RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 C1orf167Q5SNV9 1468 aa15.88■□□□□ 0.13
SPARC-207ENST00000537849 NME9Q86XW9 330 aa15.87■□□□□ 0.13
SPARC-207ENST00000537849 ZRANB1Q9UGI0 708 aa15.87■□□□□ 0.13
SPARC-207ENST00000537849 MSH6P52701 1360 aa15.87■□□□□ 0.13
SPARC-207ENST00000537849 MST1RQ04912 1400 aa15.86■□□□□ 0.13
SPARC-207ENST00000537849 KIF20BQ96Q89 1820 aa15.86■□□□□ 0.13
SPARC-207ENST00000537849 ANKRD26Q9UPS8 1709 aa15.85■□□□□ 0.13
SPARC-207ENST00000537849 PNISRQ8TF01 805 aaKnown RBP15.85■□□□□ 0.13
SPARC-207ENST00000537849 LTBP4Q8N2S1 1624 aa15.84■□□□□ 0.13
SPARC-207ENST00000537849 TTC21AQ8NDW8 1320 aa15.84■□□□□ 0.13
SPARC-207ENST00000537849 NRKQ7Z2Y5 1582 aa15.83■□□□□ 0.13
SPARC-207ENST00000537849 FOXO3O43524 673 aa15.82■□□□□ 0.12
SPARC-207ENST00000537849 TNNT2P45379 298 aaPredicted RBP15.82■□□□□ 0.12
SPARC-207ENST00000537849 PSME1Q06323 249 aa15.82■□□□□ 0.12
SPARC-207ENST00000537849 SCAF1Q9H7N4 1312 aaKnown RBP15.81■□□□□ 0.12
SPARC-207ENST00000537849 SLAIN2Q9P270 581 aa15.81■□□□□ 0.12
SPARC-207ENST00000537849 MAP2P11137 1827 aaKnown RBP15.8■□□□□ 0.12
SPARC-207ENST00000537849 USP31Q70CQ4 1352 aa15.8■□□□□ 0.12
SPARC-207ENST00000537849 FBLN1P23142 703 aa15.8■□□□□ 0.12
SPARC-207ENST00000537849 MTHFSP49914 203 aa15.8■□□□□ 0.12
SPARC-207ENST00000537849 COG3Q96JB2 828 aa15.8■□□□□ 0.12
SPARC-207ENST00000537849 KRT28Q7Z3Y7 464 aa15.79■□□□□ 0.12
SPARC-207ENST00000537849 FAM9BQ8IZU0 186 aa15.79■□□□□ 0.12
SPARC-207ENST00000537849 YTHDC1Q96MU7 727 aaKnown RBP15.78■□□□□ 0.12
SPARC-207ENST00000537849 KIF1AQ12756 1690 aa15.78■□□□□ 0.12
SPARC-207ENST00000537849 BRINP3Q76B58 766 aa15.77■□□□□ 0.12
SPARC-207ENST00000537849 POLKQ9UBT6 870 aa15.77■□□□□ 0.12
SPARC-207ENST00000537849 OVOS2A0A0J9YW53 1432 aa15.77■□□□□ 0.11
SPARC-207ENST00000537849 OVOS2Q6IE36 1432 aa15.77■□□□□ 0.11
SPARC-207ENST00000537849 PAK3O75914 559 aaPredicted RBP15.76■□□□□ 0.11
SPARC-207ENST00000537849 ABTB2Q8N961 1025 aa15.76■□□□□ 0.11
SPARC-207ENST00000537849 PIK3C2AO00443 1686 aa15.76■□□□□ 0.11
SPARC-207ENST00000537849 AATKQ6ZMQ8 1374 aa15.75■□□□□ 0.11
SPARC-207ENST00000537849 NLRP6P59044 892 aa15.75■□□□□ 0.11
SPARC-207ENST00000537849 XPCQ01831 940 aaPredicted RBP15.75■□□□□ 0.11
SPARC-207ENST00000537849 DDX17Q92841 729 aaKnown RBP15.75■□□□□ 0.11
SPARC-207ENST00000537849 TRPM3Q9HCF6 1732 aaPredicted RBP15.74■□□□□ 0.11
SPARC-207ENST00000537849 MARF1Q9Y4F3 1742 aaKnown RBP15.74■□□□□ 0.11
SPARC-207ENST00000537849 INSRP06213 1382 aa15.74■□□□□ 0.11
SPARC-207ENST00000537849 USP54Q70EL1 1684 aa15.73■□□□□ 0.11
SPARC-207ENST00000537849 NUTM2GQ5VZR2 741 aa15.73■□□□□ 0.11
SPARC-207ENST00000537849 PNPLA6Q8IY17 1366 aa15.73■□□□□ 0.11
SPARC-207ENST00000537849 NPHP3Q7Z494 1330 aa15.72■□□□□ 0.11
SPARC-207ENST00000537849 ADAMTS8Q9UP79 889 aa15.72■□□□□ 0.11
SPARC-207ENST00000537849 CFAP53Q96M91 514 aa15.71■□□□□ 0.11
SPARC-207ENST00000537849 EMILIN1Q9Y6C2 1016 aa15.71■□□□□ 0.11
SPARC-207ENST00000537849 SBNO1A3KN83 1393 aa15.71■□□□□ 0.11
SPARC-207ENST00000537849 RRS1Q15050 365 aaKnown RBP15.7■□□□□ 0.1
SPARC-207ENST00000537849 PXDNQ92626 1479 aa15.7■□□□□ 0.1
SPARC-207ENST00000537849 ALS2Q96Q42 1657 aa15.69■□□□□ 0.1
SPARC-207ENST00000537849 SOS2Q07890 1332 aaPredicted RBP15.68■□□□□ 0.1
SPARC-207ENST00000537849 SMG6Q86US8 1419 aaKnown RBP15.68■□□□□ 0.1
SPARC-207ENST00000537849 COL3A1P02461 1466 aaPredicted RBP15.68■□□□□ 0.1
SPARC-207ENST00000537849 SPATA31A3Q5VYP0 1347 aa15.68■□□□□ 0.1
SPARC-207ENST00000537849 SHPRHQ149N8 1683 aa15.67■□□□□ 0.1
SPARC-207ENST00000537849 WDR43Q15061 677 aaKnown RBP eCLIP15.67■□□□□ 0.1
SPARC-207ENST00000537849 PPM1GO15355 546 aaPredicted RBP15.66■□□□□ 0.1
SPARC-207ENST00000537849 DIAPH1O60610 1272 aaKnown RBP15.66■□□□□ 0.1
SPARC-207ENST00000537849 HNRNPUQ00839 825 aaKnown RBP eCLIP15.66■□□□□ 0.1
SPARC-207ENST00000537849 USP19O94966 1318 aa15.66■□□□□ 0.1
SPARC-207ENST00000537849 MAP3K19Q56UN5 1328 aa15.66■□□□□ 0.1
SPARC-207ENST00000537849 SOX12O15370 315 aa15.65■□□□□ 0.1
SPARC-207ENST00000537849 GCP02774 474 aa15.65■□□□□ 0.1
SPARC-207ENST00000537849 IL13P35225 146 aa15.65■□□□□ 0.1
SPARC-207ENST00000537849 LMOD2Q6P5Q4 547 aa15.65■□□□□ 0.1
SPARC-207ENST00000537849 NHSL1Q5SYE7 1610 aa15.65■□□□□ 0.1
SPARC-207ENST00000537849 KCNH5Q8NCM2 988 aa15.64■□□□□ 0.09
SPARC-207ENST00000537849 PEAK1Q9H792 1746 aa15.64■□□□□ 0.09
SPARC-207ENST00000537849 NUDCQ9Y266 331 aa15.64■□□□□ 0.09
SPARC-207ENST00000537849 CDK12Q9NYV4 1490 aaPredicted RBP15.64■□□□□ 0.09
SPARC-207ENST00000537849 SLIT3O75094 1523 aa15.63■□□□□ 0.09
SPARC-207ENST00000537849 NFAT5O94916 1531 aa15.63■□□□□ 0.09
SPARC-207ENST00000537849 BLMP54132 1417 aaPredicted RBP15.62■□□□□ 0.09
SPARC-207ENST00000537849 TNS3Q68CZ2 1445 aa15.62■□□□□ 0.09
SPARC-207ENST00000537849 TOM1O60784 492 aa15.62■□□□□ 0.09
SPARC-207ENST00000537849 HSP90AB2PQ58FF8 381 aa15.62■□□□□ 0.09
SPARC-207ENST00000537849 ARHGEF25Q86VW2 580 aa15.62■□□□□ 0.09
SPARC-207ENST00000537849 MED1Q15648 1581 aaPredicted RBP15.62■□□□□ 0.09
SPARC-207ENST00000537849 ROBO1Q9Y6N7 1651 aa15.61■□□□□ 0.09
SPARC-207ENST00000537849 CERKQ8TCT0 537 aa15.61■□□□□ 0.09
SPARC-207ENST00000537849 KIF24Q5T7B8 1368 aa15.61■□□□□ 0.09
SPARC-207ENST00000537849 U2AF1L5P0DN76 240 aaPredicted RBP15.6■□□□□ 0.09
SPARC-207ENST00000537849 AMPHP49418 695 aa15.6■□□□□ 0.09
SPARC-207ENST00000537849 U2AF1Q01081 240 aaKnown RBP eCLIP15.6■□□□□ 0.09
SPARC-207ENST00000537849 EIF4A2Q14240 407 aaKnown RBP15.6■□□□□ 0.09
SPARC-207ENST00000537849 IP6K1Q92551 441 aa15.6■□□□□ 0.09
SPARC-207ENST00000537849 ARHGEF10O15013 1369 aa15.6■□□□□ 0.09
SPARC-207ENST00000537849 IQSEC2Q5JU85 1478 aa15.59■□□□□ 0.09
SPARC-207ENST00000537849 U2SURPO15042 1029 aaKnown RBP15.59■□□□□ 0.09
SPARC-207ENST00000537849 HOXC9P31274 260 aa15.59■□□□□ 0.09
SPARC-207ENST00000537849 CABLES1Q8TDN4 633 aa15.59■□□□□ 0.09
SPARC-207ENST00000537849 FLT4P35916 1363 aa15.59■□□□□ 0.09
SPARC-207ENST00000537849 LTN1O94822 1766 aa15.59■□□□□ 0.09
SPARC-207ENST00000537849 SENP3-EIF4A1A0A087X0R7 540 aa15.58■□□□□ 0.08
SPARC-207ENST00000537849 UBAP1LF5GYI3 381 aa15.58■□□□□ 0.08
SPARC-207ENST00000537849 PLEKHG5O94827 1062 aa15.58■□□□□ 0.08
SPARC-207ENST00000537849 CENPBP07199 599 aaPredicted RBP15.58■□□□□ 0.08
SPARC-207ENST00000537849 CCDC146Q8IYE0 955 aa15.58■□□□□ 0.08
SPARC-207ENST00000537849 RUNDC1Q96C34 613 aa15.58■□□□□ 0.08
SPARC-207ENST00000537849 PLEKHF1Q96S99 279 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms