RNA–Protein interactions for RNA: ENST00000537194.6

SMAD3-203, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-203ENST00000537194 TULP4Q9NRJ4 1543 aa13□□□□□ -0.33
SMAD3-203ENST00000537194 ITSN1Q15811 1721 aa12.99□□□□□ -0.33
SMAD3-203ENST00000537194 HRCP23327 699 aa12.99□□□□□ -0.33
SMAD3-203ENST00000537194 ADGRB1O14514 1584 aa12.98□□□□□ -0.33
SMAD3-203ENST00000537194 TRPM3Q9HCF6 1732 aaPredicted RBP12.98□□□□□ -0.33
SMAD3-203ENST00000537194 ALS2Q96Q42 1657 aa12.97□□□□□ -0.33
SMAD3-203ENST00000537194 NUDT16Q96DE0 195 aaKnown RBP12.97□□□□□ -0.33
SMAD3-203ENST00000537194 SPATA31A5Q5VU36 1347 aa12.96□□□□□ -0.33
SMAD3-203ENST00000537194 SPATA31A7Q8IWB4 1347 aa12.96□□□□□ -0.33
SMAD3-203ENST00000537194 PRR36Q9H6K5 1346 aa12.96□□□□□ -0.33
SMAD3-203ENST00000537194 EVA1CP58658 441 aa12.96□□□□□ -0.33
SMAD3-203ENST00000537194 SRCAPQ6ZRS2 3230 aa12.95□□□□□ -0.34
SMAD3-203ENST00000537194 NRAPQ86VF7 1730 aa12.95□□□□□ -0.34
SMAD3-203ENST00000537194 ATP7BP35670 1465 aa12.94□□□□□ -0.34
SMAD3-203ENST00000537194 CDK19Q9BWU1 502 aa12.94□□□□□ -0.34
SMAD3-203ENST00000537194 STRN4Q9NRL3 753 aa12.94□□□□□ -0.34
SMAD3-203ENST00000537194 CCDC61Q9Y6R9 512 aa12.94□□□□□ -0.34
SMAD3-203ENST00000537194 RGPD1P0DJD0 1748 aa12.93□□□□□ -0.34
SMAD3-203ENST00000537194 ZC3H6P61129 1189 aaKnown RBP12.93□□□□□ -0.34
SMAD3-203ENST00000537194 FAM196AQ6ZSG2 479 aa12.93□□□□□ -0.34
SMAD3-203ENST00000537194 ARHGEF28Q8N1W1 1705 aaKnown RBP12.93□□□□□ -0.34
SMAD3-203ENST00000537194 PDE3BQ13370 1112 aa12.92□□□□□ -0.34
SMAD3-203ENST00000537194 ABTB2Q8N961 1025 aa12.92□□□□□ -0.34
SMAD3-203ENST00000537194 KIAA0232Q92628 1395 aa12.92□□□□□ -0.34
SMAD3-203ENST00000537194 PSDA5PKW4 1024 aaPredicted RBP12.91□□□□□ -0.34
SMAD3-203ENST00000537194 SRPK2P78362 688 aaKnown RBP12.91□□□□□ -0.34
SMAD3-203ENST00000537194 EN1Q05925 392 aaPredicted RBP12.91□□□□□ -0.34
SMAD3-203ENST00000537194 CHRNA2Q15822 529 aa12.91□□□□□ -0.34
SMAD3-203ENST00000537194 NBPF8Q3BBV2 869 aa12.91□□□□□ -0.34
SMAD3-203ENST00000537194 NUTM2GQ5VZR2 741 aa12.91□□□□□ -0.34
SMAD3-203ENST00000537194 ACEP12821 1306 aa12.9□□□□□ -0.34
SMAD3-203ENST00000537194 SPATA31A1Q5TZJ5 1347 aa12.9□□□□□ -0.34
SMAD3-203ENST00000537194 NLRP13Q86W25 1043 aa12.9□□□□□ -0.34
SMAD3-203ENST00000537194 USP35Q9P2H5 1018 aa12.9□□□□□ -0.34
SMAD3-203ENST00000537194 KIAA1210Q9ULL0 1709 aa12.9□□□□□ -0.34
SMAD3-203ENST00000537194 LRP5O75197 1615 aa12.89□□□□□ -0.35
SMAD3-203ENST00000537194 PLEKHG3A1L390 1219 aa12.89□□□□□ -0.35
SMAD3-203ENST00000537194 FAM182BQ5T319 152 aa12.89□□□□□ -0.35
SMAD3-203ENST00000537194 C11orf95C9JLR9 678 aaPredicted RBP12.88□□□□□ -0.35
SMAD3-203ENST00000537194 POLR3AO14802 1390 aaPredicted RBP12.88□□□□□ -0.35
SMAD3-203ENST00000537194 CRYBG1Q9Y4K1 1723 aa12.88□□□□□ -0.35
SMAD3-203ENST00000537194 TRIM37O94972 964 aa12.87□□□□□ -0.35
SMAD3-203ENST00000537194 APBA3O96018 575 aa12.87□□□□□ -0.35
SMAD3-203ENST00000537194 R3HDM1Q15032 1099 aaKnown RBP12.87□□□□□ -0.35
SMAD3-203ENST00000537194 NBPF14Q5TI25 921 aa12.87□□□□□ -0.35
SMAD3-203ENST00000537194 BARGINQ6ZT62 677 aa12.87□□□□□ -0.35
SMAD3-203ENST00000537194 TCP11L2Q8N4U5 519 aa12.87□□□□□ -0.35
SMAD3-203ENST00000537194 PHRF1Q9P1Y6 1649 aaKnown RBP12.87□□□□□ -0.35
SMAD3-203ENST00000537194 CENPJQ9HC77 1338 aaPredicted RBP12.87□□□□□ -0.35
SMAD3-203ENST00000537194 THSD7AQ9UPZ6 1657 aa12.86□□□□□ -0.35
SMAD3-203ENST00000537194 BRD4O60885 1362 aaPredicted RBP12.86□□□□□ -0.35
SMAD3-203ENST00000537194 PARD3Q8TEW0 1356 aa12.86□□□□□ -0.35
SMAD3-203ENST00000537194 THRAP3Q9Y2W1 955 aaKnown RBP12.86□□□□□ -0.35
SMAD3-203ENST00000537194 DISP2A7MBM2 1401 aa12.86□□□□□ -0.35
SMAD3-203ENST00000537194 ZBTB7CA1YPR0 619 aa12.85□□□□□ -0.35
SMAD3-203ENST00000537194 EZH2Q15910 746 aaKnown RBP12.85□□□□□ -0.35
SMAD3-203ENST00000537194 SSH2Q76I76 1423 aa12.85□□□□□ -0.35
SMAD3-203ENST00000537194 TOPAZ1Q8N9V7 1692 aa12.84□□□□□ -0.35
SMAD3-203ENST00000537194 GCP02774 474 aa12.84□□□□□ -0.35
SMAD3-203ENST00000537194 PPIP5K1Q6PFW1 1433 aa12.84□□□□□ -0.35
SMAD3-203ENST00000537194 CPDO75976 1380 aa12.83□□□□□ -0.36
SMAD3-203ENST00000537194 NLRP6P59044 892 aa12.83□□□□□ -0.36
SMAD3-203ENST00000537194 NBPF1Q3BBV0 1214 aa12.83□□□□□ -0.36
SMAD3-203ENST00000537194 LARP1Q6PKG0 1096 aaKnown RBP12.83□□□□□ -0.36
SMAD3-203ENST00000537194 CABP2Q9NPB3 220 aa12.83□□□□□ -0.36
SMAD3-203ENST00000537194 TNS1Q9HBL0 1735 aaKnown RBP12.82□□□□□ -0.36
SMAD3-203ENST00000537194 DCAF8L1A6NGE4 600 aa12.82□□□□□ -0.36
SMAD3-203ENST00000537194 CAMKK2Q96RR4 588 aa12.82□□□□□ -0.36
SMAD3-203ENST00000537194 USP19O94966 1318 aa12.82□□□□□ -0.36
SMAD3-203ENST00000537194 EVC2Q86UK5 1308 aa12.82□□□□□ -0.36
SMAD3-203ENST00000537194 NRKQ7Z2Y5 1582 aa12.81□□□□□ -0.36
SMAD3-203ENST00000537194 TOM1L2Q6ZVM7 507 aa12.8□□□□□ -0.36
SMAD3-203ENST00000537194 CABP1Q9NZU7 370 aa12.8□□□□□ -0.36
SMAD3-203ENST00000537194 QRICH2Q9H0J4 1663 aa12.8□□□□□ -0.36
SMAD3-203ENST00000537194 CAMTA1Q9Y6Y1 1673 aa12.8□□□□□ -0.36
SMAD3-203ENST00000537194 ZNF692Q9BU19 519 aaPredicted RBP12.79□□□□□ -0.36
SMAD3-203ENST00000537194 PPP1R1BQ9UD71 204 aaPredicted RBP12.79□□□□□ -0.36
SMAD3-203ENST00000537194 CRB1P82279 1406 aa12.79□□□□□ -0.36
SMAD3-203ENST00000537194 DDB1Q16531 1140 aa12.78□□□□□ -0.36
SMAD3-203ENST00000537194 KCNH5Q8NCM2 988 aa12.78□□□□□ -0.36
SMAD3-203ENST00000537194 CDCA7Q9BWT1 371 aaPredicted RBP12.78□□□□□ -0.36
SMAD3-203ENST00000537194 CSB-PGBD3P0DP91 1061 aa12.77□□□□□ -0.37
SMAD3-203ENST00000537194 AATKQ6ZMQ8 1374 aa12.77□□□□□ -0.37
SMAD3-203ENST00000537194 OVOS2A0A0G2JMS6 1433 aa12.77□□□□□ -0.37
SMAD3-203ENST00000537194 OVOS2A0A0J9YW53 1432 aa12.77□□□□□ -0.37
SMAD3-203ENST00000537194 USP6P35125 1406 aa12.77□□□□□ -0.37
SMAD3-203ENST00000537194 OVOS2Q6IE36 1432 aa12.77□□□□□ -0.37
SMAD3-203ENST00000537194 COL5A2P05997 1499 aaPredicted RBP12.77□□□□□ -0.37
SMAD3-203ENST00000537194 LMO7Q8WWI1 1683 aa12.77□□□□□ -0.37
SMAD3-203ENST00000537194 KAT6BQ8WYB5 2073 aa12.76□□□□□ -0.37
SMAD3-203ENST00000537194 SPON1Q9HCB6 807 aa12.76□□□□□ -0.37
SMAD3-203ENST00000537194 PARP4Q9UKK3 1724 aaKnown RBP12.76□□□□□ -0.37
SMAD3-203ENST00000537194 ROCK2O75116 1388 aaKnown RBP12.75□□□□□ -0.37
SMAD3-203ENST00000537194 L3MBTL2Q969R5 705 aa12.75□□□□□ -0.37
SMAD3-203ENST00000537194 TTC21AQ8NDW8 1320 aa12.74□□□□□ -0.37
SMAD3-203ENST00000537194 NEUROD1Q13562 356 aa12.74□□□□□ -0.37
SMAD3-203ENST00000537194 RREB1Q92766 1687 aa12.73□□□□□ -0.37
SMAD3-203ENST00000537194 WDR17Q8IZU2 1322 aa12.73□□□□□ -0.37
SMAD3-203ENST00000537194 PLSCR1O15162 318 aa12.73□□□□□ -0.37
SMAD3-203ENST00000537194 SOX12O15370 315 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms