RNA–Protein interactions for RNA: ENST00000548140.1

HECTD4-206, Transcript of HECT domain E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HECTD4, Length 1,426 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HECTD4-206ENST00000548140 SCAF1Q9H7N4 1312 aaKnown RBP22.29■■□□□ 1.16
HECTD4-206ENST00000548140 PAK3O75914 559 aaPredicted RBP22.28■■□□□ 1.16
HECTD4-206ENST00000548140 ROBO1Q9Y6N7 1651 aa22.27■■□□□ 1.16
HECTD4-206ENST00000548140 AMER1Q5JTC6 1135 aaPredicted RBP22.27■■□□□ 1.16
HECTD4-206ENST00000548140 CC2D1BQ5T0F9 858 aaKnown RBP22.27■■□□□ 1.16
HECTD4-206ENST00000548140 SSH2Q76I76 1423 aa22.26■■□□□ 1.15
HECTD4-206ENST00000548140 BRD4O60885 1362 aaPredicted RBP22.26■■□□□ 1.15
HECTD4-206ENST00000548140 NRKQ7Z2Y5 1582 aa22.25■■□□□ 1.15
HECTD4-206ENST00000548140 TTC21AQ8NDW8 1320 aa22.25■■□□□ 1.15
HECTD4-206ENST00000548140 FYB1O15117 783 aa22.24■■□□□ 1.15
HECTD4-206ENST00000548140 ANP32CO43423 234 aa22.23■■□□□ 1.15
HECTD4-206ENST00000548140 NME9Q86XW9 330 aa22.23■■□□□ 1.15
HECTD4-206ENST00000548140 GGNBP2Q9H3C7 697 aa22.23■■□□□ 1.15
HECTD4-206ENST00000548140 NPC1L1Q9UHC9 1359 aa22.23■■□□□ 1.15
HECTD4-206ENST00000548140 SOS2Q07890 1332 aaPredicted RBP22.21■■□□□ 1.15
HECTD4-206ENST00000548140 PXDNQ92626 1479 aa22.21■■□□□ 1.15
HECTD4-206ENST00000548140 NHSL1Q5SYE7 1610 aa22.21■■□□□ 1.15
HECTD4-206ENST00000548140 NSD2O96028 1365 aa22.21■■□□□ 1.15
HECTD4-206ENST00000548140 LMOD2Q6P5Q4 547 aa22.21■■□□□ 1.15
HECTD4-206ENST00000548140 ABTB2Q8N961 1025 aa22.21■■□□□ 1.15
HECTD4-206ENST00000548140 ZRANB1Q9UGI0 708 aa22.2■■□□□ 1.14
HECTD4-206ENST00000548140 SBNO1A3KN83 1393 aa22.19■■□□□ 1.14
HECTD4-206ENST00000548140 KIF20BQ96Q89 1820 aa22.19■■□□□ 1.14
HECTD4-206ENST00000548140 NUTM2GQ5VZR2 741 aa22.19■■□□□ 1.14
HECTD4-206ENST00000548140 TRPM3Q9HCF6 1732 aaPredicted RBP22.19■■□□□ 1.14
HECTD4-206ENST00000548140 MORC1Q86VD1 984 aa22.18■■□□□ 1.14
HECTD4-206ENST00000548140 COG3Q96JB2 828 aa22.18■■□□□ 1.14
HECTD4-206ENST00000548140 PRKRIP1Q9H875 184 aaPredicted RBP22.18■■□□□ 1.14
HECTD4-206ENST00000548140 NLRP6P59044 892 aa22.17■■□□□ 1.14
HECTD4-206ENST00000548140 AHDC1Q5TGY3 1603 aaPredicted RBP22.17■■□□□ 1.14
HECTD4-206ENST00000548140 SPATA31A3Q5VYP0 1347 aa22.16■■□□□ 1.14
HECTD4-206ENST00000548140 TNS3Q68CZ2 1445 aa22.16■■□□□ 1.14
HECTD4-206ENST00000548140 PIK3C2AO00443 1686 aa22.16■■□□□ 1.14
HECTD4-206ENST00000548140 RALBP1Q15311 655 aa22.15■■□□□ 1.14
HECTD4-206ENST00000548140 NLRP13Q86W25 1043 aa22.14■■□□□ 1.14
HECTD4-206ENST00000548140 TNNT2P45379 298 aaPredicted RBP22.14■■□□□ 1.13
HECTD4-206ENST00000548140 USP31Q70CQ4 1352 aa22.14■■□□□ 1.13
HECTD4-206ENST00000548140 PARD3Q8TEW0 1356 aa22.14■■□□□ 1.13
HECTD4-206ENST00000548140 LRRC59Q96AG4 307 aaKnown RBP22.13■■□□□ 1.13
HECTD4-206ENST00000548140 PHLPP1O60346 1717 aa22.12■■□□□ 1.13
HECTD4-206ENST00000548140 ANKRD26Q9UPS8 1709 aa22.12■■□□□ 1.13
HECTD4-206ENST00000548140 ALS2Q96Q42 1657 aa22.12■■□□□ 1.13
HECTD4-206ENST00000548140 OVOS2A0A0J9YW53 1432 aa22.12■■□□□ 1.13
HECTD4-206ENST00000548140 OVOS2Q6IE36 1432 aa22.12■■□□□ 1.13
HECTD4-206ENST00000548140 ARHGEF10O15013 1369 aa22.12■■□□□ 1.13
HECTD4-206ENST00000548140 PLEKHG5O94827 1062 aa22.12■■□□□ 1.13
HECTD4-206ENST00000548140 MIER1Q8N108 512 aa22.12■■□□□ 1.13
HECTD4-206ENST00000548140 SOX12O15370 315 aa22.08■■□□□ 1.13
HECTD4-206ENST00000548140 COL16A1Q07092 1604 aaPredicted RBP22.08■■□□□ 1.12
HECTD4-206ENST00000548140 MYBBP1AQ9BQG0 1328 aaKnown RBP22.08■■□□□ 1.12
HECTD4-206ENST00000548140 FBLN1P23142 703 aa22.06■■□□□ 1.12
HECTD4-206ENST00000548140 PPP2R1AP30153 589 aa22.06■■□□□ 1.12
HECTD4-206ENST00000548140 USP54Q70EL1 1684 aa22.06■■□□□ 1.12
HECTD4-206ENST00000548140 MARF1Q9Y4F3 1742 aaKnown RBP22.06■■□□□ 1.12
HECTD4-206ENST00000548140 USP19O94966 1318 aa22.05■■□□□ 1.12
HECTD4-206ENST00000548140 CABLES1Q8TDN4 633 aa22.05■■□□□ 1.12
HECTD4-206ENST00000548140 KCNH5Q8NCM2 988 aa22.04■■□□□ 1.12
HECTD4-206ENST00000548140 GCP02774 474 aa22.03■■□□□ 1.12
HECTD4-206ENST00000548140 HSPA1LP34931 641 aa22.03■■□□□ 1.12
HECTD4-206ENST00000548140 MED1Q15648 1581 aaPredicted RBP22.03■■□□□ 1.12
HECTD4-206ENST00000548140 AATKQ6ZMQ8 1374 aa22.02■■□□□ 1.12
HECTD4-206ENST00000548140 PNPLA6Q8IY17 1366 aa22.02■■□□□ 1.12
HECTD4-206ENST00000548140 SLIT3O75094 1523 aa22.02■■□□□ 1.11
HECTD4-206ENST00000548140 HAP1P54257 671 aaPredicted RBP22.01■■□□□ 1.11
HECTD4-206ENST00000548140 RRS1Q15050 365 aaKnown RBP22.01■■□□□ 1.11
HECTD4-206ENST00000548140 MTHFSP49914 203 aa21.99■■□□□ 1.11
HECTD4-206ENST00000548140 POLKQ9UBT6 870 aa21.99■■□□□ 1.11
HECTD4-206ENST00000548140 PPM1GO15355 546 aaPredicted RBP21.98■■□□□ 1.11
HECTD4-206ENST00000548140 EMILIN1Q9Y6C2 1016 aa21.98■■□□□ 1.11
HECTD4-206ENST00000548140 PHRF1Q9P1Y6 1649 aaKnown RBP21.98■■□□□ 1.11
HECTD4-206ENST00000548140 ZBTB7CA1YPR0 619 aa21.97■■□□□ 1.11
HECTD4-206ENST00000548140 NFAT5O94916 1531 aa21.97■■□□□ 1.11
HECTD4-206ENST00000548140 CRYBG1Q9Y4K1 1723 aa21.97■■□□□ 1.11
HECTD4-206ENST00000548140 CCER2I3L3R5 266 aa21.97■■□□□ 1.11
HECTD4-206ENST00000548140 ZC3H6P61129 1189 aaKnown RBP21.97■■□□□ 1.11
HECTD4-206ENST00000548140 MAP2P11137 1827 aaKnown RBP21.97■■□□□ 1.11
HECTD4-206ENST00000548140 MAP3K19Q56UN5 1328 aa21.96■■□□□ 1.11
HECTD4-206ENST00000548140 JCADQ9P266 1359 aa21.96■■□□□ 1.11
HECTD4-206ENST00000548140 COL22A1Q8NFW1 1626 aaPredicted RBP21.95■■□□□ 1.1
HECTD4-206ENST00000548140 AMPHP49418 695 aa21.95■■□□□ 1.1
HECTD4-206ENST00000548140 CCDC184Q52MB2 194 aa21.95■■□□□ 1.1
HECTD4-206ENST00000548140 ARHGEF25Q86VW2 580 aa21.94■■□□□ 1.1
HECTD4-206ENST00000548140 MRS2Q9HD23 443 aa21.94■■□□□ 1.1
HECTD4-206ENST00000548140 CFAP53Q96M91 514 aa21.93■■□□□ 1.1
HECTD4-206ENST00000548140 SMG6Q86US8 1419 aaKnown RBP21.93■■□□□ 1.1
HECTD4-206ENST00000548140 SHPRHQ149N8 1683 aa21.92■■□□□ 1.1
HECTD4-206ENST00000548140 ABCA3Q99758 1704 aa21.92■■□□□ 1.1
HECTD4-206ENST00000548140 NUTM2BA6NNL0 878 aaPredicted RBP21.91■■□□□ 1.1
HECTD4-206ENST00000548140 NUTM2EB1AL46 878 aaPredicted RBP21.91■■□□□ 1.1
HECTD4-206ENST00000548140 NUTM2AQ8IVF1 878 aaPredicted RBP21.91■■□□□ 1.1
HECTD4-206ENST00000548140 KIAA0232Q92628 1395 aa21.9■■□□□ 1.1
HECTD4-206ENST00000548140 LTN1O94822 1766 aa21.9■■□□□ 1.1
HECTD4-206ENST00000548140 CPDO75976 1380 aa21.89■■□□□ 1.1
HECTD4-206ENST00000548140 CDK12Q9NYV4 1490 aaPredicted RBP21.89■■□□□ 1.09
HECTD4-206ENST00000548140 FLT4P35916 1363 aa21.89■■□□□ 1.09
HECTD4-206ENST00000548140 KIF24Q5T7B8 1368 aa21.89■■□□□ 1.09
HECTD4-206ENST00000548140 HOXC9P31274 260 aa21.89■■□□□ 1.09
HECTD4-206ENST00000548140 IP6K1Q92551 441 aa21.89■■□□□ 1.09
HECTD4-206ENST00000548140 PRDM11Q9NQV5 511 aa21.89■■□□□ 1.09
HECTD4-206ENST00000548140 PEAK1Q9H792 1746 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms