RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 CABP2Q9NPB3 220 aa33.06■■■□□ 2.88
CHFR-222ENST00000544093 SBNO2Q9Y2G9 1366 aa33.06■■■□□ 2.88
CHFR-222ENST00000544093 BCL9LQ86UU0 1499 aa33.05■■■□□ 2.88
CHFR-222ENST00000544093 CABLES1Q8TDN4 633 aa33.04■■■□□ 2.88
CHFR-222ENST00000544093 PCGF6Q9BYE7 350 aa33.04■■■□□ 2.88
CHFR-222ENST00000544093 ATRNO75882 1429 aa33.03■■■□□ 2.88
CHFR-222ENST00000544093 SLIT2O94813 1529 aa33.02■■■□□ 2.88
CHFR-222ENST00000544093 BRD4O60885 1362 aaPredicted RBP33.02■■■□□ 2.88
CHFR-222ENST00000544093 NWD2Q9ULI1 1742 aa33■■■□□ 2.87
CHFR-222ENST00000544093 TIMELESSQ9UNS1 1208 aa33■■■□□ 2.87
CHFR-222ENST00000544093 UNC5CLQ8IV45 518 aa32.98■■■□□ 2.87
CHFR-222ENST00000544093 CRYBG1Q9Y4K1 1723 aa32.98■■■□□ 2.87
CHFR-222ENST00000544093 PLEKHG5O94827 1062 aa32.97■■■□□ 2.87
CHFR-222ENST00000544093 PLCH1Q4KWH8 1693 aa32.97■■■□□ 2.87
CHFR-222ENST00000544093 ATAD2Q6PL18 1390 aa32.96■■■□□ 2.87
CHFR-222ENST00000544093 CABP1Q9NZU7 370 aa32.95■■■□□ 2.87
CHFR-222ENST00000544093 RGS12O14924 1447 aa32.94■■■□□ 2.86
CHFR-222ENST00000544093 COL14A1Q05707 1796 aaKnown RBP32.92■■■□□ 2.86
CHFR-222ENST00000544093 GJD4Q96KN9 370 aaPredicted RBP32.91■■■□□ 2.86
CHFR-222ENST00000544093 SLC24A1O60721 1099 aa32.9■■■□□ 2.86
CHFR-222ENST00000544093 ABTB2Q8N961 1025 aa32.9■■■□□ 2.86
CHFR-222ENST00000544093 USP6P35125 1406 aa32.9■■■□□ 2.86
CHFR-222ENST00000544093 PHRF1Q9P1Y6 1649 aaKnown RBP32.9■■■□□ 2.86
CHFR-222ENST00000544093 FAM83GA6ND36 823 aa32.89■■■□□ 2.86
CHFR-222ENST00000544093 ZNF692Q9BU19 519 aaPredicted RBP32.88■■■□□ 2.85
CHFR-222ENST00000544093 VPS72Q15906 364 aa32.85■■■□□ 2.85
CHFR-222ENST00000544093 NLRP13Q86W25 1043 aa32.85■■■□□ 2.85
CHFR-222ENST00000544093 AKAP12Q02952 1782 aa32.84■■■□□ 2.85
CHFR-222ENST00000544093 PRDM11Q9NQV5 511 aa32.84■■■□□ 2.85
CHFR-222ENST00000544093 PUS7Q96PZ0 661 aaKnown RBP32.83■■■□□ 2.85
CHFR-222ENST00000544093 NRAPQ86VF7 1730 aa32.82■■■□□ 2.85
CHFR-222ENST00000544093 USP19O94966 1318 aa32.81■■■□□ 2.84
CHFR-222ENST00000544093 GLI3P10071 1580 aa32.81■■■□□ 2.84
CHFR-222ENST00000544093 NUTM2GQ5VZR2 741 aa32.81■■■□□ 2.84
CHFR-222ENST00000544093 BTG4Q9NY30 223 aa32.81■■■□□ 2.84
CHFR-222ENST00000544093 SSH2Q76I76 1423 aa32.8■■■□□ 2.84
CHFR-222ENST00000544093 KIAA0232Q92628 1395 aa32.79■■■□□ 2.84
CHFR-222ENST00000544093 NRKQ7Z2Y5 1582 aa32.79■■■□□ 2.84
CHFR-222ENST00000544093 CPSF1Q10570 1443 aaKnown RBP32.78■■■□□ 2.84
CHFR-222ENST00000544093 ST20-MTHFSA0A0A6YYL1 179 aa32.77■■■□□ 2.84
CHFR-222ENST00000544093 CCER1Q8TC90 406 aaPredicted RBP32.77■■■□□ 2.84
CHFR-222ENST00000544093 CPDO75976 1380 aa32.76■■■□□ 2.83
CHFR-222ENST00000544093 UPF1Q92900 1129 aaKnown RBP eCLIP32.76■■■□□ 2.83
CHFR-222ENST00000544093 CCDC9Q9Y3X0 531 aaKnown RBP32.76■■■□□ 2.83
CHFR-222ENST00000544093 TTC21AQ8NDW8 1320 aa32.76■■■□□ 2.83
CHFR-222ENST00000544093 KTN1Q86UP2 1357 aaKnown RBP32.74■■■□□ 2.83
CHFR-222ENST00000544093 TESK2Q96S53 571 aa32.74■■■□□ 2.83
CHFR-222ENST00000544093 MON2Q7Z3U7 1717 aa32.74■■■□□ 2.83
CHFR-222ENST00000544093 USP47Q96K76 1375 aa32.73■■■□□ 2.83
CHFR-222ENST00000544093 PIK3C2AO00443 1686 aa32.73■■■□□ 2.83
CHFR-222ENST00000544093 NLRP6P59044 892 aa32.73■■■□□ 2.83
CHFR-222ENST00000544093 ZC3H6P61129 1189 aaKnown RBP32.73■■■□□ 2.83
CHFR-222ENST00000544093 NINLQ9Y2I6 1382 aa32.72■■■□□ 2.83
CHFR-222ENST00000544093 GCP02774 474 aa32.72■■■□□ 2.83
CHFR-222ENST00000544093 TTC21BQ7Z4L5 1316 aa32.72■■■□□ 2.83
CHFR-222ENST00000544093 ONECUT3O60422 494 aaPredicted RBP32.7■■■□□ 2.83
CHFR-222ENST00000544093 TMC1Q8TDI8 760 aa32.7■■■□□ 2.83
CHFR-222ENST00000544093 SLIT3O75094 1523 aa32.7■■■□□ 2.83
CHFR-222ENST00000544093 HDGFL2Q7Z4V5 671 aaPredicted RBP32.68■■■□□ 2.82
CHFR-222ENST00000544093 TERF2IPQ9NYB0 399 aa32.68■■■□□ 2.82
CHFR-222ENST00000544093 CHRNA2Q15822 529 aa32.67■■■□□ 2.82
CHFR-222ENST00000544093 CD163L1Q9NR16 1453 aa32.66■■■□□ 2.82
CHFR-222ENST00000544093 TMF1P82094 1093 aa32.65■■■□□ 2.82
CHFR-222ENST00000544093 SPATA31A5Q5VU36 1347 aa32.65■■■□□ 2.82
CHFR-222ENST00000544093 SPATA31A7Q8IWB4 1347 aa32.65■■■□□ 2.82
CHFR-222ENST00000544093 SEPT12Q8IYM1 358 aa32.64■■■□□ 2.82
CHFR-222ENST00000544093 KCNH5Q8NCM2 988 aa32.64■■■□□ 2.82
CHFR-222ENST00000544093 LMO7Q8WWI1 1683 aa32.64■■■□□ 2.82
CHFR-222ENST00000544093 SLC12A5Q9H2X9 1139 aa32.63■■■□□ 2.81
CHFR-222ENST00000544093 EP400Q96L91 3159 aa32.62■■■□□ 2.81
CHFR-222ENST00000544093 BRWD3Q6RI45 1802 aa32.61■■■□□ 2.81
CHFR-222ENST00000544093 EVA1CP58658 441 aa32.61■■■□□ 2.81
CHFR-222ENST00000544093 CDCA8Q53HL2 280 aa32.61■■■□□ 2.81
CHFR-222ENST00000544093 EDC4Q6P2E9 1401 aaKnown RBP32.6■■■□□ 2.81
CHFR-222ENST00000544093 CAMTA1Q9Y6Y1 1673 aa32.59■■■□□ 2.81
CHFR-222ENST00000544093 STRN4Q9NRL3 753 aa32.59■■■□□ 2.81
CHFR-222ENST00000544093 USP54Q70EL1 1684 aa32.59■■■□□ 2.81
CHFR-222ENST00000544093 AATKQ6ZMQ8 1374 aa32.58■■■□□ 2.81
CHFR-222ENST00000544093 A0A1W2PP64 1363 aa32.58■■■□□ 2.81
CHFR-222ENST00000544093 USP31Q70CQ4 1352 aa32.58■■■□□ 2.81
CHFR-222ENST00000544093 SPATA31A1Q5TZJ5 1347 aa32.57■■■□□ 2.8
CHFR-222ENST00000544093 FAM98CQ17RN3 349 aaKnown RBP32.57■■■□□ 2.8
CHFR-222ENST00000544093 CCDC125Q86Z20 511 aa32.57■■■□□ 2.8
CHFR-222ENST00000544093 A0A0G2JS52 829 aa32.56■■■□□ 2.8
CHFR-222ENST00000544093 MYT1Q01538 1121 aa32.56■■■□□ 2.8
CHFR-222ENST00000544093 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.55■■■□□ 2.8
CHFR-222ENST00000544093 KRT27Q7Z3Y8 459 aa32.54■■■□□ 2.8
CHFR-222ENST00000544093 COL5A2P05997 1499 aaPredicted RBP32.53■■■□□ 2.8
CHFR-222ENST00000544093 THSD7AQ9UPZ6 1657 aa32.53■■■□□ 2.8
CHFR-222ENST00000544093 ANKRD36BQ8N2N9 1353 aa32.5■■■□□ 2.79
CHFR-222ENST00000544093 ARHGEF25Q86VW2 580 aa32.5■■■□□ 2.79
CHFR-222ENST00000544093 NFAT5O94916 1531 aa32.5■■■□□ 2.79
CHFR-222ENST00000544093 ABCC6O95255 1503 aa32.5■■■□□ 2.79
CHFR-222ENST00000544093 COL18A1P39060 1754 aa32.5■■■□□ 2.79
CHFR-222ENST00000544093 ZBTB7CA1YPR0 619 aa32.49■■■□□ 2.79
CHFR-222ENST00000544093 LARP1Q6PKG0 1096 aaKnown RBP32.48■■■□□ 2.79
CHFR-222ENST00000544093 BARGINQ6ZT62 677 aa32.48■■■□□ 2.79
CHFR-222ENST00000544093 NME9Q86XW9 330 aa32.48■■■□□ 2.79
CHFR-222ENST00000544093 THRAP3Q9Y2W1 955 aaKnown RBP32.48■■■□□ 2.79
CHFR-222ENST00000544093 CRB1P82279 1406 aa32.46■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms