RNA–Protein interactions for RNA: ENST00000548015.1

KRT18-204, Transcript of keratin 18, humanhuman

TSL 2

Gene KRT18, Length 928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-204ENST00000548015 CCDC61Q9Y6R9 512 aa15.95■□□□□ 0.14
KRT18-204ENST00000548015 SPATA31A5Q5VU36 1347 aa15.94■□□□□ 0.14
KRT18-204ENST00000548015 SPATA31A7Q8IWB4 1347 aa15.94■□□□□ 0.14
KRT18-204ENST00000548015 ACEP12821 1306 aa15.93■□□□□ 0.14
KRT18-204ENST00000548015 NUTM2GQ5VZR2 741 aa15.92■□□□□ 0.14
KRT18-204ENST00000548015 PRDM11Q9NQV5 511 aa15.92■□□□□ 0.14
KRT18-204ENST00000548015 ATP7BP35670 1465 aa15.91■□□□□ 0.14
KRT18-204ENST00000548015 CHRNA2Q15822 529 aa15.91■□□□□ 0.14
KRT18-204ENST00000548015 POLR3AO14802 1390 aaPredicted RBP15.9■□□□□ 0.14
KRT18-204ENST00000548015 KIAA0232Q92628 1395 aa15.9■□□□□ 0.14
KRT18-204ENST00000548015 A0A0G2JS52 829 aa15.89■□□□□ 0.13
KRT18-204ENST00000548015 ZC3H6P61129 1189 aaKnown RBP15.89■□□□□ 0.13
KRT18-204ENST00000548015 MYT1Q01538 1121 aa15.89■□□□□ 0.13
KRT18-204ENST00000548015 SF3B2Q13435 895 aaKnown RBP15.89■□□□□ 0.13
KRT18-204ENST00000548015 FAM182BQ5T319 152 aa15.89■□□□□ 0.13
KRT18-204ENST00000548015 L3MBTL2Q969R5 705 aa15.89■□□□□ 0.13
KRT18-204ENST00000548015 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.88■□□□□ 0.13
KRT18-204ENST00000548015 RGPD8O14715 1765 aaPredicted RBP15.88■□□□□ 0.13
KRT18-204ENST00000548015 CABP2Q9NPB3 220 aa15.88■□□□□ 0.13
KRT18-204ENST00000548015 MARF1Q9Y4F3 1742 aaKnown RBP15.87■□□□□ 0.13
KRT18-204ENST00000548015 SPATA31A1Q5TZJ5 1347 aa15.87■□□□□ 0.13
KRT18-204ENST00000548015 TRPM3Q9HCF6 1732 aaPredicted RBP15.86■□□□□ 0.13
KRT18-204ENST00000548015 ABTB2Q8N961 1025 aa15.86■□□□□ 0.13
KRT18-204ENST00000548015 SIN3AQ96ST3 1273 aa15.86■□□□□ 0.13
KRT18-204ENST00000548015 STRN4Q9NRL3 753 aa15.86■□□□□ 0.13
KRT18-204ENST00000548015 CENPJQ9HC77 1338 aaPredicted RBP15.86■□□□□ 0.13
KRT18-204ENST00000548015 SRPK2P78362 688 aaKnown RBP15.85■□□□□ 0.13
KRT18-204ENST00000548015 ALS2Q96Q42 1657 aa15.83■□□□□ 0.13
KRT18-204ENST00000548015 BAG6P46379 1132 aa15.83■□□□□ 0.12
KRT18-204ENST00000548015 EN1Q05925 392 aaPredicted RBP15.83■□□□□ 0.12
KRT18-204ENST00000548015 CABP1Q9NZU7 370 aa15.83■□□□□ 0.12
KRT18-204ENST00000548015 USP19O94966 1318 aa15.83■□□□□ 0.12
KRT18-204ENST00000548015 GCP02774 474 aa15.82■□□□□ 0.12
KRT18-204ENST00000548015 EVA1CP58658 441 aa15.82■□□□□ 0.12
KRT18-204ENST00000548015 LARP1Q6PKG0 1096 aaKnown RBP15.82■□□□□ 0.12
KRT18-204ENST00000548015 BARGINQ6ZT62 677 aa15.81■□□□□ 0.12
KRT18-204ENST00000548015 USP35Q9P2H5 1018 aa15.81■□□□□ 0.12
KRT18-204ENST00000548015 NWD2Q9ULI1 1742 aa15.81■□□□□ 0.12
KRT18-204ENST00000548015 PPIP5K1Q6PFW1 1433 aa15.8■□□□□ 0.12
KRT18-204ENST00000548015 CPDO75976 1380 aa15.8■□□□□ 0.12
KRT18-204ENST00000548015 NLRP13Q86W25 1043 aa15.8■□□□□ 0.12
KRT18-204ENST00000548015 ABCA3Q99758 1704 aa15.8■□□□□ 0.12
KRT18-204ENST00000548015 PLCH1Q4KWH8 1693 aa15.79■□□□□ 0.12
KRT18-204ENST00000548015 PSDA5PKW4 1024 aaPredicted RBP15.79■□□□□ 0.12
KRT18-204ENST00000548015 NEUROD1Q13562 356 aa15.79■□□□□ 0.12
KRT18-204ENST00000548015 FAM196AQ6ZSG2 479 aa15.79■□□□□ 0.12
KRT18-204ENST00000548015 SSH2Q76I76 1423 aa15.78■□□□□ 0.12
KRT18-204ENST00000548015 COL14A1Q05707 1796 aaKnown RBP15.78■□□□□ 0.12
KRT18-204ENST00000548015 ARHGEF28Q8N1W1 1705 aaKnown RBP15.78■□□□□ 0.12
KRT18-204ENST00000548015 TCP11L2Q8N4U5 519 aa15.78■□□□□ 0.12
KRT18-204ENST00000548015 NRAPQ86VF7 1730 aa15.77■□□□□ 0.12
KRT18-204ENST00000548015 TRIM37O94972 964 aa15.77■□□□□ 0.12
KRT18-204ENST00000548015 NLRP6P59044 892 aa15.77■□□□□ 0.12
KRT18-204ENST00000548015 EZH2Q15910 746 aaKnown RBP15.77■□□□□ 0.12
KRT18-204ENST00000548015 CAMKK2Q96RR4 588 aa15.77■□□□□ 0.12
KRT18-204ENST00000548015 BRD4O60885 1362 aaPredicted RBP15.76■□□□□ 0.11
KRT18-204ENST00000548015 CAMTA1Q9Y6Y1 1673 aa15.76■□□□□ 0.11
KRT18-204ENST00000548015 BRWD3Q6RI45 1802 aa15.75■□□□□ 0.11
KRT18-204ENST00000548015 DISP2A7MBM2 1401 aa15.75■□□□□ 0.11
KRT18-204ENST00000548015 EVC2Q86UK5 1308 aa15.74■□□□□ 0.11
KRT18-204ENST00000548015 PDE3BQ13370 1112 aa15.74■□□□□ 0.11
KRT18-204ENST00000548015 THRAP3Q9Y2W1 955 aaKnown RBP15.74■□□□□ 0.11
KRT18-204ENST00000548015 USP6P35125 1406 aa15.74■□□□□ 0.11
KRT18-204ENST00000548015 APBA3O96018 575 aa15.73■□□□□ 0.11
KRT18-204ENST00000548015 R3HDM1Q15032 1099 aaKnown RBP15.73■□□□□ 0.11
KRT18-204ENST00000548015 AXIN2Q9Y2T1 843 aa15.73■□□□□ 0.11
KRT18-204ENST00000548015 THSD7AQ9UPZ6 1657 aa15.72■□□□□ 0.11
KRT18-204ENST00000548015 AATKQ6ZMQ8 1374 aa15.72■□□□□ 0.11
KRT18-204ENST00000548015 KIAA1210Q9ULL0 1709 aa15.71■□□□□ 0.11
KRT18-204ENST00000548015 CRYBG1Q9Y4K1 1723 aa15.71■□□□□ 0.11
KRT18-204ENST00000548015 TTC21BQ7Z4L5 1316 aa15.71■□□□□ 0.11
KRT18-204ENST00000548015 ZBTB7CA1YPR0 619 aa15.71■□□□□ 0.11
KRT18-204ENST00000548015 ZNF692Q9BU19 519 aaPredicted RBP15.71■□□□□ 0.11
KRT18-204ENST00000548015 ROCK2O75116 1388 aaKnown RBP15.71■□□□□ 0.11
KRT18-204ENST00000548015 ARHGEF25Q86VW2 580 aa15.7■□□□□ 0.1
KRT18-204ENST00000548015 COL5A2P05997 1499 aaPredicted RBP15.69■□□□□ 0.1
KRT18-204ENST00000548015 TOPAZ1Q8N9V7 1692 aa15.69■□□□□ 0.1
KRT18-204ENST00000548015 NRKQ7Z2Y5 1582 aa15.68■□□□□ 0.1
KRT18-204ENST00000548015 TOM1L2Q6ZVM7 507 aa15.66■□□□□ 0.1
KRT18-204ENST00000548015 CRB1P82279 1406 aa15.66■□□□□ 0.1
KRT18-204ENST00000548015 CPSF1Q10570 1443 aaKnown RBP15.66■□□□□ 0.1
KRT18-204ENST00000548015 ITSN1Q15811 1721 aa15.65■□□□□ 0.1
KRT18-204ENST00000548015 PHRF1Q9P1Y6 1649 aaKnown RBP15.65■□□□□ 0.1
KRT18-204ENST00000548015 PARD3Q8TEW0 1356 aa15.65■□□□□ 0.1
KRT18-204ENST00000548015 SOX12O15370 315 aa15.65■□□□□ 0.1
KRT18-204ENST00000548015 PTF1AQ7RTS3 328 aa15.65■□□□□ 0.1
KRT18-204ENST00000548015 KCNH5Q8NCM2 988 aa15.65■□□□□ 0.1
KRT18-204ENST00000548015 WDR17Q8IZU2 1322 aa15.65■□□□□ 0.1
KRT18-204ENST00000548015 TTC21AQ8NDW8 1320 aa15.65■□□□□ 0.1
KRT18-204ENST00000548015 SLIT3O75094 1523 aa15.64■□□□□ 0.09
KRT18-204ENST00000548015 LMO7Q8WWI1 1683 aa15.64■□□□□ 0.09
KRT18-204ENST00000548015 CARD11Q9BXL7 1154 aa15.64■□□□□ 0.09
KRT18-204ENST00000548015 DDB1Q16531 1140 aa15.63■□□□□ 0.09
KRT18-204ENST00000548015 MARCH10Q8NA82 808 aaPredicted RBP15.63■□□□□ 0.09
KRT18-204ENST00000548015 CARD10Q9BWT7 1032 aa15.63■□□□□ 0.09
KRT18-204ENST00000548015 C11orf95C9JLR9 678 aaPredicted RBP15.62■□□□□ 0.09
KRT18-204ENST00000548015 SLC12A5Q9H2X9 1139 aa15.62■□□□□ 0.09
KRT18-204ENST00000548015 KTN1Q86UP2 1357 aaKnown RBP15.62■□□□□ 0.09
KRT18-204ENST00000548015 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.61■□□□□ 0.09
KRT18-204ENST00000548015 SBNO2Q9Y2G9 1366 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms