RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 CARD14Q9BXL6 1004 aa18.1■□□□□ 0.49
RAB5C-206ENST00000550406 HDGFL2Q7Z4V5 671 aaPredicted RBP18.09■□□□□ 0.49
RAB5C-206ENST00000550406 LRRC59Q96AG4 307 aaKnown RBP18.09■□□□□ 0.49
RAB5C-206ENST00000550406 TERF2IPQ9NYB0 399 aa18.09■□□□□ 0.49
RAB5C-206ENST00000550406 SHPRHQ149N8 1683 aa18.09■□□□□ 0.49
RAB5C-206ENST00000550406 TTC21BQ7Z4L5 1316 aa18.08■□□□□ 0.49
RAB5C-206ENST00000550406 MARF1Q9Y4F3 1742 aaKnown RBP18.08■□□□□ 0.48
RAB5C-206ENST00000550406 PIK3C2AO00443 1686 aa18.08■□□□□ 0.48
RAB5C-206ENST00000550406 TNS3Q68CZ2 1445 aa18.07■□□□□ 0.48
RAB5C-206ENST00000550406 PANK3Q9H999 370 aa18.07■□□□□ 0.48
RAB5C-206ENST00000550406 COL22A1Q8NFW1 1626 aaPredicted RBP18.07■□□□□ 0.48
RAB5C-206ENST00000550406 CRYBG1Q9Y4K1 1723 aa18.06■□□□□ 0.48
RAB5C-206ENST00000550406 BRD4O60885 1362 aaPredicted RBP18.06■□□□□ 0.48
RAB5C-206ENST00000550406 PNPLA6Q8IY17 1366 aa18.06■□□□□ 0.48
RAB5C-206ENST00000550406 EDC4Q6P2E9 1401 aaKnown RBP18.06■□□□□ 0.48
RAB5C-206ENST00000550406 SOCS7O14512 581 aa18.05■□□□□ 0.48
RAB5C-206ENST00000550406 PAK3O75914 559 aaPredicted RBP18.05■□□□□ 0.48
RAB5C-206ENST00000550406 ZNF316A6NFI3 1004 aaPredicted RBP18.04■□□□□ 0.48
RAB5C-206ENST00000550406 JCADQ9P266 1359 aa18.04■□□□□ 0.48
RAB5C-206ENST00000550406 ABCA3Q99758 1704 aa18.03■□□□□ 0.48
RAB5C-206ENST00000550406 KIF20BQ96Q89 1820 aa18.03■□□□□ 0.48
RAB5C-206ENST00000550406 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.03■□□□□ 0.48
RAB5C-206ENST00000550406 ZRANB1Q9UGI0 708 aa18.03■□□□□ 0.48
RAB5C-206ENST00000550406 USP54Q70EL1 1684 aa18.03■□□□□ 0.48
RAB5C-206ENST00000550406 TTC21AQ8NDW8 1320 aa18.02■□□□□ 0.48
RAB5C-206ENST00000550406 PER1O15534 1290 aaPredicted RBP18.02■□□□□ 0.48
RAB5C-206ENST00000550406 MED1Q15648 1581 aaPredicted RBP18.02■□□□□ 0.48
RAB5C-206ENST00000550406 NUTM2GQ5VZR2 741 aa18.02■□□□□ 0.48
RAB5C-206ENST00000550406 LMOD2Q6P5Q4 547 aa18.02■□□□□ 0.48
RAB5C-206ENST00000550406 NSD3Q9BZ95 1437 aa18.02■□□□□ 0.48
RAB5C-206ENST00000550406 NME9Q86XW9 330 aa18.01■□□□□ 0.47
RAB5C-206ENST00000550406 ABTB2Q8N961 1025 aa18.01■□□□□ 0.47
RAB5C-206ENST00000550406 ARHGEF10O15013 1369 aa18.01■□□□□ 0.47
RAB5C-206ENST00000550406 PHRF1Q9P1Y6 1649 aaKnown RBP18■□□□□ 0.47
RAB5C-206ENST00000550406 FYB1O15117 783 aa17.99■□□□□ 0.47
RAB5C-206ENST00000550406 CABLES1Q8TDN4 633 aa17.99■□□□□ 0.47
RAB5C-206ENST00000550406 USP31Q70CQ4 1352 aa17.99■□□□□ 0.47
RAB5C-206ENST00000550406 PLEKHG5O94827 1062 aa17.97■□□□□ 0.47
RAB5C-206ENST00000550406 NLRP6P59044 892 aa17.97■□□□□ 0.47
RAB5C-206ENST00000550406 ANKRD26Q9UPS8 1709 aa17.97■□□□□ 0.47
RAB5C-206ENST00000550406 LRP6O75581 1613 aa17.97■□□□□ 0.47
RAB5C-206ENST00000550406 USP19O94966 1318 aa17.97■□□□□ 0.47
RAB5C-206ENST00000550406 DDX10Q13206 875 aaKnown RBP17.96■□□□□ 0.47
RAB5C-206ENST00000550406 SLIT3O75094 1523 aa17.96■□□□□ 0.47
RAB5C-206ENST00000550406 OVOS2A0A0J9YW53 1432 aa17.96■□□□□ 0.47
RAB5C-206ENST00000550406 OVOS2Q6IE36 1432 aa17.96■□□□□ 0.47
RAB5C-206ENST00000550406 ILDR2Q71H61 639 aa17.95■□□□□ 0.46
RAB5C-206ENST00000550406 NLRP13Q86W25 1043 aa17.95■□□□□ 0.46
RAB5C-206ENST00000550406 GGNBP2Q9H3C7 697 aa17.95■□□□□ 0.46
RAB5C-206ENST00000550406 SPATA31A6Q5VVP1 1343 aa17.95■□□□□ 0.46
RAB5C-206ENST00000550406 NUTM2BA6NNL0 878 aaPredicted RBP17.94■□□□□ 0.46
RAB5C-206ENST00000550406 NUTM2EB1AL46 878 aaPredicted RBP17.94■□□□□ 0.46
RAB5C-206ENST00000550406 AMER1Q5JTC6 1135 aaPredicted RBP17.94■□□□□ 0.46
RAB5C-206ENST00000550406 NUTM2AQ8IVF1 878 aaPredicted RBP17.94■□□□□ 0.46
RAB5C-206ENST00000550406 KNSTRNQ9Y448 316 aa17.92■□□□□ 0.46
RAB5C-206ENST00000550406 CGNL1Q0VF96 1302 aa17.92■□□□□ 0.46
RAB5C-206ENST00000550406 GCP02774 474 aa17.91■□□□□ 0.46
RAB5C-206ENST00000550406 NFAT5O94916 1531 aa17.91■□□□□ 0.46
RAB5C-206ENST00000550406 FBLN1P23142 703 aa17.9■□□□□ 0.46
RAB5C-206ENST00000550406 LTN1O94822 1766 aa17.89■□□□□ 0.45
RAB5C-206ENST00000550406 MAP2P11137 1827 aaKnown RBP17.89■□□□□ 0.45
RAB5C-206ENST00000550406 COG3Q96JB2 828 aa17.89■□□□□ 0.45
RAB5C-206ENST00000550406 COL18A1P39060 1754 aa17.89■□□□□ 0.45
RAB5C-206ENST00000550406 ADAMTS2O95450 1211 aa17.88■□□□□ 0.45
RAB5C-206ENST00000550406 RGPD5Q99666 1765 aa17.88■□□□□ 0.45
RAB5C-206ENST00000550406 ZC3H6P61129 1189 aaKnown RBP17.87■□□□□ 0.45
RAB5C-206ENST00000550406 NSD2O96028 1365 aa17.87■□□□□ 0.45
RAB5C-206ENST00000550406 NPC1L1Q9UHC9 1359 aa17.87■□□□□ 0.45
RAB5C-206ENST00000550406 SOX12O15370 315 aa17.86■□□□□ 0.45
RAB5C-206ENST00000550406 CC2D1BQ5T0F9 858 aaKnown RBP17.86■□□□□ 0.45
RAB5C-206ENST00000550406 FAM83GA6ND36 823 aa17.85■□□□□ 0.45
RAB5C-206ENST00000550406 HAP1P54257 671 aaPredicted RBP17.85■□□□□ 0.45
RAB5C-206ENST00000550406 ARHGEF25Q86VW2 580 aa17.85■□□□□ 0.45
RAB5C-206ENST00000550406 KCNH5Q8NCM2 988 aa17.85■□□□□ 0.45
RAB5C-206ENST00000550406 KIAA0232Q92628 1395 aa17.85■□□□□ 0.45
RAB5C-206ENST00000550406 COL14A1Q05707 1796 aaKnown RBP17.84■□□□□ 0.45
RAB5C-206ENST00000550406 PLCH1Q4KWH8 1693 aa17.84■□□□□ 0.45
RAB5C-206ENST00000550406 CPDO75976 1380 aa17.84■□□□□ 0.45
RAB5C-206ENST00000550406 LMO7Q8WWI1 1683 aa17.83■□□□□ 0.45
RAB5C-206ENST00000550406 CHRNA2Q15822 529 aa17.83■□□□□ 0.44
RAB5C-206ENST00000550406 PEAK1Q9H792 1746 aa17.83■□□□□ 0.44
RAB5C-206ENST00000550406 CNGB1Q14028 1251 aaPredicted RBP17.82■□□□□ 0.44
RAB5C-206ENST00000550406 MORC1Q86VD1 984 aa17.82■□□□□ 0.44
RAB5C-206ENST00000550406 C8orf37Q96NL8 207 aa17.82■□□□□ 0.44
RAB5C-206ENST00000550406 NRAPQ86VF7 1730 aa17.81■□□□□ 0.44
RAB5C-206ENST00000550406 TNNT2P45379 298 aaPredicted RBP17.81■□□□□ 0.44
RAB5C-206ENST00000550406 RRS1Q15050 365 aaKnown RBP17.81■□□□□ 0.44
RAB5C-206ENST00000550406 SLIT2O94813 1529 aa17.81■□□□□ 0.44
RAB5C-206ENST00000550406 NWD2Q9ULI1 1742 aa17.81■□□□□ 0.44
RAB5C-206ENST00000550406 CAMTA1Q9Y6Y1 1673 aa17.8■□□□□ 0.44
RAB5C-206ENST00000550406 MEX3CQ5U5Q3 659 aaKnown RBP17.8■□□□□ 0.44
RAB5C-206ENST00000550406 PRDM11Q9NQV5 511 aa17.8■□□□□ 0.44
RAB5C-206ENST00000550406 AATKQ6ZMQ8 1374 aa17.79■□□□□ 0.44
RAB5C-206ENST00000550406 MAP3K19Q56UN5 1328 aa17.79■□□□□ 0.44
RAB5C-206ENST00000550406 FNBP4Q8N3X1 1017 aaPredicted RBP17.79■□□□□ 0.44
RAB5C-206ENST00000550406 NGLY1Q96IV0 654 aa17.79■□□□□ 0.44
RAB5C-206ENST00000550406 AXIN2Q9Y2T1 843 aa17.79■□□□□ 0.44
RAB5C-206ENST00000550406 BCL9LQ86UU0 1499 aa17.78■□□□□ 0.44
RAB5C-206ENST00000550406 ZBTB7CA1YPR0 619 aa17.78■□□□□ 0.44
RAB5C-206ENST00000550406 POLKQ9UBT6 870 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms