RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 KDM5BQ9UGL1 1544 aa15.03■□□□□ -0
NR4A1-215ENST00000550557 PZPP20742 1482 aa15.03■□□□□ -0
NR4A1-215ENST00000550557 NPHP3Q7Z494 1330 aa15.02■□□□□ -0
NR4A1-215ENST00000550557 RILPL2Q969X0 211 aa15.02■□□□□ -0
NR4A1-215ENST00000550557 APPP05067 770 aa15.02□□□□□ -0.01
NR4A1-215ENST00000550557 TCP11L2Q8N4U5 519 aa15.02□□□□□ -0.01
NR4A1-215ENST00000550557 NEUROD6Q96NK8 337 aa15.01□□□□□ -0.01
NR4A1-215ENST00000550557 C8orf37Q96NL8 207 aa15.01□□□□□ -0.01
NR4A1-215ENST00000550557 TMOD3Q9NYL9 352 aa15.01□□□□□ -0.01
NR4A1-215ENST00000550557 MARCH6O60337 910 aa15.01□□□□□ -0.01
NR4A1-215ENST00000550557 SYCP2Q9BX26 1530 aa15.01□□□□□ -0.01
NR4A1-215ENST00000550557 HDGFL1Q5TGJ6 251 aa15□□□□□ -0.01
NR4A1-215ENST00000550557 ANKRD45Q5TZF3 282 aa15□□□□□ -0.01
NR4A1-215ENST00000550557 CDCA7LQ96GN5 454 aa15□□□□□ -0.01
NR4A1-215ENST00000550557 ABCC10Q5T3U5 1492 aa15□□□□□ -0.01
NR4A1-215ENST00000550557 PTMAP06454 111 aaKnown RBP15□□□□□ -0.01
NR4A1-215ENST00000550557 HSP90AB4PQ58FF6 505 aa15□□□□□ -0.01
NR4A1-215ENST00000550557 KIF16BQ96L93 1317 aa14.99□□□□□ -0.01
NR4A1-215ENST00000550557 CEP170Q5SW79 1584 aa14.99□□□□□ -0.01
NR4A1-215ENST00000550557 STARD3NLO95772 234 aa14.99□□□□□ -0.01
NR4A1-215ENST00000550557 NCBP3Q53F19 620 aaKnown RBP14.99□□□□□ -0.01
NR4A1-215ENST00000550557 C19orf44Q9H6X5 657 aa14.99□□□□□ -0.01
NR4A1-215ENST00000550557 UBTFL1P0CB47 393 aaPredicted RBP14.99□□□□□ -0.01
NR4A1-215ENST00000550557 L1TD1Q5T7N2 865 aaKnown RBP14.99□□□□□ -0.01
NR4A1-215ENST00000550557 DDX19BQ9UMR2 479 aa14.99□□□□□ -0.01
NR4A1-215ENST00000550557 BICDL1Q6ZP65 573 aa14.99□□□□□ -0.01
NR4A1-215ENST00000550557 BCL11BQ9C0K0 894 aaPredicted RBP14.99□□□□□ -0.01
NR4A1-215ENST00000550557 COG6Q9Y2V7 657 aa14.99□□□□□ -0.01
NR4A1-215ENST00000550557 NOS1P29475 1434 aa14.99□□□□□ -0.01
NR4A1-215ENST00000550557 ZMYM3Q14202 1370 aa14.98□□□□□ -0.01
NR4A1-215ENST00000550557 DUOX2Q9NRD8 1548 aa14.98□□□□□ -0.01
NR4A1-215ENST00000550557 PTCD1O75127 700 aaKnown RBP14.98□□□□□ -0.01
NR4A1-215ENST00000550557 DZIP1LQ8IYY4 767 aaKnown RBP14.98□□□□□ -0.01
NR4A1-215ENST00000550557 DIAPH3Q9NSV4 1193 aa14.98□□□□□ -0.01
NR4A1-215ENST00000550557 UHRF1BP1Q6BDS2 1440 aa14.98□□□□□ -0.01
NR4A1-215ENST00000550557 ARHGEF12Q9NZN5 1544 aa14.97□□□□□ -0.01
NR4A1-215ENST00000550557 MPRIPQ6WCQ1 1025 aa14.97□□□□□ -0.01
NR4A1-215ENST00000550557 CHRNA2Q15822 529 aa14.97□□□□□ -0.01
NR4A1-215ENST00000550557 CCDC27Q2M243 656 aa14.97□□□□□ -0.01
NR4A1-215ENST00000550557 NME9Q86XW9 330 aa14.97□□□□□ -0.01
NR4A1-215ENST00000550557 PLCB2Q00722 1185 aa14.96□□□□□ -0.01
NR4A1-215ENST00000550557 FAM161AQ3B820 660 aa14.96□□□□□ -0.01
NR4A1-215ENST00000550557 RASSF8Q8NHQ8 419 aa14.96□□□□□ -0.01
NR4A1-215ENST00000550557 DNAJC5Q9H3Z4 198 aa14.96□□□□□ -0.01
NR4A1-215ENST00000550557 BTBD11A6QL63 1104 aa14.96□□□□□ -0.01
NR4A1-215ENST00000550557 ZPR1O75312 459 aa14.96□□□□□ -0.01
NR4A1-215ENST00000550557 MYL6BP14649 208 aa14.96□□□□□ -0.01
NR4A1-215ENST00000550557 SYNE3Q6ZMZ3 975 aa14.96□□□□□ -0.01
NR4A1-215ENST00000550557 TRAPPC8Q9Y2L5 1435 aa14.96□□□□□ -0.01
NR4A1-215ENST00000550557 DHX16O60231 1041 aaKnown RBP14.96□□□□□ -0.02
NR4A1-215ENST00000550557 AKAP17AQ02040 695 aaKnown RBP14.95□□□□□ -0.02
NR4A1-215ENST00000550557 SAMD1Q6SPF0 538 aaPredicted RBP14.95□□□□□ -0.02
NR4A1-215ENST00000550557 C14orf93Q9H972 538 aaKnown RBP14.95□□□□□ -0.02
NR4A1-215ENST00000550557 MFAP1P55081 439 aaKnown RBP14.95□□□□□ -0.02
NR4A1-215ENST00000550557 LRRC59Q96AG4 307 aaKnown RBP14.94□□□□□ -0.02
NR4A1-215ENST00000550557 CNNM1Q9NRU3 951 aa14.94□□□□□ -0.02
NR4A1-215ENST00000550557 PRAG1Q86YV5 1406 aa14.94□□□□□ -0.02
NR4A1-215ENST00000550557 RUFY2Q8WXA3 655 aa14.94□□□□□ -0.02
NR4A1-215ENST00000550557 AMOTQ4VCS5 1084 aa14.93□□□□□ -0.02
NR4A1-215ENST00000550557 TWISTNBQ3B726 338 aaPredicted RBP14.93□□□□□ -0.02
NR4A1-215ENST00000550557 USHBP1Q8N6Y0 703 aa14.93□□□□□ -0.02
NR4A1-215ENST00000550557 RIMS2Q9UQ26 1411 aa14.93□□□□□ -0.02
NR4A1-215ENST00000550557 ZNF652Q9Y2D9 606 aa14.93□□□□□ -0.02
NR4A1-215ENST00000550557 KIF3AQ9Y496 699 aa14.93□□□□□ -0.02
NR4A1-215ENST00000550557 HTATSF1O43719 755 aaKnown RBP14.92□□□□□ -0.02
NR4A1-215ENST00000550557 SPRYD3Q8NCJ5 442 aa14.92□□□□□ -0.02
NR4A1-215ENST00000550557 SLKQ9H2G2 1235 aaPredicted RBP14.92□□□□□ -0.02
NR4A1-215ENST00000550557 GNAI3P08754 354 aa14.92□□□□□ -0.02
NR4A1-215ENST00000550557 MPHOSPH8Q99549 860 aa14.92□□□□□ -0.02
NR4A1-215ENST00000550557 CCDC34Q96HJ3 373 aa14.92□□□□□ -0.02
NR4A1-215ENST00000550557 TCEAL9Q9UHQ7 104 aa14.92□□□□□ -0.02
NR4A1-215ENST00000550557 NSD3Q9BZ95 1437 aa14.92□□□□□ -0.02
NR4A1-215ENST00000550557 ACEP12821 1306 aa14.92□□□□□ -0.02
NR4A1-215ENST00000550557 SCAF11Q99590 1463 aaKnown RBP14.92□□□□□ -0.02
NR4A1-215ENST00000550557 FYB1O15117 783 aa14.91□□□□□ -0.02
NR4A1-215ENST00000550557 TRDNQ13061 729 aa14.91□□□□□ -0.02
NR4A1-215ENST00000550557 NAP1L5Q96NT1 182 aaPredicted RBP14.91□□□□□ -0.02
NR4A1-215ENST00000550557 GNAT3A8MTJ3 354 aa14.91□□□□□ -0.02
NR4A1-215ENST00000550557 NOL8Q76FK4 1167 aaKnown RBP14.91□□□□□ -0.02
NR4A1-215ENST00000550557 ADGBQ8N7X0 1667 aa14.91□□□□□ -0.02
NR4A1-215ENST00000550557 SLC4A3P48751 1232 aa14.91□□□□□ -0.02
NR4A1-215ENST00000550557 DNTTIP2Q5QJE6 756 aaKnown RBP14.91□□□□□ -0.02
NR4A1-215ENST00000550557 GSE1Q14687 1217 aa14.91□□□□□ -0.02
NR4A1-215ENST00000550557 CPLX2Q6PUV4 134 aaKnown RBP14.91□□□□□ -0.02
NR4A1-215ENST00000550557 DISP3Q9P2K9 1392 aa14.91□□□□□ -0.02
NR4A1-215ENST00000550557 GNL3LQ9NVN8 582 aaKnown RBP14.9□□□□□ -0.02
NR4A1-215ENST00000550557 WASHC4Q2M389 1173 aa14.9□□□□□ -0.02
NR4A1-215ENST00000550557 SLC4A2P04920 1241 aa14.9□□□□□ -0.02
NR4A1-215ENST00000550557 FCHSD2O94868 740 aa14.9□□□□□ -0.02
NR4A1-215ENST00000550557 CCAR1Q8IX12 1150 aaKnown RBP14.9□□□□□ -0.02
NR4A1-215ENST00000550557 ERC2O15083 957 aa14.89□□□□□ -0.03
NR4A1-215ENST00000550557 AK7Q96M32 723 aa14.89□□□□□ -0.03
NR4A1-215ENST00000550557 TBC1D2BQ9UPU7 963 aa14.89□□□□□ -0.03
NR4A1-215ENST00000550557 CHMP4CQ96CF2 233 aa14.89□□□□□ -0.03
NR4A1-215ENST00000550557 KDM6BO15054 1643 aa14.88□□□□□ -0.03
NR4A1-215ENST00000550557 KCNA6P17658 529 aa14.88□□□□□ -0.03
NR4A1-215ENST00000550557 WWC1Q8IX03 1113 aa14.88□□□□□ -0.03
NR4A1-215ENST00000550557 ATP10AO60312 1499 aa14.88□□□□□ -0.03
NR4A1-215ENST00000550557 EXOSC9Q06265 439 aaKnown RBP14.88□□□□□ -0.03
NR4A1-215ENST00000550557 GOLGA6L6A8MZA4 724 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms