RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 POLR3GLQ9BT43 218 aa15.5■□□□□ 0.07
DDB1-222ENST00000543627 USP47Q96K76 1375 aa15.49■□□□□ 0.07
DDB1-222ENST00000543627 CCDC9Q9Y3X0 531 aaKnown RBP15.49■□□□□ 0.07
DDB1-222ENST00000543627 ZC3H6P61129 1189 aaKnown RBP15.48■□□□□ 0.07
DDB1-222ENST00000543627 TMF1P82094 1093 aa15.48■□□□□ 0.07
DDB1-222ENST00000543627 SLC12A5Q9H2X9 1139 aa15.48■□□□□ 0.07
DDB1-222ENST00000543627 POLR3AO14802 1390 aaPredicted RBP15.48■□□□□ 0.07
DDB1-222ENST00000543627 ATAD2Q6PL18 1390 aa15.48■□□□□ 0.07
DDB1-222ENST00000543627 COL22A1Q8NFW1 1626 aaPredicted RBP15.47■□□□□ 0.07
DDB1-222ENST00000543627 NLRP6P59044 892 aa15.47■□□□□ 0.07
DDB1-222ENST00000543627 SOX12O15370 315 aa15.46■□□□□ 0.07
DDB1-222ENST00000543627 HDGFL2Q7Z4V5 671 aaPredicted RBP15.46■□□□□ 0.07
DDB1-222ENST00000543627 NLRP13Q86W25 1043 aa15.46■□□□□ 0.07
DDB1-222ENST00000543627 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.46■□□□□ 0.07
DDB1-222ENST00000543627 TESK2Q96S53 571 aa15.46■□□□□ 0.07
DDB1-222ENST00000543627 ZNF692Q9BU19 519 aaPredicted RBP15.46■□□□□ 0.07
DDB1-222ENST00000543627 TRPC5Q9UL62 973 aaPredicted RBP15.46■□□□□ 0.07
DDB1-222ENST00000543627 TOPAZ1Q8N9V7 1692 aa15.45■□□□□ 0.06
DDB1-222ENST00000543627 FAM83GA6ND36 823 aa15.45■□□□□ 0.06
DDB1-222ENST00000543627 CHRNA2Q15822 529 aa15.45■□□□□ 0.06
DDB1-222ENST00000543627 FNBP4Q8N3X1 1017 aaPredicted RBP15.45■□□□□ 0.06
DDB1-222ENST00000543627 TRPM3Q9HCF6 1732 aaPredicted RBP15.45■□□□□ 0.06
DDB1-222ENST00000543627 SLC24A1O60721 1099 aa15.44■□□□□ 0.06
DDB1-222ENST00000543627 RBM6P78332 1123 aaKnown RBP15.44■□□□□ 0.06
DDB1-222ENST00000543627 PRDM11Q9NQV5 511 aa15.44■□□□□ 0.06
DDB1-222ENST00000543627 KTN1Q86UP2 1357 aaKnown RBP15.44■□□□□ 0.06
DDB1-222ENST00000543627 SBNO2Q9Y2G9 1366 aa15.44■□□□□ 0.06
DDB1-222ENST00000543627 UNC5CLQ8IV45 518 aa15.43■□□□□ 0.06
DDB1-222ENST00000543627 BTG4Q9NY30 223 aa15.43■□□□□ 0.06
DDB1-222ENST00000543627 USP6P35125 1406 aa15.43■□□□□ 0.06
DDB1-222ENST00000543627 TTC21BQ7Z4L5 1316 aa15.43■□□□□ 0.06
DDB1-222ENST00000543627 EIF4G2P78344 907 aaKnown RBP eCLIP15.42■□□□□ 0.06
DDB1-222ENST00000543627 TERF2IPQ9NYB0 399 aa15.42■□□□□ 0.06
DDB1-222ENST00000543627 A0A0G2JS52 829 aa15.41■□□□□ 0.06
DDB1-222ENST00000543627 HSPA5P11021 654 aaKnown RBP15.41■□□□□ 0.06
DDB1-222ENST00000543627 MYT1Q01538 1121 aa15.41■□□□□ 0.06
DDB1-222ENST00000543627 STRN4Q9NRL3 753 aa15.41■□□□□ 0.06
DDB1-222ENST00000543627 ALS2Q96Q42 1657 aa15.41■□□□□ 0.06
DDB1-222ENST00000543627 EVA1CP58658 441 aa15.4■□□□□ 0.06
DDB1-222ENST00000543627 CDCA8Q53HL2 280 aa15.4■□□□□ 0.06
DDB1-222ENST00000543627 ZRANB1Q9UGI0 708 aa15.4■□□□□ 0.06
DDB1-222ENST00000543627 KIAA0232Q92628 1395 aa15.39■□□□□ 0.05
DDB1-222ENST00000543627 GCP02774 474 aa15.39■□□□□ 0.05
DDB1-222ENST00000543627 GJD4Q96KN9 370 aaPredicted RBP15.39■□□□□ 0.05
DDB1-222ENST00000543627 MARF1Q9Y4F3 1742 aaKnown RBP15.39■□□□□ 0.05
DDB1-222ENST00000543627 NME9Q86XW9 330 aa15.38■□□□□ 0.05
DDB1-222ENST00000543627 BCL9LQ86UU0 1499 aa15.38■□□□□ 0.05
DDB1-222ENST00000543627 PUS7Q96PZ0 661 aaKnown RBP15.37■□□□□ 0.05
DDB1-222ENST00000543627 BRD4O60885 1362 aaPredicted RBP15.36■□□□□ 0.05
DDB1-222ENST00000543627 USP35Q9P2H5 1018 aa15.36■□□□□ 0.05
DDB1-222ENST00000543627 TTC21AQ8NDW8 1320 aa15.36■□□□□ 0.05
DDB1-222ENST00000543627 ATRNO75882 1429 aa15.35■□□□□ 0.05
DDB1-222ENST00000543627 CPSF1Q10570 1443 aaKnown RBP15.35■□□□□ 0.05
DDB1-222ENST00000543627 ABCA3Q99758 1704 aa15.35■□□□□ 0.05
DDB1-222ENST00000543627 SLIT2O94813 1529 aa15.35■□□□□ 0.05
DDB1-222ENST00000543627 A0A1W2PP64 1363 aa15.35■□□□□ 0.05
DDB1-222ENST00000543627 VPS72Q15906 364 aa15.34■□□□□ 0.05
DDB1-222ENST00000543627 FAM98CQ17RN3 349 aaKnown RBP15.33■□□□□ 0.04
DDB1-222ENST00000543627 KCNH5Q8NCM2 988 aa15.33■□□□□ 0.04
DDB1-222ENST00000543627 USP19O94966 1318 aa15.33■□□□□ 0.04
DDB1-222ENST00000543627 AKAP12Q02952 1782 aa15.33■□□□□ 0.04
DDB1-222ENST00000543627 SSH2Q76I76 1423 aa15.33■□□□□ 0.04
DDB1-222ENST00000543627 RGS12O14924 1447 aa15.32■□□□□ 0.04
DDB1-222ENST00000543627 CD163L1Q9NR16 1453 aa15.32■□□□□ 0.04
DDB1-222ENST00000543627 PHRF1Q9P1Y6 1649 aaKnown RBP15.32■□□□□ 0.04
DDB1-222ENST00000543627 PLCH1Q4KWH8 1693 aa15.32■□□□□ 0.04
DDB1-222ENST00000543627 NINLQ9Y2I6 1382 aa15.31■□□□□ 0.04
DDB1-222ENST00000543627 COL14A1Q05707 1796 aaKnown RBP15.31■□□□□ 0.04
DDB1-222ENST00000543627 CSB-PGBD3P0DP91 1061 aa15.3■□□□□ 0.04
DDB1-222ENST00000543627 EDC4Q6P2E9 1401 aaKnown RBP15.3■□□□□ 0.04
DDB1-222ENST00000543627 SEPT12Q8IYM1 358 aa15.3■□□□□ 0.04
DDB1-222ENST00000543627 COG3Q96JB2 828 aa15.3■□□□□ 0.04
DDB1-222ENST00000543627 GGNBP2Q9H3C7 697 aa15.3■□□□□ 0.04
DDB1-222ENST00000543627 PIK3C2AO00443 1686 aa15.29■□□□□ 0.04
DDB1-222ENST00000543627 LARP1Q6PKG0 1096 aaKnown RBP15.29■□□□□ 0.04
DDB1-222ENST00000543627 CRYBG1Q9Y4K1 1723 aa15.29■□□□□ 0.04
DDB1-222ENST00000543627 ANKRD36BQ8N2N9 1353 aa15.28■□□□□ 0.04
DDB1-222ENST00000543627 MON2Q7Z3U7 1717 aa15.28■□□□□ 0.04
DDB1-222ENST00000543627 NRKQ7Z2Y5 1582 aa15.28■□□□□ 0.04
DDB1-222ENST00000543627 SPATA31A5Q5VU36 1347 aa15.27■□□□□ 0.04
DDB1-222ENST00000543627 SPATA31A7Q8IWB4 1347 aa15.27■□□□□ 0.04
DDB1-222ENST00000543627 FBLN1P23142 703 aa15.27■□□□□ 0.04
DDB1-222ENST00000543627 TOM1L2Q6ZVM7 507 aa15.27■□□□□ 0.04
DDB1-222ENST00000543627 ARHGEF25Q86VW2 580 aa15.27■□□□□ 0.04
DDB1-222ENST00000543627 AXIN2Q9Y2T1 843 aa15.27■□□□□ 0.04
DDB1-222ENST00000543627 CDK12Q9NYV4 1490 aaPredicted RBP15.27■□□□□ 0.03
DDB1-222ENST00000543627 NWD2Q9ULI1 1742 aa15.26■□□□□ 0.03
DDB1-222ENST00000543627 CPDO75976 1380 aa15.26■□□□□ 0.03
DDB1-222ENST00000543627 C11orf95C9JLR9 678 aaPredicted RBP15.26■□□□□ 0.03
DDB1-222ENST00000543627 GLI3P10071 1580 aa15.25■□□□□ 0.03
DDB1-222ENST00000543627 UPF1Q92900 1129 aaKnown RBP eCLIP15.25■□□□□ 0.03
DDB1-222ENST00000543627 LTV1Q96GA3 475 aaPredicted RBP15.25■□□□□ 0.03
DDB1-222ENST00000543627 CARD14Q9BXL6 1004 aa15.25■□□□□ 0.03
DDB1-222ENST00000543627 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.25■□□□□ 0.03
DDB1-222ENST00000543627 CAMTA1Q9Y6Y1 1673 aa15.25■□□□□ 0.03
DDB1-222ENST00000543627 USP31Q70CQ4 1352 aa15.24■□□□□ 0.03
DDB1-222ENST00000543627 SPATA31A1Q5TZJ5 1347 aa15.24■□□□□ 0.03
DDB1-222ENST00000543627 FYB1O15117 783 aa15.24■□□□□ 0.03
DDB1-222ENST00000543627 FAM182BQ5T319 152 aa15.24■□□□□ 0.03
DDB1-222ENST00000543627 KRT27Q7Z3Y8 459 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms