RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 SCAF1Q9H7N4 1312 aaKnown RBP14.07□□□□□ -0.16
RAB5C-207ENST00000550504 EDC4Q6P2E9 1401 aaKnown RBP14.07□□□□□ -0.16
RAB5C-207ENST00000550504 PAK3O75914 559 aaPredicted RBP14.06□□□□□ -0.16
RAB5C-207ENST00000550504 NRKQ7Z2Y5 1582 aa14.05□□□□□ -0.16
RAB5C-207ENST00000550504 ANP32CO43423 234 aa14.05□□□□□ -0.16
RAB5C-207ENST00000550504 AMER1Q5JTC6 1135 aaPredicted RBP14.05□□□□□ -0.16
RAB5C-207ENST00000550504 KRT28Q7Z3Y7 464 aa14.05□□□□□ -0.16
RAB5C-207ENST00000550504 CGNL1Q0VF96 1302 aa14.05□□□□□ -0.16
RAB5C-207ENST00000550504 TTC21BQ7Z4L5 1316 aa14.05□□□□□ -0.16
RAB5C-207ENST00000550504 ROBO1Q9Y6N7 1651 aa14.04□□□□□ -0.16
RAB5C-207ENST00000550504 NME9Q86XW9 330 aa14.04□□□□□ -0.16
RAB5C-207ENST00000550504 GGNBP2Q9H3C7 697 aa14.04□□□□□ -0.16
RAB5C-207ENST00000550504 NPHP3Q7Z494 1330 aa14.04□□□□□ -0.16
RAB5C-207ENST00000550504 SSH2Q76I76 1423 aa14.04□□□□□ -0.16
RAB5C-207ENST00000550504 ZRANB1Q9UGI0 708 aa14.03□□□□□ -0.16
RAB5C-207ENST00000550504 KIF20BQ96Q89 1820 aa14.03□□□□□ -0.16
RAB5C-207ENST00000550504 FYB1O15117 783 aa14.02□□□□□ -0.17
RAB5C-207ENST00000550504 PXDNQ92626 1479 aa14.01□□□□□ -0.17
RAB5C-207ENST00000550504 TTC21AQ8NDW8 1320 aa14.01□□□□□ -0.17
RAB5C-207ENST00000550504 NUTM2GQ5VZR2 741 aa14.01□□□□□ -0.17
RAB5C-207ENST00000550504 LMOD2Q6P5Q4 547 aa14.01□□□□□ -0.17
RAB5C-207ENST00000550504 BRD4O60885 1362 aaPredicted RBP14□□□□□ -0.17
RAB5C-207ENST00000550504 NPC1L1Q9UHC9 1359 aa14□□□□□ -0.17
RAB5C-207ENST00000550504 PLEKHG5O94827 1062 aa14□□□□□ -0.17
RAB5C-207ENST00000550504 MORC1Q86VD1 984 aa14□□□□□ -0.17
RAB5C-207ENST00000550504 MIER1Q8N108 512 aa14□□□□□ -0.17
RAB5C-207ENST00000550504 ABTB2Q8N961 1025 aa14□□□□□ -0.17
RAB5C-207ENST00000550504 PRKRIP1Q9H875 184 aaPredicted RBP14□□□□□ -0.17
RAB5C-207ENST00000550504 TRPM3Q9HCF6 1732 aaPredicted RBP14□□□□□ -0.17
RAB5C-207ENST00000550504 NHSL1Q5SYE7 1610 aa14□□□□□ -0.17
RAB5C-207ENST00000550504 NSD2O96028 1365 aa13.99□□□□□ -0.17
RAB5C-207ENST00000550504 PIK3C2AO00443 1686 aa13.99□□□□□ -0.17
RAB5C-207ENST00000550504 TNNT2P45379 298 aaPredicted RBP13.99□□□□□ -0.17
RAB5C-207ENST00000550504 SOS2Q07890 1332 aaPredicted RBP13.98□□□□□ -0.17
RAB5C-207ENST00000550504 NLRP6P59044 892 aa13.98□□□□□ -0.17
RAB5C-207ENST00000550504 COG3Q96JB2 828 aa13.98□□□□□ -0.17
RAB5C-207ENST00000550504 ANKRD26Q9UPS8 1709 aa13.98□□□□□ -0.17
RAB5C-207ENST00000550504 SBNO1A3KN83 1393 aa13.97□□□□□ -0.17
RAB5C-207ENST00000550504 PARD3Q8TEW0 1356 aa13.97□□□□□ -0.17
RAB5C-207ENST00000550504 RALBP1Q15311 655 aa13.97□□□□□ -0.17
RAB5C-207ENST00000550504 TNS3Q68CZ2 1445 aa13.97□□□□□ -0.17
RAB5C-207ENST00000550504 AHDC1Q5TGY3 1603 aaPredicted RBP13.97□□□□□ -0.17
RAB5C-207ENST00000550504 SPATA31A3Q5VYP0 1347 aa13.96□□□□□ -0.17
RAB5C-207ENST00000550504 OVOS2A0A0J9YW53 1432 aa13.96□□□□□ -0.18
RAB5C-207ENST00000550504 OVOS2Q6IE36 1432 aa13.96□□□□□ -0.18
RAB5C-207ENST00000550504 USP31Q70CQ4 1352 aa13.96□□□□□ -0.18
RAB5C-207ENST00000550504 PHLPP1O60346 1717 aa13.95□□□□□ -0.18
RAB5C-207ENST00000550504 ALS2Q96Q42 1657 aa13.95□□□□□ -0.18
RAB5C-207ENST00000550504 SOX12O15370 315 aa13.95□□□□□ -0.18
RAB5C-207ENST00000550504 RGS17Q9UGC6 210 aaPredicted RBP13.95□□□□□ -0.18
RAB5C-207ENST00000550504 FBLN1P23142 703 aa13.94□□□□□ -0.18
RAB5C-207ENST00000550504 NLRP13Q86W25 1043 aa13.94□□□□□ -0.18
RAB5C-207ENST00000550504 MYBBP1AQ9BQG0 1328 aaKnown RBP13.93□□□□□ -0.18
RAB5C-207ENST00000550504 MARF1Q9Y4F3 1742 aaKnown RBP13.93□□□□□ -0.18
RAB5C-207ENST00000550504 PPP2R1AP30153 589 aa13.93□□□□□ -0.18
RAB5C-207ENST00000550504 ARHGEF10O15013 1369 aa13.93□□□□□ -0.18
RAB5C-207ENST00000550504 LRRC59Q96AG4 307 aaKnown RBP13.92□□□□□ -0.18
RAB5C-207ENST00000550504 COL16A1Q07092 1604 aaPredicted RBP13.92□□□□□ -0.18
RAB5C-207ENST00000550504 USP54Q70EL1 1684 aa13.91□□□□□ -0.18
RAB5C-207ENST00000550504 CABLES1Q8TDN4 633 aa13.91□□□□□ -0.18
RAB5C-207ENST00000550504 RRS1Q15050 365 aaKnown RBP13.9□□□□□ -0.18
RAB5C-207ENST00000550504 USP19O94966 1318 aa13.9□□□□□ -0.19
RAB5C-207ENST00000550504 ZBTB7CA1YPR0 619 aa13.89□□□□□ -0.19
RAB5C-207ENST00000550504 PPM1GO15355 546 aaPredicted RBP13.89□□□□□ -0.19
RAB5C-207ENST00000550504 SLIT3O75094 1523 aa13.89□□□□□ -0.19
RAB5C-207ENST00000550504 PNPLA6Q8IY17 1366 aa13.88□□□□□ -0.19
RAB5C-207ENST00000550504 GCP02774 474 aa13.88□□□□□ -0.19
RAB5C-207ENST00000550504 MTHFSP49914 203 aa13.88□□□□□ -0.19
RAB5C-207ENST00000550504 HAP1P54257 671 aaPredicted RBP13.88□□□□□ -0.19
RAB5C-207ENST00000550504 CCDC184Q52MB2 194 aa13.88□□□□□ -0.19
RAB5C-207ENST00000550504 KCNH5Q8NCM2 988 aa13.88□□□□□ -0.19
RAB5C-207ENST00000550504 EMILIN1Q9Y6C2 1016 aa13.88□□□□□ -0.19
RAB5C-207ENST00000550504 PHRF1Q9P1Y6 1649 aaKnown RBP13.88□□□□□ -0.19
RAB5C-207ENST00000550504 AATKQ6ZMQ8 1374 aa13.87□□□□□ -0.19
RAB5C-207ENST00000550504 PHF23Q9BUL5 403 aaPredicted RBP13.87□□□□□ -0.19
RAB5C-207ENST00000550504 MRS2Q9HD23 443 aa13.87□□□□□ -0.19
RAB5C-207ENST00000550504 POLKQ9UBT6 870 aa13.87□□□□□ -0.19
RAB5C-207ENST00000550504 MAP2P11137 1827 aaKnown RBP13.87□□□□□ -0.19
RAB5C-207ENST00000550504 CRYBG1Q9Y4K1 1723 aa13.87□□□□□ -0.19
RAB5C-207ENST00000550504 NFAT5O94916 1531 aa13.86□□□□□ -0.19
RAB5C-207ENST00000550504 CCER2I3L3R5 266 aa13.86□□□□□ -0.19
RAB5C-207ENST00000550504 ZC3H6P61129 1189 aaKnown RBP13.86□□□□□ -0.19
RAB5C-207ENST00000550504 MAP3K19Q56UN5 1328 aa13.86□□□□□ -0.19
RAB5C-207ENST00000550504 ABCA3Q99758 1704 aa13.84□□□□□ -0.19
RAB5C-207ENST00000550504 COL22A1Q8NFW1 1626 aaPredicted RBP13.84□□□□□ -0.19
RAB5C-207ENST00000550504 AMPHP49418 695 aa13.84□□□□□ -0.19
RAB5C-207ENST00000550504 LTN1O94822 1766 aa13.83□□□□□ -0.19
RAB5C-207ENST00000550504 CFAP53Q96M91 514 aa13.83□□□□□ -0.2
RAB5C-207ENST00000550504 PEAK1Q9H792 1746 aa13.83□□□□□ -0.2
RAB5C-207ENST00000550504 JCADQ9P266 1359 aa13.83□□□□□ -0.2
RAB5C-207ENST00000550504 SMG6Q86US8 1419 aaKnown RBP13.82□□□□□ -0.2
RAB5C-207ENST00000550504 NUTM2BA6NNL0 878 aaPredicted RBP13.82□□□□□ -0.2
RAB5C-207ENST00000550504 NUTM2EB1AL46 878 aaPredicted RBP13.82□□□□□ -0.2
RAB5C-207ENST00000550504 ARHGEF25Q86VW2 580 aa13.82□□□□□ -0.2
RAB5C-207ENST00000550504 NUTM2AQ8IVF1 878 aaPredicted RBP13.82□□□□□ -0.2
RAB5C-207ENST00000550504 SHPRHQ149N8 1683 aa13.82□□□□□ -0.2
RAB5C-207ENST00000550504 CDK12Q9NYV4 1490 aaPredicted RBP13.81□□□□□ -0.2
RAB5C-207ENST00000550504 CHRNA2Q15822 529 aa13.81□□□□□ -0.2
RAB5C-207ENST00000550504 KIAA0232Q92628 1395 aa13.81□□□□□ -0.2
RAB5C-207ENST00000550504 HOXC9P31274 260 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms