RNA–Protein interactions for RNA: ENST00000535993.1

CCND1-202, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-202ENST00000535993 PLCH1Q4KWH8 1693 aa17.58■□□□□ 0.4
CCND1-202ENST00000535993 ALS2Q96Q42 1657 aa17.58■□□□□ 0.4
CCND1-202ENST00000535993 SF3B2Q13435 895 aaKnown RBP17.57■□□□□ 0.4
CCND1-202ENST00000535993 KRT27Q7Z3Y8 459 aa17.57■□□□□ 0.4
CCND1-202ENST00000535993 PRDM11Q9NQV5 511 aa17.57■□□□□ 0.4
CCND1-202ENST00000535993 BLMP54132 1417 aaPredicted RBP17.56■□□□□ 0.4
CCND1-202ENST00000535993 A0A0G2JS52 829 aa17.56■□□□□ 0.4
CCND1-202ENST00000535993 PLEKHG3A1L390 1219 aa17.56■□□□□ 0.4
CCND1-202ENST00000535993 MYT1Q01538 1121 aa17.56■□□□□ 0.4
CCND1-202ENST00000535993 NBPF8Q3BBV2 869 aa17.56■□□□□ 0.4
CCND1-202ENST00000535993 ITSN1Q15811 1721 aa17.55■□□□□ 0.4
CCND1-202ENST00000535993 POLR3AO14802 1390 aaPredicted RBP17.55■□□□□ 0.4
CCND1-202ENST00000535993 ACEP12821 1306 aa17.55■□□□□ 0.4
CCND1-202ENST00000535993 CENPJQ9HC77 1338 aaPredicted RBP17.55■□□□□ 0.4
CCND1-202ENST00000535993 SRPK2P78362 688 aaKnown RBP17.54■□□□□ 0.4
CCND1-202ENST00000535993 FAM98CQ17RN3 349 aaKnown RBP17.54■□□□□ 0.4
CCND1-202ENST00000535993 COL14A1Q05707 1796 aaKnown RBP17.53■□□□□ 0.4
CCND1-202ENST00000535993 TRIM26Q12899 539 aaPredicted RBP17.53■□□□□ 0.4
CCND1-202ENST00000535993 L3MBTL2Q969R5 705 aa17.53■□□□□ 0.4
CCND1-202ENST00000535993 SPATA31A5Q5VU36 1347 aa17.52■□□□□ 0.4
CCND1-202ENST00000535993 SPATA31A7Q8IWB4 1347 aa17.52■□□□□ 0.4
CCND1-202ENST00000535993 NUTM2GQ5VZR2 741 aa17.51■□□□□ 0.39
CCND1-202ENST00000535993 ABTB2Q8N961 1025 aa17.51■□□□□ 0.39
CCND1-202ENST00000535993 KIAA0232Q92628 1395 aa17.51■□□□□ 0.39
CCND1-202ENST00000535993 CABP2Q9NPB3 220 aa17.5■□□□□ 0.39
CCND1-202ENST00000535993 NRAPQ86VF7 1730 aa17.5■□□□□ 0.39
CCND1-202ENST00000535993 BRWD3Q6RI45 1802 aa17.49■□□□□ 0.39
CCND1-202ENST00000535993 ZC3H6P61129 1189 aaKnown RBP17.49■□□□□ 0.39
CCND1-202ENST00000535993 CHRNA2Q15822 529 aa17.49■□□□□ 0.39
CCND1-202ENST00000535993 PPIP5K1Q6PFW1 1433 aa17.48■□□□□ 0.39
CCND1-202ENST00000535993 NEUROD1Q13562 356 aa17.48■□□□□ 0.39
CCND1-202ENST00000535993 DEFB132Q7Z7B7 95 aa17.48■□□□□ 0.39
CCND1-202ENST00000535993 SIN3AQ96ST3 1273 aa17.48■□□□□ 0.39
CCND1-202ENST00000535993 TOPAZ1Q8N9V7 1692 aa17.48■□□□□ 0.39
CCND1-202ENST00000535993 NLRP13Q86W25 1043 aa17.47■□□□□ 0.39
CCND1-202ENST00000535993 STRN4Q9NRL3 753 aa17.47■□□□□ 0.39
CCND1-202ENST00000535993 BRD4O60885 1362 aaPredicted RBP17.47■□□□□ 0.39
CCND1-202ENST00000535993 CRYBG1Q9Y4K1 1723 aa17.47■□□□□ 0.39
CCND1-202ENST00000535993 EVA1CP58658 441 aa17.46■□□□□ 0.39
CCND1-202ENST00000535993 SPATA31A1Q5TZJ5 1347 aa17.46■□□□□ 0.38
CCND1-202ENST00000535993 EVC2Q86UK5 1308 aa17.46■□□□□ 0.38
CCND1-202ENST00000535993 SRCAPQ6ZRS2 3230 aa17.45■□□□□ 0.38
CCND1-202ENST00000535993 BAG6P46379 1132 aa17.45■□□□□ 0.38
CCND1-202ENST00000535993 CABP1Q9NZU7 370 aa17.45■□□□□ 0.38
CCND1-202ENST00000535993 USP19O94966 1318 aa17.45■□□□□ 0.38
CCND1-202ENST00000535993 ROCK2O75116 1388 aaKnown RBP17.44■□□□□ 0.38
CCND1-202ENST00000535993 CPDO75976 1380 aa17.43■□□□□ 0.38
CCND1-202ENST00000535993 GCP02774 474 aa17.42■□□□□ 0.38
CCND1-202ENST00000535993 PHRF1Q9P1Y6 1649 aaKnown RBP17.42■□□□□ 0.38
CCND1-202ENST00000535993 BARGINQ6ZT62 677 aa17.41■□□□□ 0.38
CCND1-202ENST00000535993 USP35Q9P2H5 1018 aa17.41■□□□□ 0.38
CCND1-202ENST00000535993 QRICH2Q9H0J4 1663 aa17.41■□□□□ 0.38
CCND1-202ENST00000535993 SSH2Q76I76 1423 aa17.4■□□□□ 0.38
CCND1-202ENST00000535993 NLRP6P59044 892 aa17.4■□□□□ 0.38
CCND1-202ENST00000535993 FAM182BQ5T319 152 aa17.4■□□□□ 0.38
CCND1-202ENST00000535993 USP6P35125 1406 aa17.39■□□□□ 0.38
CCND1-202ENST00000535993 THSD7AQ9UPZ6 1657 aa17.39■□□□□ 0.37
CCND1-202ENST00000535993 LARP1Q6PKG0 1096 aaKnown RBP17.39■□□□□ 0.37
CCND1-202ENST00000535993 FAM196AQ6ZSG2 479 aa17.39■□□□□ 0.37
CCND1-202ENST00000535993 TCP11L2Q8N4U5 519 aa17.39■□□□□ 0.37
CCND1-202ENST00000535993 NRKQ7Z2Y5 1582 aa17.39■□□□□ 0.37
CCND1-202ENST00000535993 ZNF692Q9BU19 519 aaPredicted RBP17.38■□□□□ 0.37
CCND1-202ENST00000535993 TRPM1Q7Z4N2 1603 aa17.38■□□□□ 0.37
CCND1-202ENST00000535993 PDE3BQ13370 1112 aa17.37■□□□□ 0.37
CCND1-202ENST00000535993 THRAP3Q9Y2W1 955 aaKnown RBP17.37■□□□□ 0.37
CCND1-202ENST00000535993 CAMTA1Q9Y6Y1 1673 aa17.36■□□□□ 0.37
CCND1-202ENST00000535993 EN1Q05925 392 aaPredicted RBP17.36■□□□□ 0.37
CCND1-202ENST00000535993 ZBTB7CA1YPR0 619 aa17.35■□□□□ 0.37
CCND1-202ENST00000535993 DISP2A7MBM2 1401 aa17.33■□□□□ 0.36
CCND1-202ENST00000535993 AATKQ6ZMQ8 1374 aa17.33■□□□□ 0.36
CCND1-202ENST00000535993 TTC21BQ7Z4L5 1316 aa17.33■□□□□ 0.36
CCND1-202ENST00000535993 TRIM37O94972 964 aa17.33■□□□□ 0.36
CCND1-202ENST00000535993 CARD11Q9BXL7 1154 aa17.33■□□□□ 0.36
CCND1-202ENST00000535993 RGPD1P0DJD0 1748 aa17.33■□□□□ 0.36
CCND1-202ENST00000535993 LMO7Q8WWI1 1683 aa17.32■□□□□ 0.36
CCND1-202ENST00000535993 COL5A2P05997 1499 aaPredicted RBP17.32■□□□□ 0.36
CCND1-202ENST00000535993 TTC21AQ8NDW8 1320 aa17.32■□□□□ 0.36
CCND1-202ENST00000535993 KCNH5Q8NCM2 988 aa17.32■□□□□ 0.36
CCND1-202ENST00000535993 SLIT3O75094 1523 aa17.31■□□□□ 0.36
CCND1-202ENST00000535993 CRB1P82279 1406 aa17.3■□□□□ 0.36
CCND1-202ENST00000535993 TONSLQ96HA7 1378 aa17.3■□□□□ 0.36
CCND1-202ENST00000535993 SBNO2Q9Y2G9 1366 aa17.3■□□□□ 0.36
CCND1-202ENST00000535993 PSDA5PKW4 1024 aaPredicted RBP17.3■□□□□ 0.36
CCND1-202ENST00000535993 C11orf95C9JLR9 678 aaPredicted RBP17.3■□□□□ 0.36
CCND1-202ENST00000535993 APBA3O96018 575 aa17.3■□□□□ 0.36
CCND1-202ENST00000535993 KTN1Q86UP2 1357 aaKnown RBP17.29■□□□□ 0.36
CCND1-202ENST00000535993 EZH2Q15910 746 aaKnown RBP17.29■□□□□ 0.36
CCND1-202ENST00000535993 TOM1L2Q6ZVM7 507 aa17.29■□□□□ 0.36
CCND1-202ENST00000535993 CAMKK2Q96RR4 588 aa17.29■□□□□ 0.36
CCND1-202ENST00000535993 PARD3Q8TEW0 1356 aa17.28■□□□□ 0.36
CCND1-202ENST00000535993 ARHGEF25Q86VW2 580 aa17.28■□□□□ 0.36
CCND1-202ENST00000535993 CPSF1Q10570 1443 aaKnown RBP17.28■□□□□ 0.36
CCND1-202ENST00000535993 PIK3C2AO00443 1686 aa17.26■□□□□ 0.35
CCND1-202ENST00000535993 WDR17Q8IZU2 1322 aa17.26■□□□□ 0.35
CCND1-202ENST00000535993 SOX12O15370 315 aa17.26■□□□□ 0.35
CCND1-202ENST00000535993 CDCA7Q9BWT1 371 aaPredicted RBP17.26■□□□□ 0.35
CCND1-202ENST00000535993 AXIN2Q9Y2T1 843 aa17.26■□□□□ 0.35
CCND1-202ENST00000535993 CSB-PGBD3P0DP91 1061 aa17.25■□□□□ 0.35
CCND1-202ENST00000535993 R3HDM1Q15032 1099 aaKnown RBP17.25■□□□□ 0.35
CCND1-202ENST00000535993 DDB1Q16531 1140 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms