-203ENST00000551765 MPNDQ8N594 471 aa16.31■□□□□ 0.2
GATC-203ENST00000551765 GAS2L2Q8NHY3 880 aa16.31■□□□□ 0.2
GATC-203ENST00000551765 WASLO00401 505 aaPredicted RBP16.3■□□□□ 0.2
GATC-203ENST00000551765 ASXL2Q76L83 1435 aa16.3■□□□□ 0.2
GATC-203ENST00000551765 GNAI2P04899 355 aa16.3■□□□□ 0.2
GATC-203ENST00000551765 RIC3Q7Z5B4 369 aa16.3■□□□□ 0.2
GATC-203ENST00000551765 ASXL1Q8IXJ9 1541 aa16.3■□□□□ 0.2
GATC-203ENST00000551765 DUOX2Q9NRD8 1548 aa16.3■□□□□ 0.2
GATC-203ENST00000551765 KRT24Q2M2I5 525 aa16.3■□□□□ 0.2
GATC-203ENST00000551765 TSHZ3Q63HK5 1081 aa16.3■□□□□ 0.2
GATC-203ENST00000551765 RAPGEF4Q8WZA2 1011 aa16.3■□□□□ 0.2
GATC-203ENST00000551765 NUP160Q12769 1436 aa16.3■□□□□ 0.2
GATC-203ENST00000551765 PRPF40AO75400 957 aaKnown RBP16.29■□□□□ 0.2
GATC-203ENST00000551765 KIAA2012Q0VF49 1180 aa16.29■□□□□ 0.2
GATC-203ENST00000551765 G3BP1Q13283 466 aaKnown RBP eCLIP16.29■□□□□ 0.2
GATC-203ENST00000551765 HDAC5Q9UQL6 1122 aa16.29■□□□□ 0.2
GATC-203ENST00000551765 MCM4P33991 863 aa16.29■□□□□ 0.2
GATC-203ENST00000551765 SKOR2Q2VWA4 1001 aaPredicted RBP16.29■□□□□ 0.2
GATC-203ENST00000551765 AEBP1Q8IUX7 1158 aa16.29■□□□□ 0.2
GATC-203ENST00000551765 PBRM1Q86U86 1689 aa16.29■□□□□ 0.2
GATC-203ENST00000551765 CCDC27Q2M243 656 aa16.29■□□□□ 0.2
GATC-203ENST00000551765 SIL1Q9H173 461 aa16.29■□□□□ 0.2
GATC-203ENST00000551765 TOMM22Q9NS69 142 aa16.29■□□□□ 0.2
GATC-203ENST00000551765 MBIPQ9NS73 344 aa16.29■□□□□ 0.2
GATC-203ENST00000551765 GNAI3P08754 354 aa16.28■□□□□ 0.2
GATC-203ENST00000551765 HSP90AB2PQ58FF8 381 aa16.28■□□□□ 0.2
GATC-203ENST00000551765 SYTL4Q96C24 671 aaPredicted RBP16.28■□□□□ 0.2
GATC-203ENST00000551765 TSPYL6Q8N831 410 aa16.28■□□□□ 0.2
GATC-203ENST00000551765 PHACTR3Q96KR7 559 aa16.28■□□□□ 0.2
GATC-203ENST00000551765 ANO8Q9HCE9 1232 aaPredicted RBP16.28■□□□□ 0.2
GATC-203ENST00000551765 NINLQ9Y2I6 1382 aa16.28■□□□□ 0.2
GATC-203ENST00000551765 UHRF1BP1Q6BDS2 1440 aa16.28■□□□□ 0.2
GATC-203ENST00000551765 ZNF530Q6P9A1 599 aaPredicted RBP16.27■□□□□ 0.19
GATC-203ENST00000551765 ZKSCAN1P17029 563 aaPredicted RBP16.27■□□□□ 0.19
GATC-203ENST00000551765 NEUROD6Q96NK8 337 aa16.27■□□□□ 0.19
GATC-203ENST00000551765 COL17A1Q9UMD9 1497 aaPredicted RBP16.26■□□□□ 0.19
GATC-203ENST00000551765 TARBP1Q13395 1621 aaKnown RBP16.26■□□□□ 0.19
GATC-203ENST00000551765 NUCB2P80303 420 aa16.26■□□□□ 0.19
GATC-203ENST00000551765 ZC3H6P61129 1189 aaKnown RBP16.26■□□□□ 0.19
GATC-203ENST00000551765 UPF3BQ9BZI7 483 aaKnown RBP16.26■□□□□ 0.19
GATC-203ENST00000551765 ADGRL2O95490 1459 aa16.25■□□□□ 0.19
GATC-203ENST00000551765 CLASRPQ8N2M8 674 aaKnown RBP16.25■□□□□ 0.19
GATC-203ENST00000551765 DDX54Q8TDD1 881 aaKnown RBP16.25■□□□□ 0.19
GATC-203ENST00000551765 CEP170Q5SW79 1584 aa16.25■□□□□ 0.19
GATC-203ENST00000551765 K7ELQ4 463 aaPredicted RBP16.25■□□□□ 0.19
GATC-203ENST00000551765 NUTM1Q86Y26 1132 aa16.25■□□□□ 0.19
GATC-203ENST00000551765 SRGAP3O43295 1099 aa16.24■□□□□ 0.19
GATC-203ENST00000551765 MYL6BP14649 208 aa16.24■□□□□ 0.19
GATC-203ENST00000551765 C8orf58Q8NAV2 365 aa16.24■□□□□ 0.19
GATC-203ENST00000551765 ARHGEF12Q9NZN5 1544 aa16.24■□□□□ 0.19
GATC-203ENST00000551765 POLKQ9UBT6 870 aa16.24■□□□□ 0.19
GATC-203ENST00000551765 H3BQV1 296 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms