RNA–Protein interactions for RNA: ENST00000549417.5

LIN7A-202, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 905 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-202ENST00000549417 RNF39Q9H2S5 420 aa10.51□□□□□ -0.73
LIN7A-202ENST00000549417 KIF1BO60333 1816 aa10.51□□□□□ -0.73
LIN7A-202ENST00000549417 PLEKHH1Q9ULM0 1364 aa10.51□□□□□ -0.73
LIN7A-202ENST00000549417 MYOM1P52179 1685 aa10.5□□□□□ -0.73
LIN7A-202ENST00000549417 VGFO15240 615 aaPredicted RBP10.5□□□□□ -0.73
LIN7A-202ENST00000549417 GIGYF1O75420 1035 aaPredicted RBP10.5□□□□□ -0.73
LIN7A-202ENST00000549417 ZBTB7AO95365 584 aa10.5□□□□□ -0.73
LIN7A-202ENST00000549417 PHF8Q9UPP1 1060 aa10.5□□□□□ -0.73
LIN7A-202ENST00000549417 GOLGB1Q14789 3259 aaKnown RBP10.5□□□□□ -0.73
LIN7A-202ENST00000549417 COL14A1Q05707 1796 aaKnown RBP10.49□□□□□ -0.73
LIN7A-202ENST00000549417 USP35Q9P2H5 1018 aa10.49□□□□□ -0.73
LIN7A-202ENST00000549417 ARHGEF10O15013 1369 aa10.49□□□□□ -0.73
LIN7A-202ENST00000549417 STRN4Q9NRL3 753 aa10.48□□□□□ -0.73
LIN7A-202ENST00000549417 ATF5Q9Y2D1 282 aaPredicted RBP10.48□□□□□ -0.73
LIN7A-202ENST00000549417 SBNO1A3KN83 1393 aa10.48□□□□□ -0.73
LIN7A-202ENST00000549417 PMFBP1Q8TBY8 1022 aa10.47□□□□□ -0.73
LIN7A-202ENST00000549417 FHDC1Q9C0D6 1143 aaPredicted RBP10.47□□□□□ -0.73
LIN7A-202ENST00000549417 ANO8Q9HCE9 1232 aaPredicted RBP10.47□□□□□ -0.73
LIN7A-202ENST00000549417 CASZ1Q86V15 1759 aa10.47□□□□□ -0.73
LIN7A-202ENST00000549417 LOC105371045A0A1W2PR82 267 aa10.46□□□□□ -0.73
LIN7A-202ENST00000549417 PTGER2P43116 358 aa10.46□□□□□ -0.73
LIN7A-202ENST00000549417 PDE3BQ13370 1112 aa10.46□□□□□ -0.73
LIN7A-202ENST00000549417 SYT17Q9BSW7 474 aa10.46□□□□□ -0.73
LIN7A-202ENST00000549417 SPATA31A1Q5TZJ5 1347 aa10.46□□□□□ -0.73
LIN7A-202ENST00000549417 IFT172Q9UG01 1749 aa10.45□□□□□ -0.74
LIN7A-202ENST00000549417 TECPR2O15040 1411 aa10.45□□□□□ -0.74
LIN7A-202ENST00000549417 ITGAEP38570 1179 aa10.45□□□□□ -0.74
LIN7A-202ENST00000549417 TMEM132EQ6IEE7 984 aa10.45□□□□□ -0.74
LIN7A-202ENST00000549417 PRDM11Q9NQV5 511 aa10.45□□□□□ -0.74
LIN7A-202ENST00000549417 PPLO60437 1756 aa10.44□□□□□ -0.74
LIN7A-202ENST00000549417 NRXN1Q9ULB1 1477 aa10.44□□□□□ -0.74
LIN7A-202ENST00000549417 CHRNA2Q15822 529 aa10.44□□□□□ -0.74
LIN7A-202ENST00000549417 RRBP1Q9P2E9 1410 aaKnown RBP10.43□□□□□ -0.74
LIN7A-202ENST00000549417 SAFB2Q14151 953 aaKnown RBP eCLIP10.43□□□□□ -0.74
LIN7A-202ENST00000549417 C1QBPQ07021 282 aaKnown RBP10.42□□□□□ -0.74
LIN7A-202ENST00000549417 BCL11BQ9C0K0 894 aaPredicted RBP10.42□□□□□ -0.74
LIN7A-202ENST00000549417 TRPM3Q9HCF6 1732 aaPredicted RBP10.41□□□□□ -0.74
LIN7A-202ENST00000549417 ROCK1Q13464 1354 aa10.41□□□□□ -0.74
LIN7A-202ENST00000549417 ADGRF5Q8IZF2 1346 aa10.41□□□□□ -0.74
LIN7A-202ENST00000549417 GPR162Q16538 588 aa10.41□□□□□ -0.74
LIN7A-202ENST00000549417 ALS2Q96Q42 1657 aa10.41□□□□□ -0.74
LIN7A-202ENST00000549417 KIAA0232Q92628 1395 aa10.4□□□□□ -0.74
LIN7A-202ENST00000549417 RPGRIP1LQ68CZ1 1315 aa10.4□□□□□ -0.74
LIN7A-202ENST00000549417 PAK3O75914 559 aaPredicted RBP10.4□□□□□ -0.74
LIN7A-202ENST00000549417 PTF1AQ7RTS3 328 aa10.4□□□□□ -0.74
LIN7A-202ENST00000549417 PELP1Q8IZL8 1130 aaKnown RBP10.4□□□□□ -0.74
LIN7A-202ENST00000549417 ABCC11Q96J66 1382 aa10.39□□□□□ -0.75
LIN7A-202ENST00000549417 DLC1Q96QB1 1528 aa10.39□□□□□ -0.75
LIN7A-202ENST00000549417 KNDC1Q76NI1 1749 aa10.39□□□□□ -0.75
LIN7A-202ENST00000549417 EVA1CP58658 441 aa10.39□□□□□ -0.75
LIN7A-202ENST00000549417 ZC3H6P61129 1189 aaKnown RBP10.39□□□□□ -0.75
LIN7A-202ENST00000549417 SHANK3Q9BYB0 1731 aa10.38□□□□□ -0.75
LIN7A-202ENST00000549417 CRYBG1Q9Y4K1 1723 aa10.38□□□□□ -0.75
LIN7A-202ENST00000549417 LARP1Q6PKG0 1096 aaKnown RBP10.38□□□□□ -0.75
LIN7A-202ENST00000549417 CAPN15O75808 1086 aa10.37□□□□□ -0.75
LIN7A-202ENST00000549417 BARGINQ6ZT62 677 aa10.37□□□□□ -0.75
LIN7A-202ENST00000549417 KLHL34Q8N239 644 aa10.37□□□□□ -0.75
LIN7A-202ENST00000549417 PROM2Q8N271 834 aa10.37□□□□□ -0.75
LIN7A-202ENST00000549417 YTHDC2Q9H6S0 1430 aaKnown RBP10.37□□□□□ -0.75
LIN7A-202ENST00000549417 GPRASP1Q5JY77 1395 aa10.37□□□□□ -0.75
LIN7A-202ENST00000549417 RGL3Q3MIN7 710 aa10.36□□□□□ -0.75
LIN7A-202ENST00000549417 NUTM2GQ5VZR2 741 aa10.36□□□□□ -0.75
LIN7A-202ENST00000549417 TCP11L2Q8N4U5 519 aa10.36□□□□□ -0.75
LIN7A-202ENST00000549417 ARXQ96QS3 562 aa10.36□□□□□ -0.75
LIN7A-202ENST00000549417 ACIN1Q9UKV3 1341 aaKnown RBP10.35□□□□□ -0.75
LIN7A-202ENST00000549417 SBF2Q86WG5 1849 aa10.35□□□□□ -0.75
LIN7A-202ENST00000549417 SSH2Q76I76 1423 aa10.35□□□□□ -0.75
LIN7A-202ENST00000549417 RGPD3A6NKT7 1758 aaPredicted RBP10.35□□□□□ -0.75
LIN7A-202ENST00000549417 RGPD4Q7Z3J3 1758 aa10.35□□□□□ -0.75
LIN7A-202ENST00000549417 PLSCR1O15162 318 aa10.35□□□□□ -0.75
LIN7A-202ENST00000549417 SGIP1Q9BQI5 828 aa10.35□□□□□ -0.75
LIN7A-202ENST00000549417 MTFR1LQ9H019 292 aa10.35□□□□□ -0.75
LIN7A-202ENST00000549417 STK32BQ9NY57 414 aa10.35□□□□□ -0.75
LIN7A-202ENST00000549417 KCNA4P22459 653 aa10.34□□□□□ -0.75
LIN7A-202ENST00000549417 PRAM1Q96QH2 718 aa10.34□□□□□ -0.75
LIN7A-202ENST00000549417 HIRIP3Q9BW71 556 aaPredicted RBP10.34□□□□□ -0.75
LIN7A-202ENST00000549417 PHRF1Q9P1Y6 1649 aaKnown RBP10.33□□□□□ -0.76
LIN7A-202ENST00000549417 PEAK1Q9H792 1746 aa10.33□□□□□ -0.76
LIN7A-202ENST00000549417 HSPA6P17066 643 aa10.33□□□□□ -0.76
LIN7A-202ENST00000549417 SLC15A2Q16348 729 aa10.33□□□□□ -0.76
LIN7A-202ENST00000549417 OVOS2A0A0G2JMS6 1433 aa10.33□□□□□ -0.76
LIN7A-202ENST00000549417 OVOS2A0A0J9YW53 1432 aa10.33□□□□□ -0.76
LIN7A-202ENST00000549417 OVOS2Q6IE36 1432 aa10.33□□□□□ -0.76
LIN7A-202ENST00000549417 NGDNQ8NEJ9 315 aaKnown RBP10.32□□□□□ -0.76
LIN7A-202ENST00000549417 PARP4Q9UKK3 1724 aaKnown RBP10.32□□□□□ -0.76
LIN7A-202ENST00000549417 PRR36Q9H6K5 1346 aa10.32□□□□□ -0.76
LIN7A-202ENST00000549417 TXNRD1Q16881 649 aa10.31□□□□□ -0.76
LIN7A-202ENST00000549417 ZNF526Q8TF50 670 aaPredicted RBP10.31□□□□□ -0.76
LIN7A-202ENST00000549417 POGKQ9P215 609 aa10.31□□□□□ -0.76
LIN7A-202ENST00000549417 ANKARQ7Z5J8 1434 aa10.31□□□□□ -0.76
LIN7A-202ENST00000549417 PIK3C2GO75747 1445 aa10.3□□□□□ -0.76
LIN7A-202ENST00000549417 ATP10DQ9P241 1426 aa10.3□□□□□ -0.76
LIN7A-202ENST00000549417 NLGN2Q8NFZ4 835 aa10.29□□□□□ -0.76
LIN7A-202ENST00000549417 SIRT1Q96EB6 747 aa10.29□□□□□ -0.76
LIN7A-202ENST00000549417 MINK1Q8N4C8 1332 aaPredicted RBP10.29□□□□□ -0.76
LIN7A-202ENST00000549417 LRRC37A3O60309 1634 aa10.29□□□□□ -0.76
LIN7A-202ENST00000549417 MAP3K5Q99683 1374 aa10.28□□□□□ -0.76
LIN7A-202ENST00000549417 ZBTB7CA1YPR0 619 aa10.28□□□□□ -0.76
LIN7A-202ENST00000549417 YBX3P16989 372 aaKnown RBP eCLIP10.28□□□□□ -0.76
LIN7A-202ENST00000549417 DDB1Q16531 1140 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms