RNA–Protein interactions for RNA: ENST00000542896.5

PDCD2-209, Transcript of programmed cell death 2, humanhuman

TSL 2 BASIC

Gene PDCD2, Length 1,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-209ENST00000542896 ALS2Q96Q42 1657 aa37.82■■■■□ 3.64
PDCD2-209ENST00000542896 DEFB132Q7Z7B7 95 aa37.81■■■■□ 3.64
PDCD2-209ENST00000542896 NUDT16Q96DE0 195 aaKnown RBP37.81■■■■□ 3.64
PDCD2-209ENST00000542896 FAM98CQ17RN3 349 aaKnown RBP37.79■■■■□ 3.64
PDCD2-209ENST00000542896 ARHGEF28Q8N1W1 1705 aaKnown RBP37.77■■■■□ 3.64
PDCD2-209ENST00000542896 ATP7BP35670 1465 aa37.77■■■■□ 3.64
PDCD2-209ENST00000542896 COL14A1Q05707 1796 aaKnown RBP37.75■■■■□ 3.63
PDCD2-209ENST00000542896 CDK19Q9BWU1 502 aa37.75■■■■□ 3.63
PDCD2-209ENST00000542896 NRAPQ86VF7 1730 aa37.75■■■■□ 3.63
PDCD2-209ENST00000542896 PRDM11Q9NQV5 511 aa37.74■■■■□ 3.63
PDCD2-209ENST00000542896 ITSN1Q15811 1721 aa37.69■■■■□ 3.62
PDCD2-209ENST00000542896 SPATA31A5Q5VU36 1347 aa37.68■■■■□ 3.62
PDCD2-209ENST00000542896 SPATA31A7Q8IWB4 1347 aa37.68■■■■□ 3.62
PDCD2-209ENST00000542896 CCDC61Q9Y6R9 512 aa37.66■■■■□ 3.62
PDCD2-209ENST00000542896 CRYBG1Q9Y4K1 1723 aa37.64■■■■□ 3.62
PDCD2-209ENST00000542896 BAG6P46379 1132 aa37.64■■■■□ 3.62
PDCD2-209ENST00000542896 NUTM2GQ5VZR2 741 aa37.64■■■■□ 3.62
PDCD2-209ENST00000542896 KIAA0232Q92628 1395 aa37.64■■■■□ 3.62
PDCD2-209ENST00000542896 ACEP12821 1306 aa37.63■■■■□ 3.62
PDCD2-209ENST00000542896 SRCAPQ6ZRS2 3230 aa37.63■■■■□ 3.61
PDCD2-209ENST00000542896 CHRNA2Q15822 529 aa37.62■■■■□ 3.61
PDCD2-209ENST00000542896 NBPF1Q3BBV0 1214 aa37.62■■■■□ 3.61
PDCD2-209ENST00000542896 NBPF8Q3BBV2 869 aa37.62■■■■□ 3.61
PDCD2-209ENST00000542896 POLR3AO14802 1390 aaPredicted RBP37.62■■■■□ 3.61
PDCD2-209ENST00000542896 ZC3H6P61129 1189 aaKnown RBP37.6■■■■□ 3.61
PDCD2-209ENST00000542896 KIAA1210Q9ULL0 1709 aa37.6■■■■□ 3.61
PDCD2-209ENST00000542896 PLEKHG3A1L390 1219 aa37.59■■■■□ 3.61
PDCD2-209ENST00000542896 STRN4Q9NRL3 753 aa37.59■■■■□ 3.61
PDCD2-209ENST00000542896 FAM182BQ5T319 152 aa37.57■■■■□ 3.6
PDCD2-209ENST00000542896 SPATA31A1Q5TZJ5 1347 aa37.56■■■■□ 3.6
PDCD2-209ENST00000542896 SRPK2P78362 688 aaKnown RBP37.55■■■■□ 3.6
PDCD2-209ENST00000542896 TOPAZ1Q8N9V7 1692 aa37.54■■■■□ 3.6
PDCD2-209ENST00000542896 ABTB2Q8N961 1025 aa37.54■■■■□ 3.6
PDCD2-209ENST00000542896 CENPJQ9HC77 1338 aaPredicted RBP37.53■■■■□ 3.6
PDCD2-209ENST00000542896 PHRF1Q9P1Y6 1649 aaKnown RBP37.53■■■■□ 3.6
PDCD2-209ENST00000542896 THSD7AQ9UPZ6 1657 aa37.5■■■■□ 3.59
PDCD2-209ENST00000542896 EVA1CP58658 441 aa37.5■■■■□ 3.59
PDCD2-209ENST00000542896 EN1Q05925 392 aaPredicted RBP37.49■■■■□ 3.59
PDCD2-209ENST00000542896 CABP2Q9NPB3 220 aa37.48■■■■□ 3.59
PDCD2-209ENST00000542896 PPIP5K1Q6PFW1 1433 aa37.47■■■■□ 3.59
PDCD2-209ENST00000542896 USP35Q9P2H5 1018 aa37.47■■■■□ 3.59
PDCD2-209ENST00000542896 PSDA5PKW4 1024 aaPredicted RBP37.45■■■■□ 3.59
PDCD2-209ENST00000542896 NLRP13Q86W25 1043 aa37.44■■■■□ 3.58
PDCD2-209ENST00000542896 USP19O94966 1318 aa37.43■■■■□ 3.58
PDCD2-209ENST00000542896 SSH2Q76I76 1423 aa37.43■■■■□ 3.58
PDCD2-209ENST00000542896 RGPD1P0DJD0 1748 aa37.42■■■■□ 3.58
PDCD2-209ENST00000542896 NRKQ7Z2Y5 1582 aa37.42■■■■□ 3.58
PDCD2-209ENST00000542896 FAM196AQ6ZSG2 479 aa37.41■■■■□ 3.58
PDCD2-209ENST00000542896 CPDO75976 1380 aa37.41■■■■□ 3.58
PDCD2-209ENST00000542896 BARGINQ6ZT62 677 aa37.39■■■■□ 3.58
PDCD2-209ENST00000542896 GCP02774 474 aa37.38■■■■□ 3.57
PDCD2-209ENST00000542896 LARP1Q6PKG0 1096 aaKnown RBP37.38■■■■□ 3.57
PDCD2-209ENST00000542896 L3MBTL2Q969R5 705 aa37.38■■■■□ 3.57
PDCD2-209ENST00000542896 DISP2A7MBM2 1401 aa37.37■■■■□ 3.57
PDCD2-209ENST00000542896 TRIM37O94972 964 aa37.37■■■■□ 3.57
PDCD2-209ENST00000542896 CAMTA1Q9Y6Y1 1673 aa37.37■■■■□ 3.57
PDCD2-209ENST00000542896 CABP1Q9NZU7 370 aa37.36■■■■□ 3.57
PDCD2-209ENST00000542896 BRD4O60885 1362 aaPredicted RBP37.36■■■■□ 3.57
PDCD2-209ENST00000542896 PDE3BQ13370 1112 aa37.35■■■■□ 3.57
PDCD2-209ENST00000542896 TCP11L2Q8N4U5 519 aa37.35■■■■□ 3.57
PDCD2-209ENST00000542896 EZH2Q15910 746 aaKnown RBP37.33■■■■□ 3.57
PDCD2-209ENST00000542896 QRICH2Q9H0J4 1663 aa37.31■■■■□ 3.56
PDCD2-209ENST00000542896 LRP5O75197 1615 aa37.31■■■■□ 3.56
PDCD2-209ENST00000542896 ZBTB7CA1YPR0 619 aa37.3■■■■□ 3.56
PDCD2-209ENST00000542896 NLRP6P59044 892 aa37.3■■■■□ 3.56
PDCD2-209ENST00000542896 R3HDM1Q15032 1099 aaKnown RBP37.3■■■■□ 3.56
PDCD2-209ENST00000542896 USP6P35125 1406 aa37.29■■■■□ 3.56
PDCD2-209ENST00000542896 LMO7Q8WWI1 1683 aa37.29■■■■□ 3.56
PDCD2-209ENST00000542896 SIN3AQ96ST3 1273 aa37.29■■■■□ 3.56
PDCD2-209ENST00000542896 TNS1Q9HBL0 1735 aaKnown RBP37.29■■■■□ 3.56
PDCD2-209ENST00000542896 EVC2Q86UK5 1308 aa37.29■■■■□ 3.56
PDCD2-209ENST00000542896 APBA3O96018 575 aa37.28■■■■□ 3.56
PDCD2-209ENST00000542896 THRAP3Q9Y2W1 955 aaKnown RBP37.28■■■■□ 3.56
PDCD2-209ENST00000542896 CAMKK2Q96RR4 588 aa37.27■■■■□ 3.56
PDCD2-209ENST00000542896 NEUROD1Q13562 356 aa37.24■■■■□ 3.55
PDCD2-209ENST00000542896 COL5A2P05997 1499 aaPredicted RBP37.24■■■■□ 3.55
PDCD2-209ENST00000542896 ROCK2O75116 1388 aaKnown RBP37.22■■■■□ 3.55
PDCD2-209ENST00000542896 PARD3Q8TEW0 1356 aa37.21■■■■□ 3.55
PDCD2-209ENST00000542896 AATKQ6ZMQ8 1374 aa37.19■■■■□ 3.54
PDCD2-209ENST00000542896 CRB1P82279 1406 aa37.19■■■■□ 3.54
PDCD2-209ENST00000542896 TRPM1Q7Z4N2 1603 aa37.18■■■■□ 3.54
PDCD2-209ENST00000542896 SLIT3O75094 1523 aa37.17■■■■□ 3.54
PDCD2-209ENST00000542896 ZNF692Q9BU19 519 aaPredicted RBP37.15■■■■□ 3.54
PDCD2-209ENST00000542896 TOM1L2Q6ZVM7 507 aa37.13■■■■□ 3.53
PDCD2-209ENST00000542896 TTC21BQ7Z4L5 1316 aa37.11■■■■□ 3.53
PDCD2-209ENST00000542896 C11orf95C9JLR9 678 aaPredicted RBP37.11■■■■□ 3.53
PDCD2-209ENST00000542896 PIK3C2AO00443 1686 aa37.09■■■■□ 3.53
PDCD2-209ENST00000542896 PARP4Q9UKK3 1724 aaKnown RBP37.08■■■■□ 3.53
PDCD2-209ENST00000542896 NBPF14Q5TI25 921 aa37.08■■■■□ 3.53
PDCD2-209ENST00000542896 KCNH5Q8NCM2 988 aa37.08■■■■□ 3.53
PDCD2-209ENST00000542896 SOX12O15370 315 aa37.06■■■■□ 3.52
PDCD2-209ENST00000542896 DDB1Q16531 1140 aa37.06■■■■□ 3.52
PDCD2-209ENST00000542896 AXIN2Q9Y2T1 843 aa37.06■■■■□ 3.52
PDCD2-209ENST00000542896 TTC21AQ8NDW8 1320 aa37.06■■■■□ 3.52
PDCD2-209ENST00000542896 OVOS2A0A0G2JMS6 1433 aa37.05■■■■□ 3.52
PDCD2-209ENST00000542896 OVOS2A0A0J9YW53 1432 aa37.05■■■■□ 3.52
PDCD2-209ENST00000542896 CPSF1Q10570 1443 aaKnown RBP37.05■■■■□ 3.52
PDCD2-209ENST00000542896 OVOS2Q6IE36 1432 aa37.05■■■■□ 3.52
PDCD2-209ENST00000542896 WDR17Q8IZU2 1322 aa37.05■■■■□ 3.52
PDCD2-209ENST00000542896 ARHGEF25Q86VW2 580 aa37.04■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms