RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 ALS2Q96Q42 1657 aa17.64■□□□□ 0.42
COPA-205ENST00000541366 POGKQ9P215 609 aa17.64■□□□□ 0.41
COPA-205ENST00000541366 PRR36Q9H6K5 1346 aa17.64■□□□□ 0.41
COPA-205ENST00000541366 THSD7AQ9UPZ6 1657 aa17.64■□□□□ 0.41
COPA-205ENST00000541366 TRIM37O94972 964 aa17.63■□□□□ 0.41
COPA-205ENST00000541366 CAMKK2Q96RR4 588 aa17.63■□□□□ 0.41
COPA-205ENST00000541366 DISP2A7MBM2 1401 aa17.63■□□□□ 0.41
COPA-205ENST00000541366 ANKARQ7Z5J8 1434 aa17.63■□□□□ 0.41
COPA-205ENST00000541366 MINK1Q8N4C8 1332 aaPredicted RBP17.61■□□□□ 0.41
COPA-205ENST00000541366 ACIN1Q9UKV3 1341 aaKnown RBP17.61■□□□□ 0.41
COPA-205ENST00000541366 PAK3O75914 559 aaPredicted RBP17.6■□□□□ 0.41
COPA-205ENST00000541366 CHRNA2Q15822 529 aa17.6■□□□□ 0.41
COPA-205ENST00000541366 PRDM11Q9NQV5 511 aa17.6■□□□□ 0.41
COPA-205ENST00000541366 TRAK1Q9UPV9 953 aa17.6■□□□□ 0.41
COPA-205ENST00000541366 GPRASP1Q5JY77 1395 aa17.6■□□□□ 0.41
COPA-205ENST00000541366 CRYBG1Q9Y4K1 1723 aa17.6■□□□□ 0.41
COPA-205ENST00000541366 SPATA31A1Q5TZJ5 1347 aa17.59■□□□□ 0.41
COPA-205ENST00000541366 ADGRB2O60241 1585 aa17.58■□□□□ 0.41
COPA-205ENST00000541366 DLC1Q96QB1 1528 aa17.58■□□□□ 0.41
COPA-205ENST00000541366 APBA3O96018 575 aa17.58■□□□□ 0.4
COPA-205ENST00000541366 STRN4Q9NRL3 753 aa17.58■□□□□ 0.4
COPA-205ENST00000541366 KIAA0232Q92628 1395 aa17.56■□□□□ 0.4
COPA-205ENST00000541366 YY1P25490 414 aa17.56■□□□□ 0.4
COPA-205ENST00000541366 FAM196AQ6ZSG2 479 aa17.56■□□□□ 0.4
COPA-205ENST00000541366 NGDNQ8NEJ9 315 aaKnown RBP17.56■□□□□ 0.4
COPA-205ENST00000541366 USP35Q9P2H5 1018 aa17.56■□□□□ 0.4
COPA-205ENST00000541366 ADGRB1O14514 1584 aa17.55■□□□□ 0.4
COPA-205ENST00000541366 NUTM2GQ5VZR2 741 aa17.55■□□□□ 0.4
COPA-205ENST00000541366 TULP4Q9NRJ4 1543 aa17.54■□□□□ 0.4
COPA-205ENST00000541366 WASLO00401 505 aaPredicted RBP17.54■□□□□ 0.4
COPA-205ENST00000541366 ZC3H6P61129 1189 aaKnown RBP17.54■□□□□ 0.4
COPA-205ENST00000541366 NUP188Q5SRE5 1749 aa17.52■□□□□ 0.39
COPA-205ENST00000541366 RREB1Q92766 1687 aa17.52■□□□□ 0.39
COPA-205ENST00000541366 PHRF1Q9P1Y6 1649 aaKnown RBP17.5■□□□□ 0.39
COPA-205ENST00000541366 PDE3BQ13370 1112 aa17.49■□□□□ 0.39
COPA-205ENST00000541366 KDM2AQ9Y2K7 1162 aa17.49■□□□□ 0.39
COPA-205ENST00000541366 EIF3AQ14152 1382 aaKnown RBP17.49■□□□□ 0.39
COPA-205ENST00000541366 PARD3Q8TEW0 1356 aa17.49■□□□□ 0.39
COPA-205ENST00000541366 LARP1Q6PKG0 1096 aaKnown RBP17.48■□□□□ 0.39
COPA-205ENST00000541366 NUDT16Q96DE0 195 aaKnown RBP17.48■□□□□ 0.39
COPA-205ENST00000541366 SSH2Q76I76 1423 aa17.47■□□□□ 0.39
COPA-205ENST00000541366 EVA1CP58658 441 aa17.47■□□□□ 0.39
COPA-205ENST00000541366 NBPF8Q3BBV2 869 aa17.47■□□□□ 0.39
COPA-205ENST00000541366 NBPF14Q5TI25 921 aa17.47■□□□□ 0.39
COPA-205ENST00000541366 ATP7BP35670 1465 aa17.47■□□□□ 0.39
COPA-205ENST00000541366 CAMTA1Q9Y6Y1 1673 aa17.46■□□□□ 0.39
COPA-205ENST00000541366 BARGINQ6ZT62 677 aa17.46■□□□□ 0.39
COPA-205ENST00000541366 PPP1R1BQ9UD71 204 aaPredicted RBP17.46■□□□□ 0.39
COPA-205ENST00000541366 UTRNP46939 3433 aa17.45■□□□□ 0.38
COPA-205ENST00000541366 KCNQ2O43526 872 aa17.44■□□□□ 0.38
COPA-205ENST00000541366 SPON1Q9HCB6 807 aa17.44■□□□□ 0.38
COPA-205ENST00000541366 TCP11L2Q8N4U5 519 aa17.43■□□□□ 0.38
COPA-205ENST00000541366 DCAF11Q8TEB1 546 aa17.43■□□□□ 0.38
COPA-205ENST00000541366 ITSN1Q15811 1721 aa17.42■□□□□ 0.38
COPA-205ENST00000541366 ACEP12821 1306 aa17.42■□□□□ 0.38
COPA-205ENST00000541366 NRKQ7Z2Y5 1582 aa17.41■□□□□ 0.38
COPA-205ENST00000541366 CDK19Q9BWU1 502 aa17.41■□□□□ 0.38
COPA-205ENST00000541366 ARHGEF28Q8N1W1 1705 aaKnown RBP17.41■□□□□ 0.38
COPA-205ENST00000541366 LMO7Q8WWI1 1683 aa17.4■□□□□ 0.38
COPA-205ENST00000541366 PTF1AQ7RTS3 328 aa17.4■□□□□ 0.38
COPA-205ENST00000541366 PDGFDQ9GZP0 370 aaPredicted RBP17.4■□□□□ 0.38
COPA-205ENST00000541366 ANO8Q9HCE9 1232 aaPredicted RBP17.4■□□□□ 0.38
COPA-205ENST00000541366 ABTB2Q8N961 1025 aa17.39■□□□□ 0.37
COPA-205ENST00000541366 POLR3AO14802 1390 aaPredicted RBP17.39■□□□□ 0.37
COPA-205ENST00000541366 NINLQ9Y2I6 1382 aa17.38■□□□□ 0.37
COPA-205ENST00000541366 USP19O94966 1318 aa17.37■□□□□ 0.37
COPA-205ENST00000541366 CPDO75976 1380 aa17.37■□□□□ 0.37
COPA-205ENST00000541366 TOPAZ1Q8N9V7 1692 aa17.36■□□□□ 0.37
COPA-205ENST00000541366 PARP4Q9UKK3 1724 aaKnown RBP17.36■□□□□ 0.37
COPA-205ENST00000541366 ZBTB7CA1YPR0 619 aa17.36■□□□□ 0.37
COPA-205ENST00000541366 DCAF8L1A6NGE4 600 aa17.36■□□□□ 0.37
COPA-205ENST00000541366 GCP02774 474 aa17.35■□□□□ 0.37
COPA-205ENST00000541366 THRAP3Q9Y2W1 955 aaKnown RBP17.35■□□□□ 0.37
COPA-205ENST00000541366 CCDC61Q9Y6R9 512 aa17.35■□□□□ 0.37
COPA-205ENST00000541366 COL5A2P05997 1499 aaPredicted RBP17.35■□□□□ 0.37
COPA-205ENST00000541366 PEAK1Q9H792 1746 aa17.35■□□□□ 0.37
COPA-205ENST00000541366 PLEKHG3A1L390 1219 aa17.34■□□□□ 0.37
COPA-205ENST00000541366 ZBTB7AO95365 584 aa17.34■□□□□ 0.37
COPA-205ENST00000541366 SBF2Q86WG5 1849 aa17.34■□□□□ 0.37
COPA-205ENST00000541366 RAB3GAP2Q9H2M9 1393 aa17.34■□□□□ 0.37
COPA-205ENST00000541366 CASZ1Q86V15 1759 aa17.33■□□□□ 0.37
COPA-205ENST00000541366 OVOS2A0A0G2JMS6 1433 aa17.33■□□□□ 0.36
COPA-205ENST00000541366 OVOS2A0A0J9YW53 1432 aa17.33■□□□□ 0.36
COPA-205ENST00000541366 OVOS2Q6IE36 1432 aa17.33■□□□□ 0.36
COPA-205ENST00000541366 PROM2Q8N271 834 aa17.33■□□□□ 0.36
COPA-205ENST00000541366 PLSCR1O15162 318 aa17.32■□□□□ 0.36
COPA-205ENST00000541366 CRB1P82279 1406 aa17.31■□□□□ 0.36
COPA-205ENST00000541366 NLRP13Q86W25 1043 aa17.31■□□□□ 0.36
COPA-205ENST00000541366 ZNF784Q8NCA9 323 aaPredicted RBP17.31■□□□□ 0.36
COPA-205ENST00000541366 ATF5Q9Y2D1 282 aaPredicted RBP17.31■□□□□ 0.36
COPA-205ENST00000541366 LRRC37A3O60309 1634 aa17.31■□□□□ 0.36
COPA-205ENST00000541366 MYOM1P52179 1685 aa17.3■□□□□ 0.36
COPA-205ENST00000541366 PTGER2P43116 358 aa17.3■□□□□ 0.36
COPA-205ENST00000541366 DDB1Q16531 1140 aa17.3■□□□□ 0.36
COPA-205ENST00000541366 BCL11BQ9C0K0 894 aaPredicted RBP17.3■□□□□ 0.36
COPA-205ENST00000541366 MARCH10Q8NA82 808 aaPredicted RBP17.29■□□□□ 0.36
COPA-205ENST00000541366 RGPD3A6NKT7 1758 aaPredicted RBP17.28■□□□□ 0.36
COPA-205ENST00000541366 RGPD4Q7Z3J3 1758 aa17.28■□□□□ 0.36
COPA-205ENST00000541366 CABP2Q9NPB3 220 aa17.28■□□□□ 0.36
COPA-205ENST00000541366 PPIP5K1Q6PFW1 1433 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms