RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 ZNF335Q9H4Z2 1342 aaPredicted RBP15.76■□□□□ 0.11
VTN-202ENST00000539746 FYB1O15117 783 aa15.76■□□□□ 0.11
VTN-202ENST00000539746 KCNH5Q8NCM2 988 aa15.76■□□□□ 0.11
VTN-202ENST00000539746 AKAP12Q02952 1782 aa15.76■□□□□ 0.11
VTN-202ENST00000539746 IQSEC2Q5JU85 1478 aa15.76■□□□□ 0.11
VTN-202ENST00000539746 KIF24Q5T7B8 1368 aa15.75■□□□□ 0.11
VTN-202ENST00000539746 PPP2R1AP30153 589 aa15.75■□□□□ 0.11
VTN-202ENST00000539746 USP31Q70CQ4 1352 aa15.75■□□□□ 0.11
VTN-202ENST00000539746 NEFMP07197 916 aa15.74■□□□□ 0.11
VTN-202ENST00000539746 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.74■□□□□ 0.11
VTN-202ENST00000539746 ANKRD26Q9UPS8 1709 aa15.74■□□□□ 0.11
VTN-202ENST00000539746 KIF20BQ96Q89 1820 aa15.73■□□□□ 0.11
VTN-202ENST00000539746 NUTM2FA1L443 756 aa15.73■□□□□ 0.11
VTN-202ENST00000539746 MST1RQ04912 1400 aa15.73■□□□□ 0.11
VTN-202ENST00000539746 SBNO1A3KN83 1393 aa15.73■□□□□ 0.11
VTN-202ENST00000539746 ARHGEF10O15013 1369 aa15.73■□□□□ 0.11
VTN-202ENST00000539746 PMFBP1Q8TBY8 1022 aa15.72■□□□□ 0.11
VTN-202ENST00000539746 SLAIN2Q9P270 581 aa15.72■□□□□ 0.11
VTN-202ENST00000539746 TOM1O60784 492 aa15.71■□□□□ 0.11
VTN-202ENST00000539746 PAK3O75914 559 aaPredicted RBP15.71■□□□□ 0.11
VTN-202ENST00000539746 CNGB1Q14028 1251 aaPredicted RBP15.71■□□□□ 0.11
VTN-202ENST00000539746 SSH2Q76I76 1423 aa15.7■□□□□ 0.1
VTN-202ENST00000539746 ABTB2Q8N961 1025 aa15.7■□□□□ 0.1
VTN-202ENST00000539746 GGNBP2Q9H3C7 697 aa15.7■□□□□ 0.1
VTN-202ENST00000539746 NRKQ7Z2Y5 1582 aa15.69■□□□□ 0.1
VTN-202ENST00000539746 NLRP6P59044 892 aa15.68■□□□□ 0.1
VTN-202ENST00000539746 RTL1A6NKG5 1358 aa15.67■□□□□ 0.1
VTN-202ENST00000539746 KRT28Q7Z3Y7 464 aa15.67■□□□□ 0.1
VTN-202ENST00000539746 PNISRQ8TF01 805 aaKnown RBP15.67■□□□□ 0.1
VTN-202ENST00000539746 OVOS2A0A0J9YW53 1432 aa15.67■□□□□ 0.1
VTN-202ENST00000539746 OVOS2Q6IE36 1432 aa15.67■□□□□ 0.1
VTN-202ENST00000539746 STRCP1A6NGW2 1772 aa15.67■□□□□ 0.1
VTN-202ENST00000539746 FAM9BQ8IZU0 186 aa15.66■□□□□ 0.1
VTN-202ENST00000539746 CDK12Q9NYV4 1490 aaPredicted RBP15.65■□□□□ 0.1
VTN-202ENST00000539746 FOXO3O43524 673 aa15.65■□□□□ 0.1
VTN-202ENST00000539746 MTHFSP49914 203 aa15.65■□□□□ 0.1
VTN-202ENST00000539746 NME9Q86XW9 330 aa15.65■□□□□ 0.1
VTN-202ENST00000539746 SMG6Q86US8 1419 aaKnown RBP15.65■□□□□ 0.1
VTN-202ENST00000539746 USP54Q70EL1 1684 aa15.64■□□□□ 0.09
VTN-202ENST00000539746 DIAPH1O60610 1272 aaKnown RBP15.64■□□□□ 0.09
VTN-202ENST00000539746 NCBP3Q53F19 620 aaKnown RBP15.64■□□□□ 0.09
VTN-202ENST00000539746 RBM33Q96EV2 1170 aaKnown RBP15.64■□□□□ 0.09
VTN-202ENST00000539746 TNNT2P45379 298 aaPredicted RBP15.63■□□□□ 0.09
VTN-202ENST00000539746 ORAI2Q96SN7 254 aa15.63■□□□□ 0.09
VTN-202ENST00000539746 FLT4P35916 1363 aa15.62■□□□□ 0.09
VTN-202ENST00000539746 TNS3Q68CZ2 1445 aa15.62■□□□□ 0.09
VTN-202ENST00000539746 BRINP3Q76B58 766 aa15.62■□□□□ 0.09
VTN-202ENST00000539746 PNPLA6Q8IY17 1366 aa15.62■□□□□ 0.09
VTN-202ENST00000539746 LTBP4Q8N2S1 1624 aa15.61■□□□□ 0.09
VTN-202ENST00000539746 AMPHP49418 695 aa15.61■□□□□ 0.09
VTN-202ENST00000539746 HNRNPUQ00839 825 aaKnown RBP eCLIP15.6■□□□□ 0.09
VTN-202ENST00000539746 PDE3BQ13370 1112 aa15.6■□□□□ 0.09
VTN-202ENST00000539746 LMOD2Q6P5Q4 547 aa15.6■□□□□ 0.09
VTN-202ENST00000539746 LRRC59Q96AG4 307 aaKnown RBP15.6■□□□□ 0.09
VTN-202ENST00000539746 ABCC6O95255 1503 aa15.59■□□□□ 0.09
VTN-202ENST00000539746 YTHDC1Q96MU7 727 aaKnown RBP15.59■□□□□ 0.09
VTN-202ENST00000539746 POLKQ9UBT6 870 aa15.59■□□□□ 0.09
VTN-202ENST00000539746 ZBED9Q6R2W3 1325 aa15.59■□□□□ 0.09
VTN-202ENST00000539746 MAPK8IP3Q9UPT6 1336 aa15.59■□□□□ 0.09
VTN-202ENST00000539746 RGPD8O14715 1765 aaPredicted RBP15.59■□□□□ 0.09
VTN-202ENST00000539746 PPM1GO15355 546 aaPredicted RBP15.58■□□□□ 0.08
VTN-202ENST00000539746 HAP1P54257 671 aaPredicted RBP15.58■□□□□ 0.08
VTN-202ENST00000539746 USP19O94966 1318 aa15.58■□□□□ 0.08
VTN-202ENST00000539746 SOS2Q07890 1332 aaPredicted RBP15.58■□□□□ 0.08
VTN-202ENST00000539746 SPATA31A3Q5VYP0 1347 aa15.58■□□□□ 0.08
VTN-202ENST00000539746 FCHSD2O94868 740 aa15.57■□□□□ 0.08
VTN-202ENST00000539746 XIRP1Q702N8 1843 aaKnown RBP15.57■□□□□ 0.08
VTN-202ENST00000539746 U2AF1L5P0DN76 240 aaPredicted RBP15.56■□□□□ 0.08
VTN-202ENST00000539746 U2AF1Q01081 240 aaKnown RBP eCLIP15.56■□□□□ 0.08
VTN-202ENST00000539746 BLMP54132 1417 aaPredicted RBP15.56■□□□□ 0.08
VTN-202ENST00000539746 PIK3C2AO00443 1686 aa15.56■□□□□ 0.08
VTN-202ENST00000539746 MED1Q15648 1581 aaPredicted RBP15.55■□□□□ 0.08
VTN-202ENST00000539746 PXDNQ92626 1479 aa15.55■□□□□ 0.08
VTN-202ENST00000539746 PLEKHG2Q9H7P9 1386 aa15.55■□□□□ 0.08
VTN-202ENST00000539746 CALD1Q05682 793 aaKnown RBP15.55■□□□□ 0.08
VTN-202ENST00000539746 LMOD3Q0VAK6 560 aa15.55■□□□□ 0.08
VTN-202ENST00000539746 RUNDC1Q96C34 613 aa15.55■□□□□ 0.08
VTN-202ENST00000539746 SLIT3O75094 1523 aa15.54■□□□□ 0.08
VTN-202ENST00000539746 U2SURPO15042 1029 aaKnown RBP15.54■□□□□ 0.08
VTN-202ENST00000539746 GCP02774 474 aa15.54■□□□□ 0.08
VTN-202ENST00000539746 AHDC1Q5TGY3 1603 aaPredicted RBP15.54■□□□□ 0.08
VTN-202ENST00000539746 ADAMTS8Q9UP79 889 aa15.53■□□□□ 0.08
VTN-202ENST00000539746 TRPM3Q9HCF6 1732 aaPredicted RBP15.53■□□□□ 0.08
VTN-202ENST00000539746 IP6K1Q92551 441 aa15.52■□□□□ 0.08
VTN-202ENST00000539746 CPDO75976 1380 aa15.51■□□□□ 0.07
VTN-202ENST00000539746 NHSL1Q5SYE7 1610 aa15.51■□□□□ 0.07
VTN-202ENST00000539746 PHRF1Q9P1Y6 1649 aaKnown RBP15.51■□□□□ 0.07
VTN-202ENST00000539746 MAP3K19Q56UN5 1328 aa15.51■□□□□ 0.07
VTN-202ENST00000539746 UBAP1LF5GYI3 381 aa15.51■□□□□ 0.07
VTN-202ENST00000539746 CERKQ8TCT0 537 aa15.5■□□□□ 0.07
VTN-202ENST00000539746 EMILIN1Q9Y6C2 1016 aa15.5■□□□□ 0.07
VTN-202ENST00000539746 ALS2Q96Q42 1657 aa15.5■□□□□ 0.07
VTN-202ENST00000539746 RRS1Q15050 365 aaKnown RBP15.49■□□□□ 0.07
VTN-202ENST00000539746 CCDC184Q52MB2 194 aa15.49■□□□□ 0.07
VTN-202ENST00000539746 COL3A1P02461 1466 aaPredicted RBP15.48■□□□□ 0.07
VTN-202ENST00000539746 HOXC9P31274 260 aa15.48■□□□□ 0.07
VTN-202ENST00000539746 CCDC27Q2M243 656 aa15.48■□□□□ 0.07
VTN-202ENST00000539746 ARHGEF25Q86VW2 580 aa15.48■□□□□ 0.07
VTN-202ENST00000539746 NFAT5O94916 1531 aa15.48■□□□□ 0.07
VTN-202ENST00000539746 IL13P35225 146 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms