RNA–Protein interactions for RNA: ENST00000546893.5

SLC38A1-204, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 2,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-204ENST00000546893 ZKSCAN2Q63HK3 967 aa17.41■□□□□ 0.38
SLC38A1-204ENST00000546893 TERF2IPQ9NYB0 399 aa17.41■□□□□ 0.38
SLC38A1-204ENST00000546893 SIGLEC1Q9BZZ2 1709 aa17.4■□□□□ 0.38
SLC38A1-204ENST00000546893 PDIA4P13667 645 aaKnown RBP17.4■□□□□ 0.38
SLC38A1-204ENST00000546893 PANK1Q8TE04 598 aa17.4■□□□□ 0.38
SLC38A1-204ENST00000546893 MVPQ14764 893 aaKnown RBP17.39■□□□□ 0.37
SLC38A1-204ENST00000546893 U2AF1L5P0DN76 240 aaPredicted RBP17.38■□□□□ 0.37
SLC38A1-204ENST00000546893 U2AF1Q01081 240 aaKnown RBP eCLIP17.38■□□□□ 0.372e-6■□□□□ 9.2
SLC38A1-204ENST00000546893 L1TD1Q5T7N2 865 aaKnown RBP17.38■□□□□ 0.37
SLC38A1-204ENST00000546893 ZNF428Q96B54 188 aa17.38■□□□□ 0.37
SLC38A1-204ENST00000546893 PDCL3Q9H2J4 239 aa17.38■□□□□ 0.37
SLC38A1-204ENST00000546893 TMEM132EQ6IEE7 984 aa17.37■□□□□ 0.37
SLC38A1-204ENST00000546893 COL3A1P02461 1466 aaPredicted RBP17.37■□□□□ 0.37
SLC38A1-204ENST00000546893 USP19O94966 1318 aa17.37■□□□□ 0.37
SLC38A1-204ENST00000546893 CDC42BPGQ6DT37 1551 aa17.36■□□□□ 0.37
SLC38A1-204ENST00000546893 RAPGEF3O95398 923 aa17.36■□□□□ 0.37
SLC38A1-204ENST00000546893 DZIP1LQ8IYY4 767 aaKnown RBP17.36■□□□□ 0.37
SLC38A1-204ENST00000546893 CHMP4BQ9H444 224 aaKnown RBP17.36■□□□□ 0.37
SLC38A1-204ENST00000546893 RICTORQ6R327 1708 aa17.35■□□□□ 0.37
SLC38A1-204ENST00000546893 HDAC1Q13547 482 aaPredicted RBP17.35■□□□□ 0.37
SLC38A1-204ENST00000546893 DDX19BQ9UMR2 479 aa17.35■□□□□ 0.37
SLC38A1-204ENST00000546893 A0A1W2PP64 1363 aa17.35■□□□□ 0.37
SLC38A1-204ENST00000546893 PTPRMP28827 1452 aa17.35■□□□□ 0.37
SLC38A1-204ENST00000546893 TMEM131LA2VDJ0 1609 aa17.35■□□□□ 0.37
SLC38A1-204ENST00000546893 FTSJ3Q8IY81 847 aaKnown RBP17.35■□□□□ 0.37
SLC38A1-204ENST00000546893 PPP6R1Q9UPN7 881 aa17.35■□□□□ 0.37
SLC38A1-204ENST00000546893 NLRP1Q9C000 1473 aa17.34■□□□□ 0.37
SLC38A1-204ENST00000546893 NEUROD2Q15784 382 aa17.34■□□□□ 0.37
SLC38A1-204ENST00000546893 PREX1Q8TCU6 1659 aa17.34■□□□□ 0.37
SLC38A1-204ENST00000546893 PNPLA6Q8IY17 1366 aa17.33■□□□□ 0.37
SLC38A1-204ENST00000546893 IPO8O15397 1037 aaKnown RBP17.33■□□□□ 0.37
SLC38A1-204ENST00000546893 TNNT2P45379 298 aaPredicted RBP17.33■□□□□ 0.37
SLC38A1-204ENST00000546893 PLEKHF1Q96S99 279 aa17.33■□□□□ 0.37
SLC38A1-204ENST00000546893 DLC1Q96QB1 1528 aa17.33■□□□□ 0.36
SLC38A1-204ENST00000546893 KIF16BQ96L93 1317 aa17.33■□□□□ 0.36
SLC38A1-204ENST00000546893 RRP7AQ9Y3A4 280 aaKnown RBP17.33■□□□□ 0.36
SLC38A1-204ENST00000546893 TSPOAP1O95153 1857 aa17.33■□□□□ 0.36
SLC38A1-204ENST00000546893 HDGFL2Q7Z4V5 671 aaPredicted RBP17.32■□□□□ 0.36
SLC38A1-204ENST00000546893 TBC1D32Q96NH3 1257 aa17.32■□□□□ 0.36
SLC38A1-204ENST00000546893 PCDHB15Q9Y5E8 787 aa17.32■□□□□ 0.36
SLC38A1-204ENST00000546893 ALDH1L2Q3SY69 923 aa17.32■□□□□ 0.36
SLC38A1-204ENST00000546893 PDZRN3Q9UPQ7 1066 aa17.32■□□□□ 0.36
SLC38A1-204ENST00000546893 TMPOP42166 694 aaKnown RBP17.31■□□□□ 0.36
SLC38A1-204ENST00000546893 YTHDC2Q9H6S0 1430 aaKnown RBP17.31■□□□□ 0.36
SLC38A1-204ENST00000546893 KIF13AQ9H1H9 1805 aa17.31■□□□□ 0.36
SLC38A1-204ENST00000546893 BRPF1P55201 1214 aaPredicted RBP17.31■□□□□ 0.36
SLC38A1-204ENST00000546893 XRCC6P12956 609 aaKnown RBP eCLIP17.3■□□□□ 0.36
SLC38A1-204ENST00000546893 IDI1Q13907 227 aa17.3■□□□□ 0.36
SLC38A1-204ENST00000546893 CFAP65Q6ZU64 1925 aaKnown RBP17.3■□□□□ 0.36
SLC38A1-204ENST00000546893 RLBP1P12271 317 aa17.3■□□□□ 0.36
SLC38A1-204ENST00000546893 SRPK2P78362 688 aaKnown RBP17.3■□□□□ 0.36
SLC38A1-204ENST00000546893 CABP2Q9NPB3 220 aa17.3■□□□□ 0.36
SLC38A1-204ENST00000546893 PPIP5K1Q6PFW1 1433 aa17.3■□□□□ 0.36
SLC38A1-204ENST00000546893 REREQ9P2R6 1566 aa17.3■□□□□ 0.36
SLC38A1-204ENST00000546893 ATP7BP35670 1465 aa17.29■□□□□ 0.36
SLC38A1-204ENST00000546893 KIF20BQ96Q89 1820 aa17.29■□□□□ 0.36
SLC38A1-204ENST00000546893 ATF7IPQ6VMQ6 1270 aa17.29■□□□□ 0.36
SLC38A1-204ENST00000546893 SMC4Q9NTJ3 1288 aa17.29■□□□□ 0.36
SLC38A1-204ENST00000546893 FCHSD2O94868 740 aa17.28■□□□□ 0.36
SLC38A1-204ENST00000546893 DIAPH1O60610 1272 aaKnown RBP17.27■□□□□ 0.36
SLC38A1-204ENST00000546893 CD163L1Q9NR16 1453 aa17.27■□□□□ 0.36
SLC38A1-204ENST00000546893 TPM2P07951 284 aa17.26■□□□□ 0.35
SLC38A1-204ENST00000546893 PANK2Q9BZ23 570 aa17.26■□□□□ 0.35
SLC38A1-204ENST00000546893 ARHGEF40Q8TER5 1519 aa17.26■□□□□ 0.35
SLC38A1-204ENST00000546893 FYB1O15117 783 aa17.26■□□□□ 0.35
SLC38A1-204ENST00000546893 TRIM35Q9UPQ4 493 aa17.26■□□□□ 0.35
SLC38A1-204ENST00000546893 ALKQ9UM73 1620 aa17.25■□□□□ 0.35
SLC38A1-204ENST00000546893 SMC5Q8IY18 1101 aa17.25■□□□□ 0.35
SLC38A1-204ENST00000546893 AGLP35573 1532 aa17.24■□□□□ 0.35
SLC38A1-204ENST00000546893 U2SURPO15042 1029 aaKnown RBP17.24■□□□□ 0.35
SLC38A1-204ENST00000546893 EXOSC9Q06265 439 aaKnown RBP17.24■□□□□ 0.35
SLC38A1-204ENST00000546893 FSD2A1L4K1 749 aa17.23■□□□□ 0.35
SLC38A1-204ENST00000546893 TRIM27P14373 513 aa17.23■□□□□ 0.35
SLC38A1-204ENST00000546893 ARHGAP45Q92619 1136 aa17.23■□□□□ 0.35
SLC38A1-204ENST00000546893 ARXQ96QS3 562 aa17.22■□□□□ 0.35
SLC38A1-204ENST00000546893 SEC24BO95487 1268 aa17.22■□□□□ 0.35
SLC38A1-204ENST00000546893 ANTXR1Q9H6X2 564 aa17.22■□□□□ 0.35
SLC38A1-204ENST00000546893 ERBB4Q15303 1308 aa17.22■□□□□ 0.35
SLC38A1-204ENST00000546893 RIPK4P57078 832 aa17.21■□□□□ 0.35
SLC38A1-204ENST00000546893 SSH1Q8WYL5 1049 aa17.21■□□□□ 0.35
SLC38A1-204ENST00000546893 PRAM1Q96QH2 718 aa17.21■□□□□ 0.35
SLC38A1-204ENST00000546893 BCL2L13Q9BXK5 485 aa17.21■□□□□ 0.35
SLC38A1-204ENST00000546893 FAM135BQ49AJ0 1406 aa17.21■□□□□ 0.35
SLC38A1-204ENST00000546893 YEATS2Q9ULM3 1422 aa17.21■□□□□ 0.35
SLC38A1-204ENST00000546893 CFAP44Q96MT7 982 aa17.21■□□□□ 0.35
SLC38A1-204ENST00000546893 GGNBP2Q9H3C7 697 aa17.21■□□□□ 0.35
SLC38A1-204ENST00000546893 MYO5BQ9ULV0 1848 aa17.21■□□□□ 0.34
SLC38A1-204ENST00000546893 DNAJC5Q9H3Z4 198 aa17.2■□□□□ 0.34
SLC38A1-204ENST00000546893 ZBTB40Q9NUA8 1239 aa17.2■□□□□ 0.34
SLC38A1-204ENST00000546893 ITPRIPQ8IWB1 547 aa17.2■□□□□ 0.34
SLC38A1-204ENST00000546893 LMOD3Q0VAK6 560 aa17.19■□□□□ 0.34
SLC38A1-204ENST00000546893 PIK3R4Q99570 1358 aa17.19■□□□□ 0.34
SLC38A1-204ENST00000546893 GOLGA6L3A6NEY3 463 aa17.19■□□□□ 0.34
SLC38A1-204ENST00000546893 ESPNB1AK53 854 aa17.19■□□□□ 0.34
SLC38A1-204ENST00000546893 GTF2E1P29083 439 aaPredicted RBP17.19■□□□□ 0.34
SLC38A1-204ENST00000546893 BBXQ8WY36 941 aaPredicted RBP17.19■□□□□ 0.34
SLC38A1-204ENST00000546893 AATKQ6ZMQ8 1374 aa17.18■□□□□ 0.34
SLC38A1-204ENST00000546893 TSR2Q969E8 191 aaKnown RBP17.18■□□□□ 0.34
SLC38A1-204ENST00000546893 CDK19Q9BWU1 502 aa17.18■□□□□ 0.34
SLC38A1-204ENST00000546893 TBC1D2Q9BYX2 928 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms