RNA–Protein interactions for RNA: ENST00000549833.1

UBE2N-204, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3 BASIC

Gene UBE2N, Length 960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-204ENST00000549833 SNAPC4Q5SXM2 1469 aa10.74□□□□□ -0.69
UBE2N-204ENST00000549833 LILRB3O75022 631 aa10.74□□□□□ -0.69
UBE2N-204ENST00000549833 QPCTQ16769 361 aa10.74□□□□□ -0.69
UBE2N-204ENST00000549833 FAM160A2Q8N612 972 aaPredicted RBP10.74□□□□□ -0.69
UBE2N-204ENST00000549833 RUSC2Q8N2Y8 1516 aa10.74□□□□□ -0.69
UBE2N-204ENST00000549833 PROCA1Q8NCQ7 364 aaPredicted RBP10.73□□□□□ -0.69
UBE2N-204ENST00000549833 PRR7Q8TB68 274 aa10.73□□□□□ -0.69
UBE2N-204ENST00000549833 PRDM9Q9NQV7 894 aa10.73□□□□□ -0.69
UBE2N-204ENST00000549833 TMEM132AQ24JP5 1023 aa10.72□□□□□ -0.69
UBE2N-204ENST00000549833 PPP1R18Q6NYC8 613 aa10.72□□□□□ -0.69
UBE2N-204ENST00000549833 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.72□□□□□ -0.69
UBE2N-204ENST00000549833 KIF27Q86VH2 1401 aa10.72□□□□□ -0.69
UBE2N-204ENST00000549833 ERICH3Q5RHP9 1530 aa10.72□□□□□ -0.69
UBE2N-204ENST00000549833 ADAMTS12P58397 1594 aa10.72□□□□□ -0.69
UBE2N-204ENST00000549833 JUNDP17535 347 aa10.71□□□□□ -0.69
UBE2N-204ENST00000549833 CUL7Q14999 1698 aa10.7□□□□□ -0.7
UBE2N-204ENST00000549833 MAGI1Q96QZ7 1491 aaPredicted RBP10.7□□□□□ -0.7
UBE2N-204ENST00000549833 MMP16P51512 607 aa10.7□□□□□ -0.7
UBE2N-204ENST00000549833 PPP2R2DQ66LE6 453 aa10.7□□□□□ -0.7
UBE2N-204ENST00000549833 HELBQ8NG08 1087 aaPredicted RBP10.7□□□□□ -0.7
UBE2N-204ENST00000549833 DXOO77932 396 aaKnown RBP10.69□□□□□ -0.7
UBE2N-204ENST00000549833 DESI1Q6ICB0 168 aa10.69□□□□□ -0.7
UBE2N-204ENST00000549833 TSC1Q92574 1164 aa10.69□□□□□ -0.7
UBE2N-204ENST00000549833 CFAP99D6REC4 459 aa10.68□□□□□ -0.7
UBE2N-204ENST00000549833 RNF223E7ERA6 249 aa10.68□□□□□ -0.7
UBE2N-204ENST00000549833 ANKLE1Q8NAG6 615 aa10.68□□□□□ -0.7
UBE2N-204ENST00000549833 RTL5Q5HYW3 569 aaPredicted RBP10.67□□□□□ -0.7
UBE2N-204ENST00000549833 FCF1Q9Y324 198 aaKnown RBP10.66□□□□□ -0.7
UBE2N-204ENST00000549833 SYNJ2O15056 1496 aa10.66□□□□□ -0.7
UBE2N-204ENST00000549833 IGF1RP08069 1367 aa10.65□□□□□ -0.7
UBE2N-204ENST00000549833 RFC5P40937 340 aa10.65□□□□□ -0.7
UBE2N-204ENST00000549833 PTPRNQ16849 979 aa10.65□□□□□ -0.7
UBE2N-204ENST00000549833 PPEF1O14829 653 aaPredicted RBP10.64□□□□□ -0.71
UBE2N-204ENST00000549833 NUDT12Q9BQG2 462 aa10.64□□□□□ -0.71
UBE2N-204ENST00000549833 FHAD1B1AJZ9 1412 aa10.64□□□□□ -0.71
UBE2N-204ENST00000549833 GTF3C3Q9Y5Q9 886 aa10.63□□□□□ -0.71
UBE2N-204ENST00000549833 GRIN2AQ12879 1464 aa10.62□□□□□ -0.71
UBE2N-204ENST00000549833 CCNYL3P0C7X3 344 aa10.62□□□□□ -0.71
UBE2N-204ENST00000549833 FBXO31Q5XUX0 539 aaPredicted RBP10.62□□□□□ -0.71
UBE2N-204ENST00000549833 FAM9AQ8IZU1 332 aaPredicted RBP10.62□□□□□ -0.71
UBE2N-204ENST00000549833 CHMP7Q8WUX9 453 aaPredicted RBP10.62□□□□□ -0.71
UBE2N-204ENST00000549833 CEP170Q5SW79 1584 aa10.61□□□□□ -0.71
UBE2N-204ENST00000549833 AP1G2O75843 785 aa10.61□□□□□ -0.71
UBE2N-204ENST00000549833 CCDC24Q8N4L8 307 aa10.61□□□□□ -0.71
UBE2N-204ENST00000549833 TIMELESSQ9UNS1 1208 aa10.61□□□□□ -0.71
UBE2N-204ENST00000549833 CARMIL1Q5VZK9 1371 aa10.61□□□□□ -0.71
UBE2N-204ENST00000549833 RGS20O76081 388 aa10.6□□□□□ -0.71
UBE2N-204ENST00000549833 TMEM259Q4ZIN3 620 aa10.6□□□□□ -0.71
UBE2N-204ENST00000549833 LYPD8Q6UX82 237 aa10.6□□□□□ -0.71
UBE2N-204ENST00000549833 CTTNBP2Q8WZ74 1663 aa10.6□□□□□ -0.71
UBE2N-204ENST00000549833 EEA1Q15075 1411 aa10.59□□□□□ -0.71
UBE2N-204ENST00000549833 ZBTB24O43167 697 aaPredicted RBP10.58□□□□□ -0.72
UBE2N-204ENST00000549833 CLASP1Q7Z460 1538 aa10.58□□□□□ -0.72
UBE2N-204ENST00000549833 RAPGEF2Q9Y4G8 1499 aa10.57□□□□□ -0.72
UBE2N-204ENST00000549833 USP17L8P0C7I0 530 aa10.57□□□□□ -0.72
UBE2N-204ENST00000549833 KIF21BO75037 1637 aa10.56□□□□□ -0.72
UBE2N-204ENST00000549833 PER1O15534 1290 aaPredicted RBP10.56□□□□□ -0.72
UBE2N-204ENST00000549833 CTHP32929 405 aa10.56□□□□□ -0.72
UBE2N-204ENST00000549833 CTDSPL2Q05D32 466 aa10.56□□□□□ -0.72
UBE2N-204ENST00000549833 PLA2G2CQ5R387 149 aa10.56□□□□□ -0.72
UBE2N-204ENST00000549833 NUP160Q12769 1436 aa10.56□□□□□ -0.72
UBE2N-204ENST00000549833 PRXQ9BXM0 1461 aa10.55□□□□□ -0.72
UBE2N-204ENST00000549833 RPIAP49247 311 aa10.55□□□□□ -0.72
UBE2N-204ENST00000549833 KCNH2Q12809 1159 aa10.55□□□□□ -0.72
UBE2N-204ENST00000549833 PRKD2Q9BZL6 878 aa10.55□□□□□ -0.72
UBE2N-204ENST00000549833 EVA1BQ9NVM1 165 aa10.55□□□□□ -0.72
UBE2N-204ENST00000549833 V9GY48 417 aaPredicted RBP10.55□□□□□ -0.72
UBE2N-204ENST00000549833 F12P00748 615 aaPredicted RBP10.54□□□□□ -0.72
UBE2N-204ENST00000549833 SLC19A1P41440 591 aa10.54□□□□□ -0.72
UBE2N-204ENST00000549833 BANK1Q8NDB2 785 aa10.54□□□□□ -0.72
UBE2N-204ENST00000549833 MAP10Q9P2G4 905 aa10.53□□□□□ -0.72
UBE2N-204ENST00000549833 SHROOM2Q13796 1616 aa10.52□□□□□ -0.73
UBE2N-204ENST00000549833 LIAT1Q6ZQX7 453 aa10.52□□□□□ -0.73
UBE2N-204ENST00000549833 LRRN4Q8WUT4 740 aa10.52□□□□□ -0.73
UBE2N-204ENST00000549833 UNC93B1Q9H1C4 597 aa10.52□□□□□ -0.73
UBE2N-204ENST00000549833 RIMBP3CA6NJZ7 1639 aa10.51□□□□□ -0.73
UBE2N-204ENST00000549833 RIMBP3BA6NNM3 1639 aa10.51□□□□□ -0.73
UBE2N-204ENST00000549833 RIMBP3Q9UFD9 1639 aa10.51□□□□□ -0.73
UBE2N-204ENST00000549833 APBB1O00213 710 aa10.5□□□□□ -0.73
UBE2N-204ENST00000549833 TRIM32Q13049 653 aa10.5□□□□□ -0.73
UBE2N-204ENST00000549833 EMID1Q96A84 441 aaPredicted RBP10.5□□□□□ -0.73
UBE2N-204ENST00000549833 IQGAP2Q13576 1575 aa10.5□□□□□ -0.73
UBE2N-204ENST00000549833 CD2BP2O95400 341 aaKnown RBP10.49□□□□□ -0.73
UBE2N-204ENST00000549833 SPRYD7Q5W111 196 aa10.49□□□□□ -0.73
UBE2N-204ENST00000549833 KIAA0586Q9BVV6 1533 aa10.48□□□□□ -0.73
UBE2N-204ENST00000549833 ERCC6L2Q5T890 1561 aa10.48□□□□□ -0.73
UBE2N-204ENST00000549833 SOCS7O14512 581 aa10.48□□□□□ -0.73
UBE2N-204ENST00000549833 PTCRAQ6ISU1 281 aaPredicted RBP10.48□□□□□ -0.73
UBE2N-204ENST00000549833 PNMA1Q8ND90 353 aa10.48□□□□□ -0.73
UBE2N-204ENST00000549833 ARMC2Q8NEN0 867 aa10.48□□□□□ -0.73
UBE2N-204ENST00000549833 ARHGEF11O15085 1522 aa10.48□□□□□ -0.73
UBE2N-204ENST00000549833 HMX1Q9NP08 348 aaPredicted RBP10.47□□□□□ -0.73
UBE2N-204ENST00000549833 NR6A1Q15406 480 aa10.46□□□□□ -0.73
UBE2N-204ENST00000549833 ZNF697Q5TEC3 545 aa10.46□□□□□ -0.73
UBE2N-204ENST00000549833 NBPF14Q5TI25 921 aa10.46□□□□□ -0.73
UBE2N-204ENST00000549833 ERICH6Q7L0X2 663 aa10.46□□□□□ -0.73
UBE2N-204ENST00000549833 ZNF598Q86UK7 904 aaKnown RBP10.46□□□□□ -0.73
UBE2N-204ENST00000549833 GOLGA3Q08378 1498 aa10.46□□□□□ -0.74
UBE2N-204ENST00000549833 WNT7BP56706 349 aa10.45□□□□□ -0.74
UBE2N-204ENST00000549833 LINC01559Q495D7 138 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms