RNA–Protein interactions for RNA: ENST00000547281.5

CDK4-204, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-204ENST00000547281 NUTM2GQ5VZR2 741 aa23.21■■□□□ 1.31
CDK4-204ENST00000547281 A0A0G2JS52 829 aa23.2■■□□□ 1.3
CDK4-204ENST00000547281 MYT1Q01538 1121 aa23.2■■□□□ 1.3
CDK4-204ENST00000547281 CCDC125Q86Z20 511 aa23.2■■□□□ 1.3
CDK4-204ENST00000547281 CABP2Q9NPB3 220 aa23.2■■□□□ 1.3
CDK4-204ENST00000547281 PRDM11Q9NQV5 511 aa23.2■■□□□ 1.3
CDK4-204ENST00000547281 TRPM3Q9HCF6 1732 aaPredicted RBP23.19■■□□□ 1.3
CDK4-204ENST00000547281 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.19■■□□□ 1.3
CDK4-204ENST00000547281 ABTB2Q8N961 1025 aa23.17■■□□□ 1.3
CDK4-204ENST00000547281 GLI3P10071 1580 aa23.17■■□□□ 1.3
CDK4-204ENST00000547281 ONECUT3O60422 494 aaPredicted RBP23.16■■□□□ 1.3
CDK4-204ENST00000547281 POLR3AO14802 1390 aaPredicted RBP23.15■■□□□ 1.3
CDK4-204ENST00000547281 ZC3H6P61129 1189 aaKnown RBP23.15■■□□□ 1.3
CDK4-204ENST00000547281 ITSN1Q15811 1721 aa23.15■■□□□ 1.3
CDK4-204ENST00000547281 ALS2Q96Q42 1657 aa23.15■■□□□ 1.3
CDK4-204ENST00000547281 FAM98CQ17RN3 349 aaKnown RBP23.14■■□□□ 1.29
CDK4-204ENST00000547281 KRT27Q7Z3Y8 459 aa23.14■■□□□ 1.29
CDK4-204ENST00000547281 EP400Q96L91 3159 aa23.13■■□□□ 1.29
CDK4-204ENST00000547281 CHRNA2Q15822 529 aa23.13■■□□□ 1.29
CDK4-204ENST00000547281 ABCA3Q99758 1704 aa23.13■■□□□ 1.29
CDK4-204ENST00000547281 NWD2Q9ULI1 1742 aa23.13■■□□□ 1.29
CDK4-204ENST00000547281 ROCK2O75116 1388 aaKnown RBP23.13■■□□□ 1.29
CDK4-204ENST00000547281 PLCH1Q4KWH8 1693 aa23.13■■□□□ 1.29
CDK4-204ENST00000547281 PPIP5K1Q6PFW1 1433 aa23.12■■□□□ 1.29
CDK4-204ENST00000547281 CABP1Q9NZU7 370 aa23.12■■□□□ 1.29
CDK4-204ENST00000547281 EVC2Q86UK5 1308 aa23.11■■□□□ 1.29
CDK4-204ENST00000547281 SF3B2Q13435 895 aaKnown RBP23.11■■□□□ 1.29
CDK4-204ENST00000547281 KIAA0232Q92628 1395 aa23.11■■□□□ 1.29
CDK4-204ENST00000547281 STRN4Q9NRL3 753 aa23.1■■□□□ 1.29
CDK4-204ENST00000547281 EVA1CP58658 441 aa23.09■■□□□ 1.29
CDK4-204ENST00000547281 NLRP13Q86W25 1043 aa23.09■■□□□ 1.29
CDK4-204ENST00000547281 ZRANB1Q9UGI0 708 aa23.09■■□□□ 1.29
CDK4-204ENST00000547281 PCGF6Q9BYE7 350 aa23.08■■□□□ 1.29
CDK4-204ENST00000547281 COL14A1Q05707 1796 aaKnown RBP23.08■■□□□ 1.29
CDK4-204ENST00000547281 SPATA31A5Q5VU36 1347 aa23.08■■□□□ 1.28
CDK4-204ENST00000547281 SPATA31A7Q8IWB4 1347 aa23.08■■□□□ 1.28
CDK4-204ENST00000547281 BLMP54132 1417 aaPredicted RBP23.06■■□□□ 1.28
CDK4-204ENST00000547281 TOPAZ1Q8N9V7 1692 aa23.04■■□□□ 1.28
CDK4-204ENST00000547281 NLRP6P59044 892 aa23.04■■□□□ 1.28
CDK4-204ENST00000547281 QRICH2Q9H0J4 1663 aa23.03■■□□□ 1.28
CDK4-204ENST00000547281 GCP02774 474 aa23.03■■□□□ 1.28
CDK4-204ENST00000547281 USP35Q9P2H5 1018 aa23.03■■□□□ 1.28
CDK4-204ENST00000547281 BRD4O60885 1362 aaPredicted RBP23.02■■□□□ 1.28
CDK4-204ENST00000547281 ZBTB7CA1YPR0 619 aa23.02■■□□□ 1.28
CDK4-204ENST00000547281 DEFB132Q7Z7B7 95 aa23.02■■□□□ 1.28
CDK4-204ENST00000547281 CARD11Q9BXL7 1154 aa23.02■■□□□ 1.28
CDK4-204ENST00000547281 TONSLQ96HA7 1378 aa23.01■■□□□ 1.27
CDK4-204ENST00000547281 BRWD3Q6RI45 1802 aa23.01■■□□□ 1.27
CDK4-204ENST00000547281 TRPM1Q7Z4N2 1603 aa23.01■■□□□ 1.27
CDK4-204ENST00000547281 SPATA31A1Q5TZJ5 1347 aa23.01■■□□□ 1.27
CDK4-204ENST00000547281 NRAPQ86VF7 1730 aa23■■□□□ 1.27
CDK4-204ENST00000547281 ZNF692Q9BU19 519 aaPredicted RBP23■■□□□ 1.27
CDK4-204ENST00000547281 USP19O94966 1318 aa23■■□□□ 1.27
CDK4-204ENST00000547281 CRYBG1Q9Y4K1 1723 aa22.99■■□□□ 1.27
CDK4-204ENST00000547281 FAM182BQ5T319 152 aa22.99■■□□□ 1.27
CDK4-204ENST00000547281 USP6P35125 1406 aa22.98■■□□□ 1.27
CDK4-204ENST00000547281 LARP1Q6PKG0 1096 aaKnown RBP22.97■■□□□ 1.27
CDK4-204ENST00000547281 CPDO75976 1380 aa22.97■■□□□ 1.27
CDK4-204ENST00000547281 BAG6P46379 1132 aa22.96■■□□□ 1.27
CDK4-204ENST00000547281 PHRF1Q9P1Y6 1649 aaKnown RBP22.96■■□□□ 1.27
CDK4-204ENST00000547281 SSH2Q76I76 1423 aa22.93■■□□□ 1.26
CDK4-204ENST00000547281 TTC21BQ7Z4L5 1316 aa22.93■■□□□ 1.26
CDK4-204ENST00000547281 TCP11L2Q8N4U5 519 aa22.93■■□□□ 1.26
CDK4-204ENST00000547281 PDE3BQ13370 1112 aa22.92■■□□□ 1.26
CDK4-204ENST00000547281 BARGINQ6ZT62 677 aa22.92■■□□□ 1.26
CDK4-204ENST00000547281 SRCAPQ6ZRS2 3230 aa22.91■■□□□ 1.26
CDK4-204ENST00000547281 CAMTA1Q9Y6Y1 1673 aa22.91■■□□□ 1.26
CDK4-204ENST00000547281 TMC1Q8TDI8 760 aa22.91■■□□□ 1.26
CDK4-204ENST00000547281 NRKQ7Z2Y5 1582 aa22.9■■□□□ 1.26
CDK4-204ENST00000547281 SOX12O15370 315 aa22.9■■□□□ 1.26
CDK4-204ENST00000547281 FAM196AQ6ZSG2 479 aa22.9■■□□□ 1.26
CDK4-204ENST00000547281 KTN1Q86UP2 1357 aaKnown RBP22.89■■□□□ 1.26
CDK4-204ENST00000547281 KCNH5Q8NCM2 988 aa22.89■■□□□ 1.25
CDK4-204ENST00000547281 THRAP3Q9Y2W1 955 aaKnown RBP22.89■■□□□ 1.25
CDK4-204ENST00000547281 TTC21AQ8NDW8 1320 aa22.88■■□□□ 1.25
CDK4-204ENST00000547281 EN1Q05925 392 aaPredicted RBP22.88■■□□□ 1.25
CDK4-204ENST00000547281 AATKQ6ZMQ8 1374 aa22.87■■□□□ 1.25
CDK4-204ENST00000547281 TRIM37O94972 964 aa22.86■■□□□ 1.25
CDK4-204ENST00000547281 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.86■■□□□ 1.25
CDK4-204ENST00000547281 SBNO2Q9Y2G9 1366 aa22.86■■□□□ 1.25
CDK4-204ENST00000547281 TOM1L2Q6ZVM7 507 aa22.85■■□□□ 1.25
CDK4-204ENST00000547281 HDGFL2Q7Z4V5 671 aaPredicted RBP22.85■■□□□ 1.25
CDK4-204ENST00000547281 THSD7AQ9UPZ6 1657 aa22.84■■□□□ 1.25
CDK4-204ENST00000547281 SLC12A5Q9H2X9 1139 aa22.84■■□□□ 1.25
CDK4-204ENST00000547281 CPSF1Q10570 1443 aaKnown RBP22.83■■□□□ 1.25
CDK4-204ENST00000547281 ARHGEF25Q86VW2 580 aa22.83■■□□□ 1.25
CDK4-204ENST00000547281 AXIN2Q9Y2T1 843 aa22.83■■□□□ 1.25
CDK4-204ENST00000547281 COL5A2P05997 1499 aaPredicted RBP22.83■■□□□ 1.25
CDK4-204ENST00000547281 SLIT3O75094 1523 aa22.82■■□□□ 1.24
CDK4-204ENST00000547281 CRB1P82279 1406 aa22.82■■□□□ 1.24
CDK4-204ENST00000547281 LMO7Q8WWI1 1683 aa22.81■■□□□ 1.24
CDK4-204ENST00000547281 APBA3O96018 575 aa22.81■■□□□ 1.24
CDK4-204ENST00000547281 CSB-PGBD3P0DP91 1061 aa22.81■■□□□ 1.24
CDK4-204ENST00000547281 TERF2IPQ9NYB0 399 aa22.81■■□□□ 1.24
CDK4-204ENST00000547281 ST20-MTHFSA0A0A6YYL1 179 aa22.8■■□□□ 1.24
CDK4-204ENST00000547281 PIK3C2AO00443 1686 aa22.79■■□□□ 1.24
CDK4-204ENST00000547281 PSDA5PKW4 1024 aaPredicted RBP22.79■■□□□ 1.24
CDK4-204ENST00000547281 SLC24A1O60721 1099 aa22.78■■□□□ 1.24
CDK4-204ENST00000547281 EZH2Q15910 746 aaKnown RBP22.78■■□□□ 1.24
CDK4-204ENST00000547281 NME9Q86XW9 330 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms