RNA–Protein interactions for RNA: ENST00000543566.5

ARL6IP4-220, Transcript of ADP ribosylation factor like GTPase 6 interacting protein 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARL6IP4, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARL6IP4-220ENST00000543566 USP6P35125 1406 aa28.11■■■□□ 2.09
ARL6IP4-220ENST00000543566 SSH2Q76I76 1423 aa28.11■■■□□ 2.09
ARL6IP4-220ENST00000543566 GGNBP2Q9H3C7 697 aa28.11■■■□□ 2.09
ARL6IP4-220ENST00000543566 INSRP06213 1382 aa28.1■■■□□ 2.09
ARL6IP4-220ENST00000543566 ATF3P18847 181 aa28.1■■■□□ 2.09
ARL6IP4-220ENST00000543566 CADPS2Q86UW7 1296 aa28.1■■■□□ 2.09
ARL6IP4-220ENST00000543566 PMFBP1Q8TBY8 1022 aa28.09■■■□□ 2.09
ARL6IP4-220ENST00000543566 PHF8Q9UPP1 1060 aa28.08■■■□□ 2.09
ARL6IP4-220ENST00000543566 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.07■■■□□ 2.08
ARL6IP4-220ENST00000543566 TNNT2P45379 298 aaPredicted RBP28.06■■■□□ 2.08
ARL6IP4-220ENST00000543566 NGDNQ8NEJ9 315 aaKnown RBP28.05■■■□□ 2.08
ARL6IP4-220ENST00000543566 ESCO1Q5FWF5 840 aa28.04■■■□□ 2.08
ARL6IP4-220ENST00000543566 KIF1AQ12756 1690 aa28.04■■■□□ 2.08
ARL6IP4-220ENST00000543566 TTC21BQ7Z4L5 1316 aa28.03■■■□□ 2.08
ARL6IP4-220ENST00000543566 ORAI2Q96SN7 254 aa28.03■■■□□ 2.08
ARL6IP4-220ENST00000543566 BLMP54132 1417 aaPredicted RBP28.02■■■□□ 2.08
ARL6IP4-220ENST00000543566 ZBED9Q6R2W3 1325 aa28.02■■■□□ 2.08
ARL6IP4-220ENST00000543566 WDR43Q15061 677 aaKnown RBP eCLIP28.01■■■□□ 2.07
ARL6IP4-220ENST00000543566 TTC21AQ8NDW8 1320 aa28■■■□□ 2.07
ARL6IP4-220ENST00000543566 SCAF1Q9H7N4 1312 aaKnown RBP28■■■□□ 2.07
ARL6IP4-220ENST00000543566 SHPRHQ149N8 1683 aa27.99■■■□□ 2.07
ARL6IP4-220ENST00000543566 NME9Q86XW9 330 aa27.99■■■□□ 2.07
ARL6IP4-220ENST00000543566 MTHFSP49914 203 aa27.98■■■□□ 2.07
ARL6IP4-220ENST00000543566 CFAP53Q96M91 514 aa27.98■■■□□ 2.07
ARL6IP4-220ENST00000543566 COG3Q96JB2 828 aa27.95■■■□□ 2.07
ARL6IP4-220ENST00000543566 OVOS2A0A0J9YW53 1432 aa27.94■■■□□ 2.06
ARL6IP4-220ENST00000543566 OVOS2Q6IE36 1432 aa27.94■■■□□ 2.06
ARL6IP4-220ENST00000543566 ADAMTS8Q9UP79 889 aa27.94■■■□□ 2.06
ARL6IP4-220ENST00000543566 USP31Q70CQ4 1352 aa27.92■■■□□ 2.06
ARL6IP4-220ENST00000543566 AATKQ6ZMQ8 1374 aa27.92■■■□□ 2.06
ARL6IP4-220ENST00000543566 PIK3C2AO00443 1686 aa27.91■■■□□ 2.06
ARL6IP4-220ENST00000543566 SLAIN2Q9P270 581 aa27.91■■■□□ 2.06
ARL6IP4-220ENST00000543566 MAP2P11137 1827 aaKnown RBP27.91■■■□□ 2.06
ARL6IP4-220ENST00000543566 USP54Q70EL1 1684 aa27.91■■■□□ 2.06
ARL6IP4-220ENST00000543566 FOXO3O43524 673 aa27.9■■■□□ 2.06
ARL6IP4-220ENST00000543566 ZRANB1Q9UGI0 708 aa27.9■■■□□ 2.06
ARL6IP4-220ENST00000543566 COL3A1P02461 1466 aaPredicted RBP27.9■■■□□ 2.06
ARL6IP4-220ENST00000543566 PSME1Q06323 249 aa27.9■■■□□ 2.06
ARL6IP4-220ENST00000543566 SMG6Q86US8 1419 aaKnown RBP27.89■■■□□ 2.06
ARL6IP4-220ENST00000543566 TRPM3Q9HCF6 1732 aaPredicted RBP27.89■■■□□ 2.06
ARL6IP4-220ENST00000543566 BRINP3Q76B58 766 aa27.88■■■□□ 2.05
ARL6IP4-220ENST00000543566 PNPLA6Q8IY17 1366 aa27.86■■■□□ 2.05
ARL6IP4-220ENST00000543566 CDK12Q9NYV4 1490 aaPredicted RBP27.84■■■□□ 2.05
ARL6IP4-220ENST00000543566 MARF1Q9Y4F3 1742 aaKnown RBP27.84■■■□□ 2.05
ARL6IP4-220ENST00000543566 NPHP3Q7Z494 1330 aa27.84■■■□□ 2.05
ARL6IP4-220ENST00000543566 KRT28Q7Z3Y7 464 aa27.84■■■□□ 2.05
ARL6IP4-220ENST00000543566 POLKQ9UBT6 870 aa27.84■■■□□ 2.05
ARL6IP4-220ENST00000543566 PXDNQ92626 1479 aa27.83■■■□□ 2.05
ARL6IP4-220ENST00000543566 SBNO1A3KN83 1393 aa27.81■■■□□ 2.04
ARL6IP4-220ENST00000543566 ABTB2Q8N961 1025 aa27.8■■■□□ 2.04
ARL6IP4-220ENST00000543566 PAK3O75914 559 aaPredicted RBP27.79■■■□□ 2.04
ARL6IP4-220ENST00000543566 XPCQ01831 940 aaPredicted RBP27.79■■■□□ 2.04
ARL6IP4-220ENST00000543566 NUDCQ9Y266 331 aa27.79■■■□□ 2.04
ARL6IP4-220ENST00000543566 ALS2Q96Q42 1657 aa27.79■■■□□ 2.04
ARL6IP4-220ENST00000543566 IQSEC2Q5JU85 1478 aa27.78■■■□□ 2.04
ARL6IP4-220ENST00000543566 NLRP6P59044 892 aa27.77■■■□□ 2.04
ARL6IP4-220ENST00000543566 DDX17Q92841 729 aaKnown RBP27.77■■■□□ 2.04
ARL6IP4-220ENST00000543566 NHSL1Q5SYE7 1610 aa27.77■■■□□ 2.04
ARL6IP4-220ENST00000543566 FBLN1P23142 703 aa27.77■■■□□ 2.04
ARL6IP4-220ENST00000543566 EMILIN1Q9Y6C2 1016 aa27.77■■■□□ 2.04
ARL6IP4-220ENST00000543566 DIAPH1O60610 1272 aaKnown RBP27.76■■■□□ 2.03
ARL6IP4-220ENST00000543566 SOS2Q07890 1332 aaPredicted RBP27.75■■■□□ 2.03
ARL6IP4-220ENST00000543566 SENP3-EIF4A1A0A087X0R7 540 aa27.75■■■□□ 2.03
ARL6IP4-220ENST00000543566 PPM1GO15355 546 aaPredicted RBP27.74■■■□□ 2.03
ARL6IP4-220ENST00000543566 CCDC146Q8IYE0 955 aa27.74■■■□□ 2.03
ARL6IP4-220ENST00000543566 TNS3Q68CZ2 1445 aa27.73■■■□□ 2.03
ARL6IP4-220ENST00000543566 U2AF1L5P0DN76 240 aaPredicted RBP27.73■■■□□ 2.03
ARL6IP4-220ENST00000543566 U2AF1Q01081 240 aaKnown RBP eCLIP27.73■■■□□ 2.03
ARL6IP4-220ENST00000543566 RRS1Q15050 365 aaKnown RBP27.73■■■□□ 2.03
ARL6IP4-220ENST00000543566 SLIT3O75094 1523 aa27.72■■■□□ 2.03
ARL6IP4-220ENST00000543566 PDE3BQ13370 1112 aa27.71■■■□□ 2.03
ARL6IP4-220ENST00000543566 NUTM2GQ5VZR2 741 aa27.71■■■□□ 2.03
ARL6IP4-220ENST00000543566 PEAK1Q9H792 1746 aa27.71■■■□□ 2.03
ARL6IP4-220ENST00000543566 USP19O94966 1318 aa27.71■■■□□ 2.03
ARL6IP4-220ENST00000543566 SPATA31A3Q5VYP0 1347 aa27.71■■■□□ 2.03
ARL6IP4-220ENST00000543566 ROBO1Q9Y6N7 1651 aa27.7■■■□□ 2.03
ARL6IP4-220ENST00000543566 NGEFQ8N5V2 710 aa27.7■■■□□ 2.03
ARL6IP4-220ENST00000543566 RUNDC1Q96C34 613 aa27.7■■■□□ 2.03
ARL6IP4-220ENST00000543566 U2SURPO15042 1029 aaKnown RBP27.69■■■□□ 2.02
ARL6IP4-220ENST00000543566 SALL2Q9Y467 1007 aaPredicted RBP27.69■■■□□ 2.02
ARL6IP4-220ENST00000543566 NFAT5O94916 1531 aa27.69■■■□□ 2.02
ARL6IP4-220ENST00000543566 APAF1O14727 1248 aa27.68■■■□□ 2.02
ARL6IP4-220ENST00000543566 AHDC1Q5TGY3 1603 aaPredicted RBP27.67■■■□□ 2.02
ARL6IP4-220ENST00000543566 GTF3C3Q9Y5Q9 886 aa27.67■■■□□ 2.02
ARL6IP4-220ENST00000543566 MED1Q15648 1581 aaPredicted RBP27.65■■■□□ 2.02
ARL6IP4-220ENST00000543566 ARHGEF10O15013 1369 aa27.65■■■□□ 2.02
ARL6IP4-220ENST00000543566 KIF24Q5T7B8 1368 aa27.65■■■□□ 2.02
ARL6IP4-220ENST00000543566 TOM1O60784 492 aa27.65■■■□□ 2.02
ARL6IP4-220ENST00000543566 KCNH5Q8NCM2 988 aa27.65■■■□□ 2.02
ARL6IP4-220ENST00000543566 MAP3K19Q56UN5 1328 aa27.64■■■□□ 2.01
ARL6IP4-220ENST00000543566 SOX12O15370 315 aa27.64■■■□□ 2.01
ARL6IP4-220ENST00000543566 IL13P35225 146 aa27.64■■■□□ 2.01
ARL6IP4-220ENST00000543566 PNNQ9H307 717 aaKnown RBP27.64■■■□□ 2.01
ARL6IP4-220ENST00000543566 FLT4P35916 1363 aa27.63■■■□□ 2.01
ARL6IP4-220ENST00000543566 ZNF521Q96K83 1311 aa27.62■■■□□ 2.01
ARL6IP4-220ENST00000543566 CRYBG1Q9Y4K1 1723 aa27.62■■■□□ 2.01
ARL6IP4-220ENST00000543566 LMOD2Q6P5Q4 547 aa27.61■■■□□ 2.01
ARL6IP4-220ENST00000543566 CERKQ8TCT0 537 aa27.61■■■□□ 2.01
ARL6IP4-220ENST00000543566 LTN1O94822 1766 aa27.61■■■□□ 2.01
ARL6IP4-220ENST00000543566 PHRF1Q9P1Y6 1649 aaKnown RBP27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms