RNA–Protein interactions for RNA: ENST00000539484.1

CCDC144NL-203, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 751 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-203ENST00000539484 ZFYVE9O95405 1425 aa13.78□□□□□ -0.2
CCDC144NL-203ENST00000539484 IQGAP3Q86VI3 1631 aa13.78□□□□□ -0.2
CCDC144NL-203ENST00000539484 ITGAEP38570 1179 aa13.77□□□□□ -0.21
CCDC144NL-203ENST00000539484 ROCK1Q13464 1354 aa13.77□□□□□ -0.21
CCDC144NL-203ENST00000539484 PLA2G2EQ9NZK7 142 aa13.77□□□□□ -0.21
CCDC144NL-203ENST00000539484 RIOK3O14730 519 aaKnown RBP13.76□□□□□ -0.21
CCDC144NL-203ENST00000539484 SLAIN2Q9P270 581 aa13.76□□□□□ -0.21
CCDC144NL-203ENST00000539484 TBX22Q9Y458 520 aa13.76□□□□□ -0.21
CCDC144NL-203ENST00000539484 NUP155O75694 1391 aa13.75□□□□□ -0.21
CCDC144NL-203ENST00000539484 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.75□□□□□ -0.21
CCDC144NL-203ENST00000539484 PBX2P40425 430 aa13.75□□□□□ -0.21
CCDC144NL-203ENST00000539484 ZFP91Q96JP5 570 aaPredicted RBP13.75□□□□□ -0.21
CCDC144NL-203ENST00000539484 DIP2AQ14689 1571 aa13.75□□□□□ -0.21
CCDC144NL-203ENST00000539484 NUTM2DQ5VT03 806 aaPredicted RBP13.74□□□□□ -0.21
CCDC144NL-203ENST00000539484 SPHKAPQ2M3C7 1700 aa13.73□□□□□ -0.21
CCDC144NL-203ENST00000539484 NCOA3Q9Y6Q9 1424 aa13.73□□□□□ -0.21
CCDC144NL-203ENST00000539484 ATF3P18847 181 aa13.72□□□□□ -0.21
CCDC144NL-203ENST00000539484 RGS17Q9UGC6 210 aaPredicted RBP13.72□□□□□ -0.21
CCDC144NL-203ENST00000539484 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.72□□□□□ -0.21
CCDC144NL-203ENST00000539484 PIK3R4Q99570 1358 aa13.71□□□□□ -0.21
CCDC144NL-203ENST00000539484 JCADQ9P266 1359 aa13.71□□□□□ -0.21
CCDC144NL-203ENST00000539484 TRPM2O94759 1503 aa13.71□□□□□ -0.21
CCDC144NL-203ENST00000539484 CADPS2Q86UW7 1296 aa13.71□□□□□ -0.21
CCDC144NL-203ENST00000539484 HCSTQ9UBK5 93 aa13.71□□□□□ -0.21
CCDC144NL-203ENST00000539484 VGFO15240 615 aaPredicted RBP13.7□□□□□ -0.22
CCDC144NL-203ENST00000539484 ZNF326Q5BKZ1 582 aaKnown RBP13.7□□□□□ -0.22
CCDC144NL-203ENST00000539484 NUDT7P0C024 238 aa13.69□□□□□ -0.22
CCDC144NL-203ENST00000539484 PPARGC1BQ86YN6 1023 aaKnown RBP13.69□□□□□ -0.22
CCDC144NL-203ENST00000539484 C19orf44Q9H6X5 657 aa13.69□□□□□ -0.22
CCDC144NL-203ENST00000539484 ADAMTS13Q76LX8 1427 aa13.69□□□□□ -0.22
CCDC144NL-203ENST00000539484 KIF1BO60333 1816 aa13.69□□□□□ -0.22
CCDC144NL-203ENST00000539484 NLRP6P59044 892 aa13.68□□□□□ -0.22
CCDC144NL-203ENST00000539484 MEX3CQ5U5Q3 659 aaKnown RBP13.68□□□□□ -0.22
CCDC144NL-203ENST00000539484 POTEAQ6S8J7 498 aa13.68□□□□□ -0.22
CCDC144NL-203ENST00000539484 AMOTL2Q9Y2J4 779 aa13.68□□□□□ -0.22
CCDC144NL-203ENST00000539484 AXIN2Q9Y2T1 843 aa13.68□□□□□ -0.22
CCDC144NL-203ENST00000539484 COL16A1Q07092 1604 aaPredicted RBP13.67□□□□□ -0.22
CCDC144NL-203ENST00000539484 RNF25Q96BH1 459 aaPredicted RBP13.66□□□□□ -0.22
CCDC144NL-203ENST00000539484 POTEEQ6S8J3 1075 aa13.65□□□□□ -0.22
CCDC144NL-203ENST00000539484 SPATA31A6Q5VVP1 1343 aa13.64□□□□□ -0.23
CCDC144NL-203ENST00000539484 LHX6Q9UPM6 363 aa13.64□□□□□ -0.23
CCDC144NL-203ENST00000539484 AHDC1Q5TGY3 1603 aaPredicted RBP13.64□□□□□ -0.23
CCDC144NL-203ENST00000539484 SHPRHQ149N8 1683 aa13.63□□□□□ -0.23
CCDC144NL-203ENST00000539484 SETD1AO15047 1707 aaKnown RBP13.63□□□□□ -0.23
CCDC144NL-203ENST00000539484 SETBP1Q9Y6X0 1596 aa13.62□□□□□ -0.23
CCDC144NL-203ENST00000539484 ZNF772Q68DY9 489 aaPredicted RBP13.62□□□□□ -0.23
CCDC144NL-203ENST00000539484 DCCP43146 1447 aa13.62□□□□□ -0.23
CCDC144NL-203ENST00000539484 PTPRUQ92729 1446 aa13.62□□□□□ -0.23
CCDC144NL-203ENST00000539484 XRN1Q8IZH2 1706 aaKnown RBP13.61□□□□□ -0.23
CCDC144NL-203ENST00000539484 NRXN3Q9Y4C0 1643 aa13.61□□□□□ -0.23
CCDC144NL-203ENST00000539484 C2orf72A6NCS6 295 aa13.6□□□□□ -0.23
CCDC144NL-203ENST00000539484 FBXO22Q8NEZ5 403 aa13.6□□□□□ -0.23
CCDC144NL-203ENST00000539484 TRIM52Q96A61 297 aa13.6□□□□□ -0.23
CCDC144NL-203ENST00000539484 CLTCL1P53675 1640 aa13.6□□□□□ -0.23
CCDC144NL-203ENST00000539484 KIF3CO14782 793 aa13.59□□□□□ -0.23
CCDC144NL-203ENST00000539484 BRINP3Q76B58 766 aa13.59□□□□□ -0.23
CCDC144NL-203ENST00000539484 PCDHGA4Q9Y5G9 962 aa13.59□□□□□ -0.23
CCDC144NL-203ENST00000539484 NUTM2BA6NNL0 878 aaPredicted RBP13.58□□□□□ -0.24
CCDC144NL-203ENST00000539484 NUTM2EB1AL46 878 aaPredicted RBP13.58□□□□□ -0.24
CCDC144NL-203ENST00000539484 NUTM2AQ8IVF1 878 aaPredicted RBP13.58□□□□□ -0.24
CCDC144NL-203ENST00000539484 ADGRD1Q6QNK2 874 aa13.57□□□□□ -0.24
CCDC144NL-203ENST00000539484 NEXMIFQ5QGS0 1516 aa13.57□□□□□ -0.24
CCDC144NL-203ENST00000539484 ASXL1Q8IXJ9 1541 aa13.57□□□□□ -0.24
CCDC144NL-203ENST00000539484 LRP6O75581 1613 aa13.57□□□□□ -0.24
CCDC144NL-203ENST00000539484 NHSL1Q5SYE7 1610 aa13.57□□□□□ -0.24
CCDC144NL-203ENST00000539484 LRRC59Q96AG4 307 aaKnown RBP13.56□□□□□ -0.24
CCDC144NL-203ENST00000539484 METP08581 1390 aa13.56□□□□□ -0.24
CCDC144NL-203ENST00000539484 NALCNQ8IZF0 1738 aa13.56□□□□□ -0.24
CCDC144NL-203ENST00000539484 RRBP1Q9P2E9 1410 aaKnown RBP13.56□□□□□ -0.24
CCDC144NL-203ENST00000539484 ARHGAP33O14559 1287 aa13.55□□□□□ -0.24
CCDC144NL-203ENST00000539484 SLC34A2O95436 690 aa13.55□□□□□ -0.24
CCDC144NL-203ENST00000539484 MST1RQ04912 1400 aa13.55□□□□□ -0.24
CCDC144NL-203ENST00000539484 NAIPQ13075 1403 aa13.55□□□□□ -0.24
CCDC144NL-203ENST00000539484 ADGRL3Q9HAR2 1447 aa13.55□□□□□ -0.24
CCDC144NL-203ENST00000539484 RXRBP28702 533 aa13.54□□□□□ -0.24
CCDC144NL-203ENST00000539484 BCL11BQ9C0K0 894 aaPredicted RBP13.54□□□□□ -0.24
CCDC144NL-203ENST00000539484 SETD5Q9C0A6 1442 aa13.53□□□□□ -0.24
CCDC144NL-203ENST00000539484 PPLO60437 1756 aa13.52□□□□□ -0.25
CCDC144NL-203ENST00000539484 RPGRIP1LQ68CZ1 1315 aa13.51□□□□□ -0.25
CCDC144NL-203ENST00000539484 AFF2P51816 1311 aa13.5□□□□□ -0.25
CCDC144NL-203ENST00000539484 C8orf37Q96NL8 207 aa13.5□□□□□ -0.25
CCDC144NL-203ENST00000539484 TAOK2Q9UL54 1235 aa13.5□□□□□ -0.25
CCDC144NL-203ENST00000539484 HFM1A2PYH4 1435 aa13.49□□□□□ -0.25
CCDC144NL-203ENST00000539484 PTCH1Q13635 1447 aa13.49□□□□□ -0.25
CCDC144NL-203ENST00000539484 PSDA5PKW4 1024 aaPredicted RBP13.49□□□□□ -0.25
CCDC144NL-203ENST00000539484 DDX17Q92841 729 aaKnown RBP13.49□□□□□ -0.25
CCDC144NL-203ENST00000539484 MFRPQ9BY79 579 aa13.49□□□□□ -0.25
CCDC144NL-203ENST00000539484 STK24Q9Y6E0 443 aa13.49□□□□□ -0.25
CCDC144NL-203ENST00000539484 C1orf167Q5SNV9 1468 aa13.48□□□□□ -0.25
CCDC144NL-203ENST00000539484 PNPLA6Q8IY17 1366 aa13.47□□□□□ -0.25
CCDC144NL-203ENST00000539484 TMC2Q8TDI7 906 aa13.47□□□□□ -0.25
CCDC144NL-203ENST00000539484 UPF1Q92900 1129 aaKnown RBP eCLIP13.47□□□□□ -0.25
CCDC144NL-203ENST00000539484 TK2O00142 265 aa13.46□□□□□ -0.25
CCDC144NL-203ENST00000539484 NGLY1Q96IV0 654 aa13.46□□□□□ -0.25
CCDC144NL-203ENST00000539484 QTRT2Q9H974 415 aaKnown RBP13.46□□□□□ -0.25
CCDC144NL-203ENST00000539484 CDK12Q9NYV4 1490 aaPredicted RBP13.46□□□□□ -0.25
CCDC144NL-203ENST00000539484 ADAMTS2O95450 1211 aa13.45□□□□□ -0.26
CCDC144NL-203ENST00000539484 ROBO2Q9HCK4 1378 aa13.45□□□□□ -0.26
CCDC144NL-203ENST00000539484 LAMC1P11047 1609 aa13.44□□□□□ -0.26
CCDC144NL-203ENST00000539484 RBM6P78332 1123 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms