RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 RBM6P78332 1123 aaKnown RBP16.86■□□□□ 0.29
LETMD1-221ENST00000550100 NUTM2GQ5VZR2 741 aa16.86■□□□□ 0.29
LETMD1-221ENST00000550100 SLIT2O94813 1529 aa16.85■□□□□ 0.29
LETMD1-221ENST00000550100 PPIP5K1Q6PFW1 1433 aa16.85■□□□□ 0.29
LETMD1-221ENST00000550100 RGS12O14924 1447 aa16.85■□□□□ 0.29
LETMD1-221ENST00000550100 TRPC5Q9UL62 973 aaPredicted RBP16.84■□□□□ 0.29
LETMD1-221ENST00000550100 CRYBG1Q9Y4K1 1723 aa16.83■□□□□ 0.28
LETMD1-221ENST00000550100 EVC2Q86UK5 1308 aa16.83■□□□□ 0.28
LETMD1-221ENST00000550100 UNC5CLQ8IV45 518 aa16.82■□□□□ 0.28
LETMD1-221ENST00000550100 CDK12Q9NYV4 1490 aaPredicted RBP16.82■□□□□ 0.28
LETMD1-221ENST00000550100 HAP1P54257 671 aaPredicted RBP16.81■□□□□ 0.28
LETMD1-221ENST00000550100 GJD4Q96KN9 370 aaPredicted RBP16.8■□□□□ 0.28
LETMD1-221ENST00000550100 TESK2Q96S53 571 aa16.79■□□□□ 0.28
LETMD1-221ENST00000550100 SSH2Q76I76 1423 aa16.78■□□□□ 0.28
LETMD1-221ENST00000550100 PLCH1Q4KWH8 1693 aa16.78■□□□□ 0.28
LETMD1-221ENST00000550100 ABTB2Q8N961 1025 aa16.78■□□□□ 0.28
LETMD1-221ENST00000550100 UPF1Q92900 1129 aaKnown RBP eCLIP16.78■□□□□ 0.283e-9■■■□□ 18.6
LETMD1-221ENST00000550100 GLI3P10071 1580 aa16.77■□□□□ 0.28
LETMD1-221ENST00000550100 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.77■□□□□ 0.28
LETMD1-221ENST00000550100 ST20-MTHFSA0A0A6YYL1 179 aa16.77■□□□□ 0.28
LETMD1-221ENST00000550100 SBNO2Q9Y2G9 1366 aa16.77■□□□□ 0.27
LETMD1-221ENST00000550100 ZC3H6P61129 1189 aaKnown RBP16.76■□□□□ 0.27
LETMD1-221ENST00000550100 CHRNA2Q15822 529 aa16.76■□□□□ 0.27
LETMD1-221ENST00000550100 BTG4Q9NY30 223 aa16.76■□□□□ 0.27
LETMD1-221ENST00000550100 USP6P35125 1406 aa16.76■□□□□ 0.27
LETMD1-221ENST00000550100 VPS72Q15906 364 aa16.75■□□□□ 0.27
LETMD1-221ENST00000550100 KIAA0232Q92628 1395 aa16.75■□□□□ 0.27
LETMD1-221ENST00000550100 EP400Q96L91 3159 aa16.75■□□□□ 0.27
LETMD1-221ENST00000550100 PHRF1Q9P1Y6 1649 aaKnown RBP16.75■□□□□ 0.27
LETMD1-221ENST00000550100 USP19O94966 1318 aa16.74■□□□□ 0.27
LETMD1-221ENST00000550100 NRAPQ86VF7 1730 aa16.74■□□□□ 0.27
LETMD1-221ENST00000550100 CPSF1Q10570 1443 aaKnown RBP16.74■□□□□ 0.27
LETMD1-221ENST00000550100 NWD2Q9ULI1 1742 aa16.73■□□□□ 0.27
LETMD1-221ENST00000550100 CD163L1Q9NR16 1453 aa16.73■□□□□ 0.27
LETMD1-221ENST00000550100 SLC12A5Q9H2X9 1139 aa16.73■□□□□ 0.27
LETMD1-221ENST00000550100 PRDM11Q9NQV5 511 aa16.73■□□□□ 0.27
LETMD1-221ENST00000550100 COL14A1Q05707 1796 aaKnown RBP16.72■□□□□ 0.27
LETMD1-221ENST00000550100 CLSPNQ9HAW4 1339 aa16.72■□□□□ 0.27
LETMD1-221ENST00000550100 ZRANB1Q9UGI0 708 aa16.72■□□□□ 0.27
LETMD1-221ENST00000550100 AKAP12Q02952 1782 aa16.71■□□□□ 0.27
LETMD1-221ENST00000550100 ATAD2Q6PL18 1390 aa16.71■□□□□ 0.27
LETMD1-221ENST00000550100 TTC21BQ7Z4L5 1316 aa16.71■□□□□ 0.27
LETMD1-221ENST00000550100 GCP02774 474 aa16.71■□□□□ 0.27
LETMD1-221ENST00000550100 NRKQ7Z2Y5 1582 aa16.7■□□□□ 0.26
LETMD1-221ENST00000550100 ONECUT3O60422 494 aaPredicted RBP16.7■□□□□ 0.26
LETMD1-221ENST00000550100 NLRP6P59044 892 aa16.7■□□□□ 0.26
LETMD1-221ENST00000550100 NLRP13Q86W25 1043 aa16.7■□□□□ 0.26
LETMD1-221ENST00000550100 CCER1Q8TC90 406 aaPredicted RBP16.7■□□□□ 0.26
LETMD1-221ENST00000550100 PIK3C2AO00443 1686 aa16.7■□□□□ 0.26
LETMD1-221ENST00000550100 ZNF692Q9BU19 519 aaPredicted RBP16.69■□□□□ 0.26
LETMD1-221ENST00000550100 CCDC9Q9Y3X0 531 aaKnown RBP16.69■□□□□ 0.26
LETMD1-221ENST00000550100 BRD4O60885 1362 aaPredicted RBP16.69■□□□□ 0.26
LETMD1-221ENST00000550100 BRWD3Q6RI45 1802 aa16.69■□□□□ 0.26
LETMD1-221ENST00000550100 SEPT12Q8IYM1 358 aa16.68■□□□□ 0.26
LETMD1-221ENST00000550100 TMC1Q8TDI8 760 aa16.68■□□□□ 0.26
LETMD1-221ENST00000550100 TIMELESSQ9UNS1 1208 aa16.68■□□□□ 0.26
LETMD1-221ENST00000550100 USP47Q96K76 1375 aa16.68■□□□□ 0.26
LETMD1-221ENST00000550100 CAMTA1Q9Y6Y1 1673 aa16.68■□□□□ 0.26
LETMD1-221ENST00000550100 KTN1Q86UP2 1357 aaKnown RBP16.67■□□□□ 0.26
LETMD1-221ENST00000550100 SPATA31A5Q5VU36 1347 aa16.67■□□□□ 0.26
LETMD1-221ENST00000550100 SPATA31A7Q8IWB4 1347 aa16.67■□□□□ 0.26
LETMD1-221ENST00000550100 FAM98CQ17RN3 349 aaKnown RBP16.67■□□□□ 0.26
LETMD1-221ENST00000550100 CPDO75976 1380 aa16.66■□□□□ 0.26
LETMD1-221ENST00000550100 SLIT3O75094 1523 aa16.66■□□□□ 0.26
LETMD1-221ENST00000550100 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.66■□□□□ 0.26
LETMD1-221ENST00000550100 STRN4Q9NRL3 753 aa16.66■□□□□ 0.26
LETMD1-221ENST00000550100 NME9Q86XW9 330 aa16.65■□□□□ 0.26
LETMD1-221ENST00000550100 PUS7Q96PZ0 661 aaKnown RBP16.65■□□□□ 0.26
LETMD1-221ENST00000550100 LMO7Q8WWI1 1683 aa16.65■□□□□ 0.26
LETMD1-221ENST00000550100 MON2Q7Z3U7 1717 aa16.64■□□□□ 0.25
LETMD1-221ENST00000550100 LARP1Q6PKG0 1096 aaKnown RBP16.64■□□□□ 0.25
LETMD1-221ENST00000550100 AXIN2Q9Y2T1 843 aa16.64■□□□□ 0.25
LETMD1-221ENST00000550100 A0A1W2PP64 1363 aa16.63■□□□□ 0.25
LETMD1-221ENST00000550100 SOX12O15370 315 aa16.63■□□□□ 0.25
LETMD1-221ENST00000550100 SPATA31A1Q5TZJ5 1347 aa16.63■□□□□ 0.25
LETMD1-221ENST00000550100 TTC21AQ8NDW8 1320 aa16.63■□□□□ 0.25
LETMD1-221ENST00000550100 ZBTB7CA1YPR0 619 aa16.62■□□□□ 0.25
LETMD1-221ENST00000550100 COL18A1P39060 1754 aa16.62■□□□□ 0.25
LETMD1-221ENST00000550100 ARHGEF25Q86VW2 580 aa16.61■□□□□ 0.25
LETMD1-221ENST00000550100 FAM182BQ5T319 152 aa16.61■□□□□ 0.25
LETMD1-221ENST00000550100 EVA1CP58658 441 aa16.6■□□□□ 0.25
LETMD1-221ENST00000550100 USP35Q9P2H5 1018 aa16.6■□□□□ 0.25
LETMD1-221ENST00000550100 USP31Q70CQ4 1352 aa16.59■□□□□ 0.25
LETMD1-221ENST00000550100 KRT27Q7Z3Y8 459 aa16.59■□□□□ 0.25
LETMD1-221ENST00000550100 HDGFL2Q7Z4V5 671 aaPredicted RBP16.59■□□□□ 0.25
LETMD1-221ENST00000550100 NFAT5O94916 1531 aa16.59■□□□□ 0.25
LETMD1-221ENST00000550100 AATKQ6ZMQ8 1374 aa16.58■□□□□ 0.25
LETMD1-221ENST00000550100 COL5A2P05997 1499 aaPredicted RBP16.58■□□□□ 0.24
LETMD1-221ENST00000550100 TMF1P82094 1093 aa16.58■□□□□ 0.24
LETMD1-221ENST00000550100 TERF2IPQ9NYB0 399 aa16.58■□□□□ 0.24
LETMD1-221ENST00000550100 THSD7AQ9UPZ6 1657 aa16.57■□□□□ 0.24
LETMD1-221ENST00000550100 EDC4Q6P2E9 1401 aaKnown RBP16.57■□□□□ 0.24
LETMD1-221ENST00000550100 RGPD5Q99666 1765 aa16.57■□□□□ 0.24
LETMD1-221ENST00000550100 FBLN1P23142 703 aa16.57■□□□□ 0.24
LETMD1-221ENST00000550100 A0A0G2JS52 829 aa16.56■□□□□ 0.24
LETMD1-221ENST00000550100 MYT1Q01538 1121 aa16.56■□□□□ 0.24
LETMD1-221ENST00000550100 KCNH5Q8NCM2 988 aa16.54■□□□□ 0.24
LETMD1-221ENST00000550100 CARD14Q9BXL6 1004 aa16.54■□□□□ 0.24
LETMD1-221ENST00000550100 USP54Q70EL1 1684 aa16.54■□□□□ 0.24
LETMD1-221ENST00000550100 HSPA5P11021 654 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms