RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 SPINK5Q9NQ38 1064 aaPredicted RBP10.04□□□□□ -0.8
PRKAB1-207ENST00000542698 ATP6V1DQ9Y5K8 247 aa10.04□□□□□ -0.8
PRKAB1-207ENST00000542698 ADGRL2O95490 1459 aa10.03□□□□□ -0.8
PRKAB1-207ENST00000542698 GOLGA6L6A8MZA4 724 aa10.03□□□□□ -0.8
PRKAB1-207ENST00000542698 NRDCO43847 1150 aa10.03□□□□□ -0.8
PRKAB1-207ENST00000542698 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.03□□□□□ -0.8
PRKAB1-207ENST00000542698 ATAD2Q6PL18 1390 aa10.03□□□□□ -0.8
PRKAB1-207ENST00000542698 SOCS7O14512 581 aa10.03□□□□□ -0.8
PRKAB1-207ENST00000542698 CAVIN1Q6NZI2 390 aaKnown RBP10.03□□□□□ -0.8
PRKAB1-207ENST00000542698 C14orf93Q9H972 538 aaKnown RBP10.03□□□□□ -0.8
PRKAB1-207ENST00000542698 ASXL1Q8IXJ9 1541 aa10.02□□□□□ -0.8
PRKAB1-207ENST00000542698 RAPGEF3O95398 923 aa10.02□□□□□ -0.8
PRKAB1-207ENST00000542698 NEK4P51957 841 aa10.02□□□□□ -0.8
PRKAB1-207ENST00000542698 TAOK2Q9UL54 1235 aa10.02□□□□□ -0.8
PRKAB1-207ENST00000542698 CARD14Q9BXL6 1004 aa10.02□□□□□ -0.81
PRKAB1-207ENST00000542698 THUMPD2Q9BTF0 503 aaKnown RBP10.02□□□□□ -0.81
PRKAB1-207ENST00000542698 SHANK2Q9UPX8 1470 aa10.02□□□□□ -0.81
PRKAB1-207ENST00000542698 SHROOM2Q13796 1616 aa10.01□□□□□ -0.81
PRKAB1-207ENST00000542698 HTATSF1O43719 755 aaKnown RBP10.01□□□□□ -0.81
PRKAB1-207ENST00000542698 NFE2L2Q16236 605 aa10.01□□□□□ -0.81
PRKAB1-207ENST00000542698 ALDH1L2Q3SY69 923 aa10.01□□□□□ -0.81
PRKAB1-207ENST00000542698 VSIG10Q8N0Z9 540 aa10.01□□□□□ -0.81
PRKAB1-207ENST00000542698 KDM2BQ8NHM5 1336 aa10.01□□□□□ -0.81
PRKAB1-207ENST00000542698 EIF2S2P20042 333 aaKnown RBP10.01□□□□□ -0.81
PRKAB1-207ENST00000542698 ABCC11Q96J66 1382 aa10.01□□□□□ -0.81
PRKAB1-207ENST00000542698 ESPNB1AK53 854 aa10.01□□□□□ -0.81
PRKAB1-207ENST00000542698 PRPF40AO75400 957 aaKnown RBP10.01□□□□□ -0.81
PRKAB1-207ENST00000542698 SULT6B1Q6IMI4 303 aa10.01□□□□□ -0.81
PRKAB1-207ENST00000542698 COL17A1Q9UMD9 1497 aaPredicted RBP10.01□□□□□ -0.81
PRKAB1-207ENST00000542698 PIK3C2GO75747 1445 aa10□□□□□ -0.81
PRKAB1-207ENST00000542698 DIAPH3Q9NSV4 1193 aa10□□□□□ -0.81
PRKAB1-207ENST00000542698 SLC4A2P04920 1241 aa10□□□□□ -0.81
PRKAB1-207ENST00000542698 RUFY2Q8WXA3 655 aa10□□□□□ -0.81
PRKAB1-207ENST00000542698 CWC22Q9HCG8 908 aaKnown RBP10□□□□□ -0.81
PRKAB1-207ENST00000542698 INSRP06213 1382 aa10□□□□□ -0.81
PRKAB1-207ENST00000542698 SEC24BO95487 1268 aa10□□□□□ -0.81
PRKAB1-207ENST00000542698 RLBP1P12271 317 aa10□□□□□ -0.81
PRKAB1-207ENST00000542698 PDZRN4Q6ZMN7 1036 aaPredicted RBP10□□□□□ -0.81
PRKAB1-207ENST00000542698 POLR3AO14802 1390 aaPredicted RBP10□□□□□ -0.81
PRKAB1-207ENST00000542698 GNAI3P08754 354 aa9.99□□□□□ -0.81
PRKAB1-207ENST00000542698 TEFQ10587 303 aa9.99□□□□□ -0.81
PRKAB1-207ENST00000542698 CCDC27Q2M243 656 aa9.99□□□□□ -0.81
PRKAB1-207ENST00000542698 MCM2P49736 904 aa9.99□□□□□ -0.81
PRKAB1-207ENST00000542698 NOS1P29475 1434 aa9.99□□□□□ -0.81
PRKAB1-207ENST00000542698 A0A0G2JS52 829 aa9.98□□□□□ -0.81
PRKAB1-207ENST00000542698 ZKSCAN1P17029 563 aaPredicted RBP9.98□□□□□ -0.81
PRKAB1-207ENST00000542698 CCDC173Q0VFZ6 552 aa9.98□□□□□ -0.81
PRKAB1-207ENST00000542698 HDAC1Q13547 482 aaPredicted RBP9.98□□□□□ -0.81
PRKAB1-207ENST00000542698 IDI1Q13907 227 aa9.98□□□□□ -0.81
PRKAB1-207ENST00000542698 TXNDC2Q86VQ3 553 aa9.98□□□□□ -0.81
PRKAB1-207ENST00000542698 RPAP2Q8IXW5 612 aaPredicted RBP9.98□□□□□ -0.81
PRKAB1-207ENST00000542698 RNF214Q8ND24 703 aa9.98□□□□□ -0.81
PRKAB1-207ENST00000542698 TNNQ9UQP3 1299 aa9.98□□□□□ -0.81
PRKAB1-207ENST00000542698 A2MP01023 1474 aa9.98□□□□□ -0.81
PRKAB1-207ENST00000542698 PLCH2O75038 1416 aa9.98□□□□□ -0.81
PRKAB1-207ENST00000542698 SYCP2Q9BX26 1530 aa9.98□□□□□ -0.81
PRKAB1-207ENST00000542698 ZNF692Q9BU19 519 aaPredicted RBP9.98□□□□□ -0.81
PRKAB1-207ENST00000542698 FAM13BQ9NYF5 915 aa9.98□□□□□ -0.81
PRKAB1-207ENST00000542698 C9orf78Q9NZ63 289 aaPredicted RBP9.98□□□□□ -0.81
PRKAB1-207ENST00000542698 CEP170Q5SW79 1584 aa9.98□□□□□ -0.81
PRKAB1-207ENST00000542698 DUOX2Q9NRD8 1548 aa9.98□□□□□ -0.81
PRKAB1-207ENST00000542698 ERC2O15083 957 aa9.98□□□□□ -0.81
PRKAB1-207ENST00000542698 MBD3O95983 291 aa9.98□□□□□ -0.81
PRKAB1-207ENST00000542698 NPC1L1Q9UHC9 1359 aa9.97□□□□□ -0.81
PRKAB1-207ENST00000542698 UBTFL1P0CB47 393 aaPredicted RBP9.97□□□□□ -0.81
PRKAB1-207ENST00000542698 RRS1Q15050 365 aaKnown RBP9.97□□□□□ -0.81
PRKAB1-207ENST00000542698 BMP2KLQ5H9B9 411 aa9.97□□□□□ -0.81
PRKAB1-207ENST00000542698 GNAI2P04899 355 aa9.97□□□□□ -0.81
PRKAB1-207ENST00000542698 SMC3Q9UQE7 1217 aa9.97□□□□□ -0.81
PRKAB1-207ENST00000542698 NSD2O96028 1365 aa9.96□□□□□ -0.81
PRKAB1-207ENST00000542698 FAM69CQ0P6D2 419 aa9.96□□□□□ -0.81
PRKAB1-207ENST00000542698 HSP90AB4PQ58FF6 505 aa9.96□□□□□ -0.81
PRKAB1-207ENST00000542698 TNPO1Q92973 898 aaKnown RBP9.96□□□□□ -0.81
PRKAB1-207ENST00000542698 CCDC61Q9Y6R9 512 aa9.96□□□□□ -0.81
PRKAB1-207ENST00000542698 IL16Q14005 1332 aa9.96□□□□□ -0.81
PRKAB1-207ENST00000542698 RTEL1-TNFRSF6BF6WH68 1400 aa9.96□□□□□ -0.82
PRKAB1-207ENST00000542698 SURF6O75683 361 aaKnown RBP9.96□□□□□ -0.82
PRKAB1-207ENST00000542698 HSP90B1P14625 803 aaKnown RBP9.96□□□□□ -0.82
PRKAB1-207ENST00000542698 CCDC30Q5VVM6 783 aa9.96□□□□□ -0.82
PRKAB1-207ENST00000542698 DMRT2Q9Y5R5 561 aa9.96□□□□□ -0.82
PRKAB1-207ENST00000542698 ADGRL1O94910 1474 aa9.96□□□□□ -0.82
PRKAB1-207ENST00000542698 BLMP54132 1417 aaPredicted RBP9.96□□□□□ -0.82
PRKAB1-207ENST00000542698 IFIT2P09913 472 aaKnown RBP9.96□□□□□ -0.82
PRKAB1-207ENST00000542698 IFT57Q9NWB7 429 aa9.96□□□□□ -0.82
PRKAB1-207ENST00000542698 R3HCC1Q9Y3T6 440 aaKnown RBP9.96□□□□□ -0.82
PRKAB1-207ENST00000542698 CCT4P50991 539 aaKnown RBP9.95□□□□□ -0.82
PRKAB1-207ENST00000542698 NLRP6P59044 892 aa9.95□□□□□ -0.82
PRKAB1-207ENST00000542698 DCTN1Q14203 1278 aa9.95□□□□□ -0.82
PRKAB1-207ENST00000542698 WAPLQ7Z5K2 1190 aa9.95□□□□□ -0.82
PRKAB1-207ENST00000542698 GAS2L2Q8NHY3 880 aa9.95□□□□□ -0.82
PRKAB1-207ENST00000542698 ZMYM4Q5VZL5 1548 aa9.95□□□□□ -0.82
PRKAB1-207ENST00000542698 CHMP3Q9Y3E7 222 aa9.95□□□□□ -0.82
PRKAB1-207ENST00000542698 TRAPPC8Q9Y2L5 1435 aa9.95□□□□□ -0.82
PRKAB1-207ENST00000542698 VPS37CA5D8V6 355 aaPredicted RBP9.94□□□□□ -0.82
PRKAB1-207ENST00000542698 FYB1O15117 783 aa9.94□□□□□ -0.82
PRKAB1-207ENST00000542698 EIF2AK4Q9P2K8 1649 aaKnown RBP9.94□□□□□ -0.82
PRKAB1-207ENST00000542698 CSB-PGBD3P0DP91 1061 aa9.94□□□□□ -0.82
PRKAB1-207ENST00000542698 NUCB1Q02818 461 aa9.94□□□□□ -0.82
PRKAB1-207ENST00000542698 KIF3AQ9Y496 699 aa9.94□□□□□ -0.82
PRKAB1-207ENST00000542698 C1orf141Q5JVX7 400 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms