RNA–Protein interactions for RNA: ENST00000535715.5

OTUB1-206, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,391 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-206ENST00000535715 ST20-MTHFSA0A0A6YYL1 179 aa22.45■■□□□ 1.18
OTUB1-206ENST00000535715 FNBP4Q8N3X1 1017 aaPredicted RBP22.45■■□□□ 1.18
OTUB1-206ENST00000535715 USP21Q9UK80 565 aa22.44■■□□□ 1.18
OTUB1-206ENST00000535715 QTRT2Q9H974 415 aaKnown RBP22.42■■□□□ 1.18
OTUB1-206ENST00000535715 ABCA3Q99758 1704 aa22.42■■□□□ 1.18
OTUB1-206ENST00000535715 USP47Q96K76 1375 aa22.42■■□□□ 1.18
OTUB1-206ENST00000535715 SLC24A1O60721 1099 aa22.41■■□□□ 1.18
OTUB1-206ENST00000535715 RXRBP28702 533 aa22.41■■□□□ 1.18
OTUB1-206ENST00000535715 TESK2Q96S53 571 aa22.41■■□□□ 1.18
OTUB1-206ENST00000535715 BRD4O60885 1362 aaPredicted RBP22.4■■□□□ 1.18
OTUB1-206ENST00000535715 USP6P35125 1406 aa22.38■■□□□ 1.17
OTUB1-206ENST00000535715 ABTB2Q8N961 1025 aa22.38■■□□□ 1.17
OTUB1-206ENST00000535715 ZNF692Q9BU19 519 aaPredicted RBP22.38■■□□□ 1.17
OTUB1-206ENST00000535715 NUTM2GQ5VZR2 741 aa22.38■■□□□ 1.17
OTUB1-206ENST00000535715 PUS7Q96PZ0 661 aaKnown RBP22.38■■□□□ 1.17
OTUB1-206ENST00000535715 TRPC5Q9UL62 973 aaPredicted RBP22.38■■□□□ 1.17
OTUB1-206ENST00000535715 BCL9LQ86UU0 1499 aa22.37■■□□□ 1.17
OTUB1-206ENST00000535715 SLIT2O94813 1529 aa22.36■■□□□ 1.17
OTUB1-206ENST00000535715 CRYBG1Q9Y4K1 1723 aa22.36■■□□□ 1.17
OTUB1-206ENST00000535715 RBM6P78332 1123 aaKnown RBP22.36■■□□□ 1.17
OTUB1-206ENST00000535715 TMC1Q8TDI8 760 aa22.35■■□□□ 1.17
OTUB1-206ENST00000535715 FAM83GA6ND36 823 aa22.34■■□□□ 1.17
OTUB1-206ENST00000535715 UNC5CLQ8IV45 518 aa22.34■■□□□ 1.17
OTUB1-206ENST00000535715 ATRNO75882 1429 aa22.33■■□□□ 1.17
OTUB1-206ENST00000535715 CPSF1Q10570 1443 aaKnown RBP22.33■■□□□ 1.17
OTUB1-206ENST00000535715 SSH2Q76I76 1423 aa22.33■■□□□ 1.17
OTUB1-206ENST00000535715 AKAP12Q02952 1782 aa22.33■■□□□ 1.17
OTUB1-206ENST00000535715 NLRP13Q86W25 1043 aa22.33■■□□□ 1.17
OTUB1-206ENST00000535715 TMF1P82094 1093 aa22.32■■□□□ 1.16
OTUB1-206ENST00000535715 CDK12Q9NYV4 1490 aaPredicted RBP22.31■■□□□ 1.16
OTUB1-206ENST00000535715 PHRF1Q9P1Y6 1649 aaKnown RBP22.31■■□□□ 1.16
OTUB1-206ENST00000535715 KTN1Q86UP2 1357 aaKnown RBP22.31■■□□□ 1.16
OTUB1-206ENST00000535715 SLC12A5Q9H2X9 1139 aa22.31■■□□□ 1.16
OTUB1-206ENST00000535715 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.31■■□□□ 1.16
OTUB1-206ENST00000535715 PLCH1Q4KWH8 1693 aa22.3■■□□□ 1.16
OTUB1-206ENST00000535715 USP19O94966 1318 aa22.3■■□□□ 1.16
OTUB1-206ENST00000535715 TTC21BQ7Z4L5 1316 aa22.3■■□□□ 1.16
OTUB1-206ENST00000535715 NWD2Q9ULI1 1742 aa22.3■■□□□ 1.16
OTUB1-206ENST00000535715 NLRP6P59044 892 aa22.29■■□□□ 1.16
OTUB1-206ENST00000535715 HDGFL2Q7Z4V5 671 aaPredicted RBP22.29■■□□□ 1.16
OTUB1-206ENST00000535715 PRDM11Q9NQV5 511 aa22.29■■□□□ 1.16
OTUB1-206ENST00000535715 COL14A1Q05707 1796 aaKnown RBP22.29■■□□□ 1.16
OTUB1-206ENST00000535715 CD163L1Q9NR16 1453 aa22.28■■□□□ 1.16
OTUB1-206ENST00000535715 TTC21AQ8NDW8 1320 aa22.28■■□□□ 1.16
OTUB1-206ENST00000535715 KIAA0232Q92628 1395 aa22.28■■□□□ 1.16
OTUB1-206ENST00000535715 ZC3H6P61129 1189 aaKnown RBP22.27■■□□□ 1.16
OTUB1-206ENST00000535715 GJD4Q96KN9 370 aaPredicted RBP22.27■■□□□ 1.16
OTUB1-206ENST00000535715 BTG4Q9NY30 223 aa22.27■■□□□ 1.16
OTUB1-206ENST00000535715 TERF2IPQ9NYB0 399 aa22.27■■□□□ 1.16
OTUB1-206ENST00000535715 NINLQ9Y2I6 1382 aa22.27■■□□□ 1.16
OTUB1-206ENST00000535715 MON2Q7Z3U7 1717 aa22.27■■□□□ 1.16
OTUB1-206ENST00000535715 PIK3C2AO00443 1686 aa22.26■■□□□ 1.15
OTUB1-206ENST00000535715 NRKQ7Z2Y5 1582 aa22.26■■□□□ 1.15
OTUB1-206ENST00000535715 GCP02774 474 aa22.25■■□□□ 1.15
OTUB1-206ENST00000535715 CDCA8Q53HL2 280 aa22.25■■□□□ 1.15
OTUB1-206ENST00000535715 RGS12O14924 1447 aa22.25■■□□□ 1.15
OTUB1-206ENST00000535715 VPS72Q15906 364 aa22.25■■□□□ 1.15
OTUB1-206ENST00000535715 CHRNA2Q15822 529 aa22.24■■□□□ 1.15
OTUB1-206ENST00000535715 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.24■■□□□ 1.15
OTUB1-206ENST00000535715 A0A1W2PP64 1363 aa22.23■■□□□ 1.15
OTUB1-206ENST00000535715 EIF4G2P78344 907 aaKnown RBP eCLIP22.23■■□□□ 1.15
OTUB1-206ENST00000535715 CCDC9Q9Y3X0 531 aaKnown RBP22.23■■□□□ 1.15
OTUB1-206ENST00000535715 CPDO75976 1380 aa22.22■■□□□ 1.15
OTUB1-206ENST00000535715 NRAPQ86VF7 1730 aa22.21■■□□□ 1.15
OTUB1-206ENST00000535715 SLIT3O75094 1523 aa22.21■■□□□ 1.15
OTUB1-206ENST00000535715 EDC4Q6P2E9 1401 aaKnown RBP22.2■■□□□ 1.14
OTUB1-206ENST00000535715 GLI3P10071 1580 aa22.2■■□□□ 1.14
OTUB1-206ENST00000535715 HSPA5P11021 654 aaKnown RBP22.19■■□□□ 1.14
OTUB1-206ENST00000535715 KCNH5Q8NCM2 988 aa22.18■■□□□ 1.14
OTUB1-206ENST00000535715 ANKRD36BQ8N2N9 1353 aa22.18■■□□□ 1.14
OTUB1-206ENST00000535715 NME9Q86XW9 330 aa22.17■■□□□ 1.14
OTUB1-206ENST00000535715 USP31Q70CQ4 1352 aa22.17■■□□□ 1.14
OTUB1-206ENST00000535715 ZBTB7CA1YPR0 619 aa22.16■■□□□ 1.14
OTUB1-206ENST00000535715 ZRANB1Q9UGI0 708 aa22.16■■□□□ 1.14
OTUB1-206ENST00000535715 STRN4Q9NRL3 753 aa22.15■■□□□ 1.14
OTUB1-206ENST00000535715 SOX12O15370 315 aa22.14■■□□□ 1.14
OTUB1-206ENST00000535715 EVA1CP58658 441 aa22.14■■□□□ 1.14
OTUB1-206ENST00000535715 LMO7Q8WWI1 1683 aa22.14■■□□□ 1.13
OTUB1-206ENST00000535715 CAMTA1Q9Y6Y1 1673 aa22.14■■□□□ 1.13
OTUB1-206ENST00000535715 SPATA31A5Q5VU36 1347 aa22.13■■□□□ 1.13
OTUB1-206ENST00000535715 SPATA31A7Q8IWB4 1347 aa22.13■■□□□ 1.13
OTUB1-206ENST00000535715 ONECUT3O60422 494 aaPredicted RBP22.12■■□□□ 1.13
OTUB1-206ENST00000535715 AATKQ6ZMQ8 1374 aa22.12■■□□□ 1.13
OTUB1-206ENST00000535715 USP54Q70EL1 1684 aa22.12■■□□□ 1.13
OTUB1-206ENST00000535715 ARHGEF25Q86VW2 580 aa22.12■■□□□ 1.13
OTUB1-206ENST00000535715 SEPT12Q8IYM1 358 aa22.11■■□□□ 1.13
OTUB1-206ENST00000535715 POLR3GLQ9BT43 218 aa22.1■■□□□ 1.13
OTUB1-206ENST00000535715 NFAT5O94916 1531 aa22.09■■□□□ 1.13
OTUB1-206ENST00000535715 SPATA31A1Q5TZJ5 1347 aa22.09■■□□□ 1.13
OTUB1-206ENST00000535715 MYOM1P52179 1685 aa22.09■■□□□ 1.13
OTUB1-206ENST00000535715 FAM98CQ17RN3 349 aaKnown RBP22.09■■□□□ 1.13
OTUB1-206ENST00000535715 UPF1Q92900 1129 aaKnown RBP eCLIP22.09■■□□□ 1.139e-8■■■□□ 18.2
OTUB1-206ENST00000535715 A0A0G2JS52 829 aa22.08■■□□□ 1.12
OTUB1-206ENST00000535715 MYT1Q01538 1121 aa22.08■■□□□ 1.12
OTUB1-206ENST00000535715 LARP1Q6PKG0 1096 aaKnown RBP22.08■■□□□ 1.12
OTUB1-206ENST00000535715 OVOS2A0A0J9YW53 1432 aa22.08■■□□□ 1.12
OTUB1-206ENST00000535715 OVOS2Q6IE36 1432 aa22.08■■□□□ 1.12
OTUB1-206ENST00000535715 COL5A2P05997 1499 aaPredicted RBP22.07■■□□□ 1.12
OTUB1-206ENST00000535715 COL18A1P39060 1754 aa22.07■■□□□ 1.12
OTUB1-206ENST00000535715 COG3Q96JB2 828 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 199.2 ms