RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 MINK1Q8N4C8 1332 aaPredicted RBP29.47■■■□□ 2.31
GATC-202ENST00000548171 PRR36Q9H6K5 1346 aa29.47■■■□□ 2.31
GATC-202ENST00000548171 RGPD1P0DJD0 1748 aa29.47■■■□□ 2.31
GATC-202ENST00000548171 WASLO00401 505 aaPredicted RBP29.46■■■□□ 2.31
GATC-202ENST00000548171 BAG6P46379 1132 aa29.46■■■□□ 2.31
GATC-202ENST00000548171 FAM98CQ17RN3 349 aaKnown RBP29.46■■■□□ 2.31
GATC-202ENST00000548171 ARHGEF28Q8N1W1 1705 aaKnown RBP29.43■■■□□ 2.3
GATC-202ENST00000548171 NGDNQ8NEJ9 315 aaKnown RBP29.43■■■□□ 2.3
GATC-202ENST00000548171 DCAF11Q8TEB1 546 aa29.43■■■□□ 2.3
GATC-202ENST00000548171 KDM2AQ9Y2K7 1162 aa29.42■■■□□ 2.3
GATC-202ENST00000548171 SPATA31A5Q5VU36 1347 aa29.41■■■□□ 2.3
GATC-202ENST00000548171 SPATA31A7Q8IWB4 1347 aa29.41■■■□□ 2.3
GATC-202ENST00000548171 THSD7AQ9UPZ6 1657 aa29.4■■■□□ 2.3
GATC-202ENST00000548171 PAK3O75914 559 aaPredicted RBP29.38■■■□□ 2.29
GATC-202ENST00000548171 PRDM11Q9NQV5 511 aa29.37■■■□□ 2.29
GATC-202ENST00000548171 ATP7BP35670 1465 aa29.36■■■□□ 2.29
GATC-202ENST00000548171 PHRF1Q9P1Y6 1649 aaKnown RBP29.35■■■□□ 2.29
GATC-202ENST00000548171 TNS1Q9HBL0 1735 aaKnown RBP29.34■■■□□ 2.29
GATC-202ENST00000548171 DISP2A7MBM2 1401 aa29.33■■■□□ 2.29
GATC-202ENST00000548171 NUDT16Q96DE0 195 aaKnown RBP29.32■■■□□ 2.28
GATC-202ENST00000548171 TOPAZ1Q8N9V7 1692 aa29.31■■■□□ 2.28
GATC-202ENST00000548171 PSDA5PKW4 1024 aaPredicted RBP29.3■■■□□ 2.28
GATC-202ENST00000548171 KIAA0232Q92628 1395 aa29.29■■■□□ 2.28
GATC-202ENST00000548171 SPATA31A1Q5TZJ5 1347 aa29.29■■■□□ 2.28
GATC-202ENST00000548171 HRCP23327 699 aa29.29■■■□□ 2.28
GATC-202ENST00000548171 EN1Q05925 392 aaPredicted RBP29.29■■■□□ 2.28
GATC-202ENST00000548171 KIAA1210Q9ULL0 1709 aa29.28■■■□□ 2.28
GATC-202ENST00000548171 FAM182BQ5T319 152 aa29.27■■■□□ 2.28
GATC-202ENST00000548171 POLR3AO14802 1390 aaPredicted RBP29.26■■■□□ 2.28
GATC-202ENST00000548171 FAM196AQ6ZSG2 479 aa29.24■■■□□ 2.27
GATC-202ENST00000548171 CDK19Q9BWU1 502 aa29.24■■■□□ 2.27
GATC-202ENST00000548171 CHRNA2Q15822 529 aa29.22■■■□□ 2.27
GATC-202ENST00000548171 STRN4Q9NRL3 753 aa29.22■■■□□ 2.27
GATC-202ENST00000548171 CCDC61Q9Y6R9 512 aa29.22■■■□□ 2.27
GATC-202ENST00000548171 ACEP12821 1306 aa29.2■■■□□ 2.27
GATC-202ENST00000548171 ZC3H6P61129 1189 aaKnown RBP29.2■■■□□ 2.26
GATC-202ENST00000548171 NBPF8Q3BBV2 869 aa29.2■■■□□ 2.26
GATC-202ENST00000548171 NRKQ7Z2Y5 1582 aa29.19■■■□□ 2.26
GATC-202ENST00000548171 PARD3Q8TEW0 1356 aa29.19■■■□□ 2.26
GATC-202ENST00000548171 PLEKHG3A1L390 1219 aa29.19■■■□□ 2.26
GATC-202ENST00000548171 R3HDM1Q15032 1099 aaKnown RBP29.18■■■□□ 2.26
GATC-202ENST00000548171 BARGINQ6ZT62 677 aa29.18■■■□□ 2.26
GATC-202ENST00000548171 SSH2Q76I76 1423 aa29.18■■■□□ 2.26
GATC-202ENST00000548171 EVA1CP58658 441 aa29.17■■■□□ 2.26
GATC-202ENST00000548171 NUTM2GQ5VZR2 741 aa29.17■■■□□ 2.26
GATC-202ENST00000548171 EZH2Q15910 746 aaKnown RBP29.16■■■□□ 2.26
GATC-202ENST00000548171 LMO7Q8WWI1 1683 aa29.15■■■□□ 2.26
GATC-202ENST00000548171 CPDO75976 1380 aa29.15■■■□□ 2.26
GATC-202ENST00000548171 TRIM37O94972 964 aa29.15■■■□□ 2.26
GATC-202ENST00000548171 CAMKK2Q96RR4 588 aa29.15■■■□□ 2.26
GATC-202ENST00000548171 CAMTA1Q9Y6Y1 1673 aa29.15■■■□□ 2.26
GATC-202ENST00000548171 ABTB2Q8N961 1025 aa29.14■■■□□ 2.26
GATC-202ENST00000548171 USP35Q9P2H5 1018 aa29.14■■■□□ 2.26
GATC-202ENST00000548171 RREB1Q92766 1687 aa29.13■■■□□ 2.25
GATC-202ENST00000548171 PDE3BQ13370 1112 aa29.12■■■□□ 2.25
GATC-202ENST00000548171 USP19O94966 1318 aa29.12■■■□□ 2.25
GATC-202ENST00000548171 APBA3O96018 575 aa29.11■■■□□ 2.25
GATC-202ENST00000548171 TCP11L2Q8N4U5 519 aa29.1■■■□□ 2.25
GATC-202ENST00000548171 NLRP13Q86W25 1043 aa29.09■■■□□ 2.25
GATC-202ENST00000548171 BRD4O60885 1362 aaPredicted RBP29.09■■■□□ 2.25
GATC-202ENST00000548171 PARP4Q9UKK3 1724 aaKnown RBP29.08■■■□□ 2.25
GATC-202ENST00000548171 LARP1Q6PKG0 1096 aaKnown RBP29.08■■■□□ 2.25
GATC-202ENST00000548171 THRAP3Q9Y2W1 955 aaKnown RBP29.08■■■□□ 2.25
GATC-202ENST00000548171 NUP188Q5SRE5 1749 aa29.08■■■□□ 2.25
GATC-202ENST00000548171 PPIP5K1Q6PFW1 1433 aa29.07■■■□□ 2.24
GATC-202ENST00000548171 SRPK2P78362 688 aaKnown RBP29.06■■■□□ 2.24
GATC-202ENST00000548171 QRICH2Q9H0J4 1663 aa29.05■■■□□ 2.24
GATC-202ENST00000548171 GCP02774 474 aa29.04■■■□□ 2.24
GATC-202ENST00000548171 NBPF1Q3BBV0 1214 aa29.04■■■□□ 2.24
GATC-202ENST00000548171 COL5A2P05997 1499 aaPredicted RBP29.04■■■□□ 2.24
GATC-202ENST00000548171 CENPJQ9HC77 1338 aaPredicted RBP29.03■■■□□ 2.24
GATC-202ENST00000548171 C11orf95C9JLR9 678 aaPredicted RBP29.03■■■□□ 2.24
GATC-202ENST00000548171 NBPF14Q5TI25 921 aa29.01■■■□□ 2.23
GATC-202ENST00000548171 CRB1P82279 1406 aa28.99■■■□□ 2.23
GATC-202ENST00000548171 CABP2Q9NPB3 220 aa28.98■■■□□ 2.23
GATC-202ENST00000548171 RGPD3A6NKT7 1758 aaPredicted RBP28.98■■■□□ 2.23
GATC-202ENST00000548171 RGPD4Q7Z3J3 1758 aa28.98■■■□□ 2.23
GATC-202ENST00000548171 USP6P35125 1406 aa28.96■■■□□ 2.23
GATC-202ENST00000548171 SLIT3O75094 1523 aa28.96■■■□□ 2.23
GATC-202ENST00000548171 PEAK1Q9H792 1746 aa28.96■■■□□ 2.23
GATC-202ENST00000548171 SBF2Q86WG5 1849 aa28.96■■■□□ 2.23
GATC-202ENST00000548171 AATKQ6ZMQ8 1374 aa28.95■■■□□ 2.22
GATC-202ENST00000548171 OVOS2A0A0G2JMS6 1433 aa28.94■■■□□ 2.22
GATC-202ENST00000548171 OVOS2A0A0J9YW53 1432 aa28.94■■■□□ 2.22
GATC-202ENST00000548171 OVOS2Q6IE36 1432 aa28.94■■■□□ 2.22
GATC-202ENST00000548171 LRRC37A3O60309 1634 aa28.93■■■□□ 2.22
GATC-202ENST00000548171 WNK3Q9BYP7 1800 aa28.92■■■□□ 2.22
GATC-202ENST00000548171 NLRP6P59044 892 aa28.92■■■□□ 2.22
GATC-202ENST00000548171 CABP1Q9NZU7 370 aa28.92■■■□□ 2.22
GATC-202ENST00000548171 COL18A1P39060 1754 aa28.92■■■□□ 2.22
GATC-202ENST00000548171 PIK3C2AO00443 1686 aa28.91■■■□□ 2.22
GATC-202ENST00000548171 ZBTB7CA1YPR0 619 aa28.87■■■□□ 2.21
GATC-202ENST00000548171 AKAP12Q02952 1782 aa28.87■■■□□ 2.21
GATC-202ENST00000548171 TRPM1Q7Z4N2 1603 aa28.87■■■□□ 2.21
GATC-202ENST00000548171 DDB1Q16531 1140 aa28.86■■■□□ 2.21
GATC-202ENST00000548171 TOM1L2Q6ZVM7 507 aa28.86■■■□□ 2.21
GATC-202ENST00000548171 SPON1Q9HCB6 807 aa28.86■■■□□ 2.21
GATC-202ENST00000548171 EVC2Q86UK5 1308 aa28.86■■■□□ 2.21
GATC-202ENST00000548171 PLSCR1O15162 318 aa28.85■■■□□ 2.21
GATC-202ENST00000548171 CDCA7Q9BWT1 371 aaPredicted RBP28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms