RNA–Protein interactions for RNA: ENST00000538485.6

EFCAB11-202, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2 BASIC

Gene EFCAB11, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-202ENST00000538485 PHF8Q9UPP1 1060 aa26.28■■□□□ 1.8
EFCAB11-202ENST00000538485 TTC21BQ7Z4L5 1316 aa26.28■■□□□ 1.8
EFCAB11-202ENST00000538485 SSH2Q76I76 1423 aa26.28■■□□□ 1.8
EFCAB11-202ENST00000538485 DCCP43146 1447 aa26.27■■□□□ 1.8
EFCAB11-202ENST00000538485 ATF3P18847 181 aa26.25■■□□□ 1.79
EFCAB11-202ENST00000538485 ORAI2Q96SN7 254 aa26.25■■□□□ 1.79
EFCAB11-202ENST00000538485 ZRANB1Q9UGI0 708 aa26.25■■□□□ 1.79
EFCAB11-202ENST00000538485 C1orf167Q5SNV9 1468 aa26.24■■□□□ 1.79
EFCAB11-202ENST00000538485 MSH6P52701 1360 aa26.24■■□□□ 1.79
EFCAB11-202ENST00000538485 MST1RQ04912 1400 aa26.22■■□□□ 1.79
EFCAB11-202ENST00000538485 CADPS2Q86UW7 1296 aa26.21■■□□□ 1.79
EFCAB11-202ENST00000538485 MTHFSP49914 203 aa26.21■■□□□ 1.79
EFCAB11-202ENST00000538485 COG3Q96JB2 828 aa26.19■■□□□ 1.78
EFCAB11-202ENST00000538485 TTC21AQ8NDW8 1320 aa26.19■■□□□ 1.78
EFCAB11-202ENST00000538485 HNRNPUQ00839 825 aaKnown RBP eCLIP26.17■■□□□ 1.78
EFCAB11-202ENST00000538485 FOXO3O43524 673 aa26.16■■□□□ 1.78
EFCAB11-202ENST00000538485 FBLN1P23142 703 aa26.16■■□□□ 1.78
EFCAB11-202ENST00000538485 SCAF1Q9H7N4 1312 aaKnown RBP26.15■■□□□ 1.78
EFCAB11-202ENST00000538485 CENPBP07199 599 aaPredicted RBP26.15■■□□□ 1.78
EFCAB11-202ENST00000538485 OVOS2A0A0J9YW53 1432 aa26.15■■□□□ 1.78
EFCAB11-202ENST00000538485 OVOS2Q6IE36 1432 aa26.15■■□□□ 1.78
EFCAB11-202ENST00000538485 PSME1Q06323 249 aa26.15■■□□□ 1.78
EFCAB11-202ENST00000538485 PIK3C2AO00443 1686 aa26.13■■□□□ 1.77
EFCAB11-202ENST00000538485 KIF1AQ12756 1690 aa26.13■■□□□ 1.77
EFCAB11-202ENST00000538485 PAK3O75914 559 aaPredicted RBP26.12■■□□□ 1.77
EFCAB11-202ENST00000538485 MAP2P11137 1827 aaKnown RBP26.11■■□□□ 1.77
EFCAB11-202ENST00000538485 ADAMTS8Q9UP79 889 aa26.11■■□□□ 1.77
EFCAB11-202ENST00000538485 POLKQ9UBT6 870 aa26.11■■□□□ 1.77
EFCAB11-202ENST00000538485 AATKQ6ZMQ8 1374 aa26.1■■□□□ 1.77
EFCAB11-202ENST00000538485 WDR43Q15061 677 aaKnown RBP eCLIP26.1■■□□□ 1.77
EFCAB11-202ENST00000538485 USP31Q70CQ4 1352 aa26.1■■□□□ 1.77
EFCAB11-202ENST00000538485 XPCQ01831 940 aaPredicted RBP26.09■■□□□ 1.77
EFCAB11-202ENST00000538485 ABTB2Q8N961 1025 aa26.09■■□□□ 1.77
EFCAB11-202ENST00000538485 CFAP53Q96M91 514 aa26.08■■□□□ 1.77
EFCAB11-202ENST00000538485 SHPRHQ149N8 1683 aa26.07■■□□□ 1.76
EFCAB11-202ENST00000538485 NLRP6P59044 892 aa26.07■■□□□ 1.76
EFCAB11-202ENST00000538485 LTBP4Q8N2S1 1624 aa26.07■■□□□ 1.76
EFCAB11-202ENST00000538485 NUTM2GQ5VZR2 741 aa26.06■■□□□ 1.76
EFCAB11-202ENST00000538485 SLAIN2Q9P270 581 aa26.06■■□□□ 1.76
EFCAB11-202ENST00000538485 EMILIN1Q9Y6C2 1016 aa26.06■■□□□ 1.76
EFCAB11-202ENST00000538485 PNPLA6Q8IY17 1366 aa26.05■■□□□ 1.76
EFCAB11-202ENST00000538485 RRS1Q15050 365 aaKnown RBP26.05■■□□□ 1.76
EFCAB11-202ENST00000538485 KRT28Q7Z3Y7 464 aa26.05■■□□□ 1.76
EFCAB11-202ENST00000538485 INSRP06213 1382 aa26.05■■□□□ 1.76
EFCAB11-202ENST00000538485 MARF1Q9Y4F3 1742 aaKnown RBP26.05■■□□□ 1.76
EFCAB11-202ENST00000538485 PPM1GO15355 546 aaPredicted RBP26.04■■□□□ 1.76
EFCAB11-202ENST00000538485 COL3A1P02461 1466 aaPredicted RBP26.04■■□□□ 1.76
EFCAB11-202ENST00000538485 AEBP2Q6ZN18 517 aaPredicted RBP26.04■■□□□ 1.76
EFCAB11-202ENST00000538485 DDX17Q92841 729 aaKnown RBP26.04■■□□□ 1.76
EFCAB11-202ENST00000538485 SMG6Q86US8 1419 aaKnown RBP26.03■■□□□ 1.76
EFCAB11-202ENST00000538485 USP54Q70EL1 1684 aa26.03■■□□□ 1.76
EFCAB11-202ENST00000538485 TRPM3Q9HCF6 1732 aaPredicted RBP26.03■■□□□ 1.76
EFCAB11-202ENST00000538485 BLMP54132 1417 aaPredicted RBP26.03■■□□□ 1.76
EFCAB11-202ENST00000538485 SENP3-EIF4A1A0A087X0R7 540 aa26.02■■□□□ 1.76
EFCAB11-202ENST00000538485 BRINP3Q76B58 766 aa26.02■■□□□ 1.76
EFCAB11-202ENST00000538485 SOX12O15370 315 aa26.02■■□□□ 1.76
EFCAB11-202ENST00000538485 NPHP3Q7Z494 1330 aa26■■□□□ 1.75
EFCAB11-202ENST00000538485 ZBED9Q6R2W3 1325 aa25.99■■□□□ 1.75
EFCAB11-202ENST00000538485 CDK12Q9NYV4 1490 aaPredicted RBP25.98■■□□□ 1.75
EFCAB11-202ENST00000538485 DIAPH1O60610 1272 aaKnown RBP25.96■■□□□ 1.75
EFCAB11-202ENST00000538485 LMOD2Q6P5Q4 547 aa25.95■■□□□ 1.74
EFCAB11-202ENST00000538485 PXDNQ92626 1479 aa25.95■■□□□ 1.74
EFCAB11-202ENST00000538485 MAP3K19Q56UN5 1328 aa25.94■■□□□ 1.74
EFCAB11-202ENST00000538485 CCDC146Q8IYE0 955 aa25.94■■□□□ 1.74
EFCAB11-202ENST00000538485 NUDCQ9Y266 331 aa25.94■■□□□ 1.74
EFCAB11-202ENST00000538485 ALS2Q96Q42 1657 aa25.94■■□□□ 1.74
EFCAB11-202ENST00000538485 PEAK1Q9H792 1746 aa25.93■■□□□ 1.74
EFCAB11-202ENST00000538485 U2AF1L5P0DN76 240 aaPredicted RBP25.93■■□□□ 1.74
EFCAB11-202ENST00000538485 U2AF1Q01081 240 aaKnown RBP eCLIP25.93■■□□□ 1.74
EFCAB11-202ENST00000538485 SBNO1A3KN83 1393 aa25.92■■□□□ 1.74
EFCAB11-202ENST00000538485 U2SURPO15042 1029 aaKnown RBP25.91■■□□□ 1.74
EFCAB11-202ENST00000538485 IL13P35225 146 aa25.89■■□□□ 1.74
EFCAB11-202ENST00000538485 SALL2Q9Y467 1007 aaPredicted RBP25.89■■□□□ 1.74
EFCAB11-202ENST00000538485 HSP90AB2PQ58FF8 381 aa25.89■■□□□ 1.73
EFCAB11-202ENST00000538485 NFAT5O94916 1531 aa25.88■■□□□ 1.73
EFCAB11-202ENST00000538485 TNS3Q68CZ2 1445 aa25.88■■□□□ 1.73
EFCAB11-202ENST00000538485 KCNH5Q8NCM2 988 aa25.87■■□□□ 1.73
EFCAB11-202ENST00000538485 USP19O94966 1318 aa25.87■■□□□ 1.73
EFCAB11-202ENST00000538485 SLIT3O75094 1523 aa25.87■■□□□ 1.73
EFCAB11-202ENST00000538485 PLEKHG5O94827 1062 aa25.87■■□□□ 1.73
EFCAB11-202ENST00000538485 SOS2Q07890 1332 aaPredicted RBP25.87■■□□□ 1.73
EFCAB11-202ENST00000538485 SPATA31A3Q5VYP0 1347 aa25.87■■□□□ 1.73
EFCAB11-202ENST00000538485 FLT4P35916 1363 aa25.87■■□□□ 1.73
EFCAB11-202ENST00000538485 GCP02774 474 aa25.86■■□□□ 1.73
EFCAB11-202ENST00000538485 APAF1O14727 1248 aa25.85■■□□□ 1.73
EFCAB11-202ENST00000538485 AMPHP49418 695 aa25.85■■□□□ 1.73
EFCAB11-202ENST00000538485 EIF4A2Q14240 407 aaKnown RBP25.84■■□□□ 1.73
EFCAB11-202ENST00000538485 RUNDC1Q96C34 613 aa25.84■■□□□ 1.73
EFCAB11-202ENST00000538485 KIF24Q5T7B8 1368 aa25.84■■□□□ 1.73
EFCAB11-202ENST00000538485 LTN1O94822 1766 aa25.84■■□□□ 1.73
EFCAB11-202ENST00000538485 NHSL1Q5SYE7 1610 aa25.83■■□□□ 1.73
EFCAB11-202ENST00000538485 MED1Q15648 1581 aaPredicted RBP25.83■■□□□ 1.73
EFCAB11-202ENST00000538485 HOXC9P31274 260 aa25.82■■□□□ 1.72
EFCAB11-202ENST00000538485 PLEKHF1Q96S99 279 aa25.81■■□□□ 1.72
EFCAB11-202ENST00000538485 ROBO1Q9Y6N7 1651 aa25.8■■□□□ 1.72
EFCAB11-202ENST00000538485 ARHGEF10O15013 1369 aa25.8■■□□□ 1.72
EFCAB11-202ENST00000538485 FCHSD2O94868 740 aa25.79■■□□□ 1.72
EFCAB11-202ENST00000538485 HMOX1P09601 288 aa25.79■■□□□ 1.72
EFCAB11-202ENST00000538485 ARHGEF25Q86VW2 580 aa25.79■■□□□ 1.72
EFCAB11-202ENST00000538485 RTL1A6NKG5 1358 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms