RNA–Protein interactions for RNA: ENST00000538410.5

COPS7A-208, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3 BASIC

Gene COPS7A, Length 1,610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-208ENST00000538410 PRKRIP1Q9H875 184 aaPredicted RBP28.13■■■□□ 2.09
COPS7A-208ENST00000538410 ANKARQ7Z5J8 1434 aa28.12■■■□□ 2.09
COPS7A-208ENST00000538410 FOXO3O43524 673 aa28.11■■■□□ 2.09
COPS7A-208ENST00000538410 TERF2IPQ9NYB0 399 aa28.11■■■□□ 2.09
COPS7A-208ENST00000538410 A0A1W2PP64 1363 aa28.11■■■□□ 2.09
COPS7A-208ENST00000538410 NSD3Q9BZ95 1437 aa28.1■■■□□ 2.09
COPS7A-208ENST00000538410 MON2Q7Z3U7 1717 aa28.09■■■□□ 2.09
COPS7A-208ENST00000538410 KIF1AQ12756 1690 aa28.08■■■□□ 2.09
COPS7A-208ENST00000538410 HDGFL2Q7Z4V5 671 aaPredicted RBP28.07■■■□□ 2.08
COPS7A-208ENST00000538410 KTN1Q86UP2 1357 aaKnown RBP28.07■■■□□ 2.08
COPS7A-208ENST00000538410 AMER1Q5JTC6 1135 aaPredicted RBP28.07■■■□□ 2.08
COPS7A-208ENST00000538410 ZNF772Q68DY9 489 aaPredicted RBP28.07■■■□□ 2.08
COPS7A-208ENST00000538410 PXDNQ92626 1479 aa28.07■■■□□ 2.08
COPS7A-208ENST00000538410 NPC1L1Q9UHC9 1359 aa28.06■■■□□ 2.08
COPS7A-208ENST00000538410 CPSF1Q10570 1443 aaKnown RBP28.06■■■□□ 2.08
COPS7A-208ENST00000538410 XPCQ01831 940 aaPredicted RBP28.06■■■□□ 2.08
COPS7A-208ENST00000538410 CNGB1Q14028 1251 aaPredicted RBP28.05■■■□□ 2.08
COPS7A-208ENST00000538410 PLEKHG3A1L390 1219 aa28.04■■■□□ 2.08
COPS7A-208ENST00000538410 CC2D1BQ5T0F9 858 aaKnown RBP28.03■■■□□ 2.08
COPS7A-208ENST00000538410 PHF8Q9UPP1 1060 aa28.03■■■□□ 2.08
COPS7A-208ENST00000538410 PARD3Q8TEW0 1356 aa28.03■■■□□ 2.08
COPS7A-208ENST00000538410 KIF20BQ96Q89 1820 aa28.02■■■□□ 2.08
COPS7A-208ENST00000538410 RALBP1Q15311 655 aa28.02■■■□□ 2.08
COPS7A-208ENST00000538410 COL22A1Q8NFW1 1626 aaPredicted RBP28.02■■■□□ 2.08
COPS7A-208ENST00000538410 CCER2I3L3R5 266 aa28.01■■■□□ 2.07
COPS7A-208ENST00000538410 C8orf37Q96NL8 207 aa28■■■□□ 2.07
COPS7A-208ENST00000538410 AFF2P51816 1311 aa28■■■□□ 2.07
COPS7A-208ENST00000538410 ANKRD26Q9UPS8 1709 aa27.99■■■□□ 2.07
COPS7A-208ENST00000538410 ADAMTS2O95450 1211 aa27.99■■■□□ 2.07
COPS7A-208ENST00000538410 CGNL1Q0VF96 1302 aa27.98■■■□□ 2.07
COPS7A-208ENST00000538410 KRT28Q7Z3Y7 464 aa27.98■■■□□ 2.07
COPS7A-208ENST00000538410 ZNF692Q9BU19 519 aaPredicted RBP27.98■■■□□ 2.07
COPS7A-208ENST00000538410 ACEP12821 1306 aa27.97■■■□□ 2.07
COPS7A-208ENST00000538410 NRKQ7Z2Y5 1582 aa27.97■■■□□ 2.07
COPS7A-208ENST00000538410 EDC4Q6P2E9 1401 aaKnown RBP27.96■■■□□ 2.07
COPS7A-208ENST00000538410 POLR3AO14802 1390 aaPredicted RBP27.96■■■□□ 2.07
COPS7A-208ENST00000538410 PSME1Q06323 249 aa27.95■■■□□ 2.06
COPS7A-208ENST00000538410 PMFBP1Q8TBY8 1022 aa27.95■■■□□ 2.06
COPS7A-208ENST00000538410 NSD2O96028 1365 aa27.95■■■□□ 2.06
COPS7A-208ENST00000538410 NGLY1Q96IV0 654 aa27.94■■■□□ 2.06
COPS7A-208ENST00000538410 SPATA31A3Q5VYP0 1347 aa27.94■■■□□ 2.06
COPS7A-208ENST00000538410 MYBBP1AQ9BQG0 1328 aaKnown RBP27.93■■■□□ 2.06
COPS7A-208ENST00000538410 USP6P35125 1406 aa27.91■■■□□ 2.06
COPS7A-208ENST00000538410 NGDNQ8NEJ9 315 aaKnown RBP27.91■■■□□ 2.06
COPS7A-208ENST00000538410 RXRBP28702 533 aa27.9■■■□□ 2.06
COPS7A-208ENST00000538410 MARF1Q9Y4F3 1742 aaKnown RBP27.89■■■□□ 2.06
COPS7A-208ENST00000538410 FYB1O15117 783 aa27.88■■■□□ 2.05
COPS7A-208ENST00000538410 TNS3Q68CZ2 1445 aa27.87■■■□□ 2.05
COPS7A-208ENST00000538410 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.87■■■□□ 2.05
COPS7A-208ENST00000538410 SBNO1A3KN83 1393 aa27.87■■■□□ 2.05
COPS7A-208ENST00000538410 SSH2Q76I76 1423 aa27.86■■■□□ 2.05
COPS7A-208ENST00000538410 QTRT2Q9H974 415 aaKnown RBP27.86■■■□□ 2.05
COPS7A-208ENST00000538410 MORC1Q86VD1 984 aa27.85■■■□□ 2.05
COPS7A-208ENST00000538410 CCDC184Q52MB2 194 aa27.84■■■□□ 2.05
COPS7A-208ENST00000538410 GGNBP2Q9H3C7 697 aa27.84■■■□□ 2.05
COPS7A-208ENST00000538410 USP21Q9UK80 565 aa27.84■■■□□ 2.05
COPS7A-208ENST00000538410 TTC21BQ7Z4L5 1316 aa27.84■■■□□ 2.05
COPS7A-208ENST00000538410 LMOD2Q6P5Q4 547 aa27.83■■■□□ 2.05
COPS7A-208ENST00000538410 PPP2R1AP30153 589 aa27.82■■■□□ 2.04
COPS7A-208ENST00000538410 NLRP13Q86W25 1043 aa27.82■■■□□ 2.04
COPS7A-208ENST00000538410 FNBP4Q8N3X1 1017 aaPredicted RBP27.82■■■□□ 2.04
COPS7A-208ENST00000538410 BRD4O60885 1362 aaPredicted RBP27.82■■■□□ 2.04
COPS7A-208ENST00000538410 ARHGEF10O15013 1369 aa27.81■■■□□ 2.04
COPS7A-208ENST00000538410 TTC21AQ8NDW8 1320 aa27.81■■■□□ 2.04
COPS7A-208ENST00000538410 RBM6P78332 1123 aaKnown RBP27.81■■■□□ 2.04
COPS7A-208ENST00000538410 MRS2Q9HD23 443 aa27.81■■■□□ 2.04
COPS7A-208ENST00000538410 TRPM3Q9HCF6 1732 aaPredicted RBP27.8■■■□□ 2.04
COPS7A-208ENST00000538410 HAP1P54257 671 aaPredicted RBP27.8■■■□□ 2.04
COPS7A-208ENST00000538410 CDK12Q9NYV4 1490 aaPredicted RBP27.79■■■□□ 2.04
COPS7A-208ENST00000538410 NME9Q86XW9 330 aa27.79■■■□□ 2.04
COPS7A-208ENST00000538410 PIK3C2AO00443 1686 aa27.78■■■□□ 2.04
COPS7A-208ENST00000538410 TRPC5Q9UL62 973 aaPredicted RBP27.78■■■□□ 2.04
COPS7A-208ENST00000538410 PLEKHG5O94827 1062 aa27.77■■■□□ 2.04
COPS7A-208ENST00000538410 CABLES1Q8TDN4 633 aa27.77■■■□□ 2.04
COPS7A-208ENST00000538410 USP54Q70EL1 1684 aa27.76■■■□□ 2.03
COPS7A-208ENST00000538410 MAP2P11137 1827 aaKnown RBP27.75■■■□□ 2.03
COPS7A-208ENST00000538410 ALS2Q96Q42 1657 aa27.74■■■□□ 2.03
COPS7A-208ENST00000538410 ABCA3Q99758 1704 aa27.74■■■□□ 2.03
COPS7A-208ENST00000538410 TNNT2P45379 298 aaPredicted RBP27.74■■■□□ 2.03
COPS7A-208ENST00000538410 ZRANB1Q9UGI0 708 aa27.74■■■□□ 2.03
COPS7A-208ENST00000538410 BCL9LQ86UU0 1499 aa27.73■■■□□ 2.03
COPS7A-208ENST00000538410 OVOS2A0A0J9YW53 1432 aa27.72■■■□□ 2.03
COPS7A-208ENST00000538410 OVOS2Q6IE36 1432 aa27.72■■■□□ 2.03
COPS7A-208ENST00000538410 PAK3O75914 559 aaPredicted RBP27.72■■■□□ 2.03
COPS7A-208ENST00000538410 COG3Q96JB2 828 aa27.72■■■□□ 2.03
COPS7A-208ENST00000538410 ATRNO75882 1429 aa27.72■■■□□ 2.03
COPS7A-208ENST00000538410 USP31Q70CQ4 1352 aa27.71■■■□□ 2.03
COPS7A-208ENST00000538410 RGS12O14924 1447 aa27.69■■■□□ 2.02
COPS7A-208ENST00000538410 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.69■■■□□ 2.02
COPS7A-208ENST00000538410 SLIT2O94813 1529 aa27.68■■■□□ 2.02
COPS7A-208ENST00000538410 UNC5CLQ8IV45 518 aa27.67■■■□□ 2.02
COPS7A-208ENST00000538410 PNISRQ8TF01 805 aaKnown RBP27.65■■■□□ 2.02
COPS7A-208ENST00000538410 ABTB2Q8N961 1025 aa27.64■■■□□ 2.02
COPS7A-208ENST00000538410 PLCH1Q4KWH8 1693 aa27.64■■■□□ 2.02
COPS7A-208ENST00000538410 AATKQ6ZMQ8 1374 aa27.64■■■□□ 2.02
COPS7A-208ENST00000538410 NWD2Q9ULI1 1742 aa27.63■■■□□ 2.01
COPS7A-208ENST00000538410 MTHFSP49914 203 aa27.63■■■□□ 2.01
COPS7A-208ENST00000538410 NLRP6P59044 892 aa27.63■■■□□ 2.01
COPS7A-208ENST00000538410 FAM9BQ8IZU0 186 aa27.63■■■□□ 2.01
COPS7A-208ENST00000538410 GJD4Q96KN9 370 aaPredicted RBP27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms