RNA–Protein interactions for RNA: ENST00000542128.5

KDM3A-216, Transcript of lysine demethylase 3A, humanhuman

TSL 5 BASIC

Gene KDM3A, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-216ENST00000542128 TERF1P54274 439 aa15.05■□□□□ 0
KDM3A-216ENST00000542128 HSPA2P54652 639 aa15.05■□□□□ 0
KDM3A-216ENST00000542128 SMC4Q9NTJ3 1288 aa15.05■□□□□ 0
KDM3A-216ENST00000542128 HDAC5Q9UQL6 1122 aa15.05■□□□□ 0
KDM3A-216ENST00000542128 TPM3P06753 285 aa15.05■□□□□ -0
KDM3A-216ENST00000542128 TOM1L2Q6ZVM7 507 aa15.05■□□□□ -0
KDM3A-216ENST00000542128 MIA2Q96PC5 1412 aa15.05■□□□□ -0
KDM3A-216ENST00000542128 CCDC112Q8NEF3 446 aa15.05■□□□□ -0
KDM3A-216ENST00000542128 PANK1Q8TE04 598 aa15.05■□□□□ -0
KDM3A-216ENST00000542128 UBAP1LF5GYI3 381 aa15.04■□□□□ -0
KDM3A-216ENST00000542128 PRIMPOLQ96LW4 560 aa15.04■□□□□ -0
KDM3A-216ENST00000542128 GNL2Q13823 731 aaKnown RBP15.04■□□□□ -0
KDM3A-216ENST00000542128 BRD4O60885 1362 aaPredicted RBP15.04■□□□□ -0
KDM3A-216ENST00000542128 PPP1R1BQ9UD71 204 aaPredicted RBP15.04■□□□□ -0
KDM3A-216ENST00000542128 PDZRN3Q9UPQ7 1066 aa15.04■□□□□ -0
KDM3A-216ENST00000542128 TIAM1Q13009 1591 aa15.04■□□□□ -0
KDM3A-216ENST00000542128 RRBP1Q9P2E9 1410 aaKnown RBP15.03■□□□□ -0
KDM3A-216ENST00000542128 ADAMTS2O95450 1211 aa15.03■□□□□ -0
KDM3A-216ENST00000542128 IDI1Q13907 227 aa15.03■□□□□ -0
KDM3A-216ENST00000542128 GPATCH11Q8N954 259 aa15.03■□□□□ -0
KDM3A-216ENST00000542128 PCF11O94913 1555 aaKnown RBP15.03■□□□□ -0
KDM3A-216ENST00000542128 TNPO1Q92973 898 aaKnown RBP15.03■□□□□ -0
KDM3A-216ENST00000542128 ASXL2Q76L83 1435 aa15.02■□□□□ -0
KDM3A-216ENST00000542128 ZC3H6P61129 1189 aaKnown RBP15.02■□□□□ -0
KDM3A-216ENST00000542128 TPD52L1Q16890 204 aaPredicted RBP15.02■□□□□ -0
KDM3A-216ENST00000542128 HMOX1P09601 288 aa15.02□□□□□ -0.01
KDM3A-216ENST00000542128 CDK19Q9BWU1 502 aa15.02□□□□□ -0.01
KDM3A-216ENST00000542128 CABP1Q9NZU7 370 aa15.02□□□□□ -0.01
KDM3A-216ENST00000542128 FANCAO15360 1455 aa15.01□□□□□ -0.01
KDM3A-216ENST00000542128 TRIM6-TRIM34B2RNG4 842 aa15.01□□□□□ -0.01
KDM3A-216ENST00000542128 C20orf194Q5TEA3 1177 aa15.01□□□□□ -0.01
KDM3A-216ENST00000542128 TRIM34Q9BYJ4 488 aa15.01□□□□□ -0.01
KDM3A-216ENST00000542128 CCAR2Q8N163 923 aaKnown RBP15.01□□□□□ -0.01
KDM3A-216ENST00000542128 NECTIN2Q92692 538 aa15.01□□□□□ -0.01
KDM3A-216ENST00000542128 ZKSCAN5Q9Y2L8 839 aa15.01□□□□□ -0.01
KDM3A-216ENST00000542128 DMTNQ08495 405 aa15.01□□□□□ -0.01
KDM3A-216ENST00000542128 C8orf34Q49A92 452 aa15.01□□□□□ -0.01
KDM3A-216ENST00000542128 ADAMTS12P58397 1594 aa15.01□□□□□ -0.01
KDM3A-216ENST00000542128 FOXO3O43524 673 aa15.01□□□□□ -0.01
KDM3A-216ENST00000542128 DDX54Q8TDD1 881 aaKnown RBP15□□□□□ -0.01
KDM3A-216ENST00000542128 NGLY1Q96IV0 654 aa15□□□□□ -0.01
KDM3A-216ENST00000542128 ANKRD45Q5TZF3 282 aa15□□□□□ -0.01
KDM3A-216ENST00000542128 SPC24Q8NBT2 197 aa14.99□□□□□ -0.01
KDM3A-216ENST00000542128 AMOTL2Q9Y2J4 779 aa14.99□□□□□ -0.01
KDM3A-216ENST00000542128 HFM1A2PYH4 1435 aa14.99□□□□□ -0.01
KDM3A-216ENST00000542128 APAF1O14727 1248 aa14.99□□□□□ -0.01
KDM3A-216ENST00000542128 GTF2A1P52655 376 aaPredicted RBP14.99□□□□□ -0.01
KDM3A-216ENST00000542128 UTP14CQ5TAP6 766 aaKnown RBP14.99□□□□□ -0.01
KDM3A-216ENST00000542128 SLC12A5Q9H2X9 1139 aa14.99□□□□□ -0.01
KDM3A-216ENST00000542128 GOLGA6L19H0YKK7 550 aa14.98□□□□□ -0.01
KDM3A-216ENST00000542128 SYCE3A1L190 88 aa14.98□□□□□ -0.01
KDM3A-216ENST00000542128 ATP10BO94823 1461 aa14.98□□□□□ -0.01
KDM3A-216ENST00000542128 NEXNQ0ZGT2 675 aa14.98□□□□□ -0.01
KDM3A-216ENST00000542128 RPGRIP1LQ68CZ1 1315 aa14.98□□□□□ -0.01
KDM3A-216ENST00000542128 TOM1O60784 492 aa14.98□□□□□ -0.01
KDM3A-216ENST00000542128 WAPLQ7Z5K2 1190 aa14.98□□□□□ -0.01
KDM3A-216ENST00000542128 HS1BP3Q53T59 392 aa14.97□□□□□ -0.01
KDM3A-216ENST00000542128 LEKR1Q6ZMV7 388 aa14.97□□□□□ -0.01
KDM3A-216ENST00000542128 MNS1Q8NEH6 495 aa14.97□□□□□ -0.01
KDM3A-216ENST00000542128 ZNF692Q9BU19 519 aaPredicted RBP14.97□□□□□ -0.01
KDM3A-216ENST00000542128 HOMER1Q86YM7 354 aa14.97□□□□□ -0.01
KDM3A-216ENST00000542128 K7ELQ4 463 aaPredicted RBP14.96□□□□□ -0.01
KDM3A-216ENST00000542128 GTF2F1P35269 517 aaKnown RBP eCLIP14.96□□□□□ -0.016e-9■■■■■ 33
KDM3A-216ENST00000542128 RBM42Q9BTD8 480 aaKnown RBP14.96□□□□□ -0.01
KDM3A-216ENST00000542128 AK7Q96M32 723 aa14.96□□□□□ -0.01
KDM3A-216ENST00000542128 LNPKQ9C0E8 428 aa14.96□□□□□ -0.01
KDM3A-216ENST00000542128 CCDC141Q6ZP82 1450 aa14.96□□□□□ -0.01
KDM3A-216ENST00000542128 TEX14Q8IWB6 1497 aa14.96□□□□□ -0.01
KDM3A-216ENST00000542128 ERBINQ96RT1 1412 aa14.96□□□□□ -0.01
KDM3A-216ENST00000542128 ZKSCAN2Q63HK3 967 aa14.96□□□□□ -0.01
KDM3A-216ENST00000542128 TPM4P67936 248 aa14.95□□□□□ -0.02
KDM3A-216ENST00000542128 ATP6V1DQ9Y5K8 247 aa14.95□□□□□ -0.02
KDM3A-216ENST00000542128 SUPT6HQ7KZ85 1726 aaKnown RBP14.95□□□□□ -0.02
KDM3A-216ENST00000542128 RTEL1-TNFRSF6BF6WH68 1400 aa14.95□□□□□ -0.02
KDM3A-216ENST00000542128 DAPK1P53355 1430 aa14.95□□□□□ -0.02
KDM3A-216ENST00000542128 NUP160Q12769 1436 aa14.95□□□□□ -0.02
KDM3A-216ENST00000542128 BECN2A8MW95 431 aa14.95□□□□□ -0.02
KDM3A-216ENST00000542128 TATP17735 454 aaPredicted RBP14.95□□□□□ -0.02
KDM3A-216ENST00000542128 RIPK4P57078 832 aa14.95□□□□□ -0.02
KDM3A-216ENST00000542128 CCDC61Q9Y6R9 512 aa14.95□□□□□ -0.02
KDM3A-216ENST00000542128 TBC1D32Q96NH3 1257 aa14.94□□□□□ -0.02
KDM3A-216ENST00000542128 ANKRD30BQ9BXX2 1392 aa14.94□□□□□ -0.02
KDM3A-216ENST00000542128 BCAR3O75815 825 aa14.93□□□□□ -0.02
KDM3A-216ENST00000542128 PDE3AQ14432 1141 aa14.93□□□□□ -0.02
KDM3A-216ENST00000542128 KLHL40Q2TBA0 621 aa14.93□□□□□ -0.02
KDM3A-216ENST00000542128 SSFA2P28290 1259 aa14.92□□□□□ -0.02
KDM3A-216ENST00000542128 NOL7Q9UMY1 257 aaKnown RBP14.92□□□□□ -0.02
KDM3A-216ENST00000542128 ADAMTS8Q9UP79 889 aa14.92□□□□□ -0.02
KDM3A-216ENST00000542128 FAM177BA6PVY3 158 aa14.92□□□□□ -0.02
KDM3A-216ENST00000542128 HMMRO75330 724 aa14.92□□□□□ -0.02
KDM3A-216ENST00000542128 CADPS2Q86UW7 1296 aa14.92□□□□□ -0.02
KDM3A-216ENST00000542128 KRT222Q8N1A0 295 aa14.92□□□□□ -0.02
KDM3A-216ENST00000542128 KIF14Q15058 1648 aa14.92□□□□□ -0.02
KDM3A-216ENST00000542128 MTHFSP49914 203 aa14.92□□□□□ -0.02
KDM3A-216ENST00000542128 NOLC1Q14978 699 aaKnown RBP eCLIP14.91□□□□□ -0.02
KDM3A-216ENST00000542128 NUDT16Q96DE0 195 aaKnown RBP14.91□□□□□ -0.02
KDM3A-216ENST00000542128 TRIM5Q9C035 493 aa14.91□□□□□ -0.02
KDM3A-216ENST00000542128 PLEKHO1Q53GL0 409 aaPredicted RBP14.91□□□□□ -0.02
KDM3A-216ENST00000542128 C9orf78Q9NZ63 289 aaPredicted RBP14.91□□□□□ -0.02
KDM3A-216ENST00000542128 TNNT1P13805 278 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms