RNA–Protein interactions for RNA: ENST00000538451.1

LDHA-216, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,345 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-216ENST00000538451 CCER2I3L3R5 266 aa13.69□□□□□ -0.22
LDHA-216ENST00000538451 CAPN15O75808 1086 aa13.69□□□□□ -0.22
LDHA-216ENST00000538451 PRKRIP1Q9H875 184 aaPredicted RBP13.69□□□□□ -0.22
LDHA-216ENST00000538451 NSD2O96028 1365 aa13.69□□□□□ -0.22
LDHA-216ENST00000538451 SAMD1Q6SPF0 538 aaPredicted RBP13.68□□□□□ -0.22
LDHA-216ENST00000538451 NGDNQ8NEJ9 315 aaKnown RBP13.68□□□□□ -0.22
LDHA-216ENST00000538451 NUTM2FA1L443 756 aa13.67□□□□□ -0.22
LDHA-216ENST00000538451 NSD3Q9BZ95 1437 aa13.67□□□□□ -0.22
LDHA-216ENST00000538451 MED1Q15648 1581 aaPredicted RBP13.67□□□□□ -0.22
LDHA-216ENST00000538451 NALCNQ8IZF0 1738 aa13.67□□□□□ -0.22
LDHA-216ENST00000538451 A0A1W2PP64 1363 aa13.67□□□□□ -0.22
LDHA-216ENST00000538451 FMN2Q9NZ56 1722 aa13.66□□□□□ -0.22
LDHA-216ENST00000538451 BRD4O60885 1362 aaPredicted RBP13.66□□□□□ -0.22
LDHA-216ENST00000538451 MST1RQ04912 1400 aa13.66□□□□□ -0.22
LDHA-216ENST00000538451 EDC4Q6P2E9 1401 aaKnown RBP13.66□□□□□ -0.22
LDHA-216ENST00000538451 ESCO1Q5FWF5 840 aa13.65□□□□□ -0.22
LDHA-216ENST00000538451 CC2D1BQ5T0F9 858 aaKnown RBP13.65□□□□□ -0.22
LDHA-216ENST00000538451 PHF8Q9UPP1 1060 aa13.65□□□□□ -0.22
LDHA-216ENST00000538451 ACEP12821 1306 aa13.65□□□□□ -0.22
LDHA-216ENST00000538451 PRR36Q9H6K5 1346 aa13.65□□□□□ -0.22
LDHA-216ENST00000538451 CNGB1Q14028 1251 aaPredicted RBP13.64□□□□□ -0.23
LDHA-216ENST00000538451 BRINP3Q76B58 766 aa13.64□□□□□ -0.23
LDHA-216ENST00000538451 MORC1Q86VD1 984 aa13.64□□□□□ -0.23
LDHA-216ENST00000538451 CARD14Q9BXL6 1004 aa13.64□□□□□ -0.23
LDHA-216ENST00000538451 PHLPP1O60346 1717 aa13.64□□□□□ -0.23
LDHA-216ENST00000538451 MYBBP1AQ9BQG0 1328 aaKnown RBP13.64□□□□□ -0.23
LDHA-216ENST00000538451 CPSF1Q10570 1443 aaKnown RBP13.64□□□□□ -0.23
LDHA-216ENST00000538451 JCADQ9P266 1359 aa13.63□□□□□ -0.23
LDHA-216ENST00000538451 TTC21AQ8NDW8 1320 aa13.63□□□□□ -0.23
LDHA-216ENST00000538451 AHDC1Q5TGY3 1603 aaPredicted RBP13.63□□□□□ -0.23
LDHA-216ENST00000538451 USP32Q8NFA0 1604 aa13.63□□□□□ -0.23
LDHA-216ENST00000538451 PSME1Q06323 249 aa13.63□□□□□ -0.23
LDHA-216ENST00000538451 PMFBP1Q8TBY8 1022 aa13.63□□□□□ -0.23
LDHA-216ENST00000538451 POLR3AO14802 1390 aaPredicted RBP13.63□□□□□ -0.23
LDHA-216ENST00000538451 TOPAZ1Q8N9V7 1692 aa13.62□□□□□ -0.23
LDHA-216ENST00000538451 PARD3Q8TEW0 1356 aa13.62□□□□□ -0.23
LDHA-216ENST00000538451 POTEHQ6S545 545 aa13.62□□□□□ -0.23
LDHA-216ENST00000538451 NLRP13Q86W25 1043 aa13.62□□□□□ -0.23
LDHA-216ENST00000538451 C1orf167Q5SNV9 1468 aa13.61□□□□□ -0.23
LDHA-216ENST00000538451 CD163L1Q9NR16 1453 aa13.61□□□□□ -0.23
LDHA-216ENST00000538451 COL16A1Q07092 1604 aaPredicted RBP13.61□□□□□ -0.23
LDHA-216ENST00000538451 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.6□□□□□ -0.23
LDHA-216ENST00000538451 COG3Q96JB2 828 aa13.6□□□□□ -0.23
LDHA-216ENST00000538451 USP6P35125 1406 aa13.59□□□□□ -0.23
LDHA-216ENST00000538451 KIF1AQ12756 1690 aa13.59□□□□□ -0.23
LDHA-216ENST00000538451 MRS2Q9HD23 443 aa13.59□□□□□ -0.23
LDHA-216ENST00000538451 SPATA31A6Q5VVP1 1343 aa13.58□□□□□ -0.23
LDHA-216ENST00000538451 NPHP3Q7Z494 1330 aa13.58□□□□□ -0.23
LDHA-216ENST00000538451 AKAP12Q02952 1782 aa13.58□□□□□ -0.24
LDHA-216ENST00000538451 FYB1O15117 783 aa13.58□□□□□ -0.24
LDHA-216ENST00000538451 PAK3O75914 559 aaPredicted RBP13.58□□□□□ -0.24
LDHA-216ENST00000538451 ILDR2Q71H61 639 aa13.58□□□□□ -0.24
LDHA-216ENST00000538451 TTC21BQ7Z4L5 1316 aa13.57□□□□□ -0.24
LDHA-216ENST00000538451 MON2Q7Z3U7 1717 aa13.57□□□□□ -0.24
LDHA-216ENST00000538451 LRRC59Q96AG4 307 aaKnown RBP13.57□□□□□ -0.24
LDHA-216ENST00000538451 CFAP53Q96M91 514 aa13.57□□□□□ -0.24
LDHA-216ENST00000538451 GGNBP2Q9H3C7 697 aa13.57□□□□□ -0.24
LDHA-216ENST00000538451 NHSL1Q5SYE7 1610 aa13.57□□□□□ -0.24
LDHA-216ENST00000538451 ORAI2Q96SN7 254 aa13.56□□□□□ -0.24
LDHA-216ENST00000538451 RGPD8O14715 1765 aaPredicted RBP13.55□□□□□ -0.24
LDHA-216ENST00000538451 FOXO3O43524 673 aa13.55□□□□□ -0.24
LDHA-216ENST00000538451 PPP2R1AP30153 589 aa13.55□□□□□ -0.24
LDHA-216ENST00000538451 KIF20BQ96Q89 1820 aa13.54□□□□□ -0.24
LDHA-216ENST00000538451 KRT28Q7Z3Y7 464 aa13.54□□□□□ -0.24
LDHA-216ENST00000538451 ABTB2Q8N961 1025 aa13.54□□□□□ -0.24
LDHA-216ENST00000538451 ZNF219Q9P2Y4 722 aaPredicted RBP13.54□□□□□ -0.24
LDHA-216ENST00000538451 SHPRHQ149N8 1683 aa13.54□□□□□ -0.24
LDHA-216ENST00000538451 NLRP6P59044 892 aa13.53□□□□□ -0.24
LDHA-216ENST00000538451 DDX17Q92841 729 aaKnown RBP13.53□□□□□ -0.24
LDHA-216ENST00000538451 ANKRD26Q9UPS8 1709 aa13.52□□□□□ -0.25
LDHA-216ENST00000538451 TNNT2P45379 298 aaPredicted RBP13.52□□□□□ -0.25
LDHA-216ENST00000538451 MEX3CQ5U5Q3 659 aaKnown RBP13.52□□□□□ -0.25
LDHA-216ENST00000538451 NME9Q86XW9 330 aa13.52□□□□□ -0.25
LDHA-216ENST00000538451 SOS2Q07890 1332 aaPredicted RBP13.52□□□□□ -0.25
LDHA-216ENST00000538451 KCNH5Q8NCM2 988 aa13.51□□□□□ -0.25
LDHA-216ENST00000538451 USP31Q70CQ4 1352 aa13.51□□□□□ -0.25
LDHA-216ENST00000538451 SSH2Q76I76 1423 aa13.51□□□□□ -0.25
LDHA-216ENST00000538451 SOCS7O14512 581 aa13.5□□□□□ -0.25
LDHA-216ENST00000538451 WDR43Q15061 677 aaKnown RBP eCLIP13.5□□□□□ -0.255e-7■□□□□ 10.4
LDHA-216ENST00000538451 NUDCQ9Y266 331 aa13.5□□□□□ -0.25
LDHA-216ENST00000538451 SBNO1A3KN83 1393 aa13.5□□□□□ -0.25
LDHA-216ENST00000538451 AATKQ6ZMQ8 1374 aa13.5□□□□□ -0.25
LDHA-216ENST00000538451 NRKQ7Z2Y5 1582 aa13.5□□□□□ -0.25
LDHA-216ENST00000538451 NUTM2BA6NNL0 878 aaPredicted RBP13.49□□□□□ -0.25
LDHA-216ENST00000538451 NUTM2EB1AL46 878 aaPredicted RBP13.49□□□□□ -0.25
LDHA-216ENST00000538451 LMOD2Q6P5Q4 547 aa13.49□□□□□ -0.25
LDHA-216ENST00000538451 NUTM2AQ8IVF1 878 aaPredicted RBP13.49□□□□□ -0.25
LDHA-216ENST00000538451 RGS17Q9UGC6 210 aaPredicted RBP13.49□□□□□ -0.25
LDHA-216ENST00000538451 LRP6O75581 1613 aa13.48□□□□□ -0.25
LDHA-216ENST00000538451 ARHGEF10O15013 1369 aa13.48□□□□□ -0.25
LDHA-216ENST00000538451 PNPLA6Q8IY17 1366 aa13.48□□□□□ -0.25
LDHA-216ENST00000538451 MTHFSP49914 203 aa13.48□□□□□ -0.25
LDHA-216ENST00000538451 FAM9BQ8IZU0 186 aa13.47□□□□□ -0.25
LDHA-216ENST00000538451 OVOS2A0A0J9YW53 1432 aa13.47□□□□□ -0.25
LDHA-216ENST00000538451 OVOS2Q6IE36 1432 aa13.47□□□□□ -0.25
LDHA-216ENST00000538451 ZNF772Q68DY9 489 aaPredicted RBP13.46□□□□□ -0.25
LDHA-216ENST00000538451 PNNQ9H307 717 aaKnown RBP13.46□□□□□ -0.25
LDHA-216ENST00000538451 PPM1GO15355 546 aaPredicted RBP13.45□□□□□ -0.26
LDHA-216ENST00000538451 XPCQ01831 940 aaPredicted RBP13.45□□□□□ -0.26
LDHA-216ENST00000538451 PNISRQ8TF01 805 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms