RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 CPS1P31327 1500 aa23.96■■□□□ 1.43
HTATSF1-204ENST00000535601 SKAP1Q86WV1 359 aa23.95■■□□□ 1.43
HTATSF1-204ENST00000535601 POLKQ9UBT6 870 aa23.95■■□□□ 1.42
HTATSF1-204ENST00000535601 TECPR2O15040 1411 aa23.95■■□□□ 1.42
HTATSF1-204ENST00000535601 MAP2P11137 1827 aaKnown RBP23.94■■□□□ 1.42
HTATSF1-204ENST00000535601 RBM19Q9Y4C8 960 aaKnown RBP23.94■■□□□ 1.42
HTATSF1-204ENST00000535601 FAM135BQ49AJ0 1406 aa23.94■■□□□ 1.42
HTATSF1-204ENST00000535601 KNDC1Q76NI1 1749 aa23.94■■□□□ 1.42
HTATSF1-204ENST00000535601 ATP7BP35670 1465 aa23.93■■□□□ 1.42
HTATSF1-204ENST00000535601 ANKRD26Q9UPS8 1709 aa23.93■■□□□ 1.42
HTATSF1-204ENST00000535601 HMOX1P09601 288 aa23.93■■□□□ 1.42
HTATSF1-204ENST00000535601 KCNA6P17658 529 aa23.92■■□□□ 1.42
HTATSF1-204ENST00000535601 CPSF1Q10570 1443 aaKnown RBP23.91■■□□□ 1.42
HTATSF1-204ENST00000535601 DIAPH1O60610 1272 aaKnown RBP23.91■■□□□ 1.42
HTATSF1-204ENST00000535601 TRMT2AQ8IZ69 625 aaKnown RBP23.91■■□□□ 1.42
HTATSF1-204ENST00000535601 BCL2L13Q9BXK5 485 aa23.91■■□□□ 1.42
HTATSF1-204ENST00000535601 ACEP12821 1306 aa23.91■■□□□ 1.42
HTATSF1-204ENST00000535601 E9PSI1 815 aa23.9■■□□□ 1.42
HTATSF1-204ENST00000535601 COL3A1P02461 1466 aaPredicted RBP23.9■■□□□ 1.42
HTATSF1-204ENST00000535601 MED14O60244 1454 aa23.89■■□□□ 1.41
HTATSF1-204ENST00000535601 IQSEC2Q5JU85 1478 aa23.89■■□□□ 1.41
HTATSF1-204ENST00000535601 ARHGAP23Q9P227 1491 aa23.89■■□□□ 1.41
HTATSF1-204ENST00000535601 SLIT1O75093 1534 aa23.89■■□□□ 1.41
HTATSF1-204ENST00000535601 TSR2Q969E8 191 aaKnown RBP23.88■■□□□ 1.41
HTATSF1-204ENST00000535601 RGPD8O14715 1765 aaPredicted RBP23.88■■□□□ 1.41
HTATSF1-204ENST00000535601 NKTRP30414 1462 aaKnown RBP23.87■■□□□ 1.41
HTATSF1-204ENST00000535601 EDC4Q6P2E9 1401 aaKnown RBP23.87■■□□□ 1.41
HTATSF1-204ENST00000535601 COG3Q96JB2 828 aa23.86■■□□□ 1.41
HTATSF1-204ENST00000535601 PLEKHF1Q96S99 279 aa23.86■■□□□ 1.41
HTATSF1-204ENST00000535601 SIRT1Q96EB6 747 aa23.86■■□□□ 1.41
HTATSF1-204ENST00000535601 TBX22Q9Y458 520 aa23.86■■□□□ 1.41
HTATSF1-204ENST00000535601 CDC42BPGQ6DT37 1551 aa23.86■■□□□ 1.41
HTATSF1-204ENST00000535601 DNAJC5Q9H3Z4 198 aa23.85■■□□□ 1.41
HTATSF1-204ENST00000535601 CEP170BQ9Y4F5 1589 aaPredicted RBP23.85■■□□□ 1.41
HTATSF1-204ENST00000535601 MAPK8IP3Q9UPT6 1336 aa23.84■■□□□ 1.41
HTATSF1-204ENST00000535601 NUTM2GQ5VZR2 741 aa23.84■■□□□ 1.41
HTATSF1-204ENST00000535601 ITSN1Q15811 1721 aa23.83■■□□□ 1.41
HTATSF1-204ENST00000535601 TMPOP42166 694 aaKnown RBP23.83■■□□□ 1.41
HTATSF1-204ENST00000535601 FRAT1Q92837 279 aaPredicted RBP23.83■■□□□ 1.41
HTATSF1-204ENST00000535601 PRKAR2BP31323 418 aa23.83■■□□□ 1.4
HTATSF1-204ENST00000535601 TNNQ9UQP3 1299 aa23.82■■□□□ 1.4
HTATSF1-204ENST00000535601 PLEKHG5O94827 1062 aa23.82■■□□□ 1.4
HTATSF1-204ENST00000535601 PHACTR3Q96KR7 559 aa23.82■■□□□ 1.4
HTATSF1-204ENST00000535601 TTC21BQ7Z4L5 1316 aa23.81■■□□□ 1.4
HTATSF1-204ENST00000535601 RIPK4P57078 832 aa23.81■■□□□ 1.4
HTATSF1-204ENST00000535601 THUMPD2Q9BTF0 503 aaKnown RBP23.81■■□□□ 1.4
HTATSF1-204ENST00000535601 TRIM35Q9UPQ4 493 aa23.81■■□□□ 1.4
HTATSF1-204ENST00000535601 MON2Q7Z3U7 1717 aa23.8■■□□□ 1.4
HTATSF1-204ENST00000535601 NGDNQ8NEJ9 315 aaKnown RBP23.8■■□□□ 1.4
HTATSF1-204ENST00000535601 PHF23Q9BUL5 403 aaPredicted RBP23.8■■□□□ 1.4
HTATSF1-204ENST00000535601 AKAP12Q02952 1782 aa23.8■■□□□ 1.4
HTATSF1-204ENST00000535601 PNPLA6Q8IY17 1366 aa23.79■■□□□ 1.4
HTATSF1-204ENST00000535601 PANK1Q8TE04 598 aa23.78■■□□□ 1.4
HTATSF1-204ENST00000535601 CANXP27824 592 aaKnown RBP23.77■■□□□ 1.4
HTATSF1-204ENST00000535601 ANKLE2Q86XL3 938 aa23.77■■□□□ 1.4
HTATSF1-204ENST00000535601 LAS1LQ9Y4W2 734 aaKnown RBP23.77■■□□□ 1.4
HTATSF1-204ENST00000535601 LRRC7Q96NW7 1537 aa23.77■■□□□ 1.39
HTATSF1-204ENST00000535601 ZNF692Q9BU19 519 aaPredicted RBP23.76■■□□□ 1.39
HTATSF1-204ENST00000535601 RSPH6AQ9H0K4 717 aa23.76■■□□□ 1.39
HTATSF1-204ENST00000535601 IL13P35225 146 aa23.74■■□□□ 1.39
HTATSF1-204ENST00000535601 AEBP1Q8IUX7 1158 aa23.74■■□□□ 1.39
HTATSF1-204ENST00000535601 CLUAP1Q96AJ1 413 aa23.74■■□□□ 1.39
HTATSF1-204ENST00000535601 DIP2AQ14689 1571 aa23.74■■□□□ 1.39
HTATSF1-204ENST00000535601 ADGRB2O60241 1585 aa23.73■■□□□ 1.39
HTATSF1-204ENST00000535601 PLEKHG3A1L390 1219 aa23.73■■□□□ 1.39
HTATSF1-204ENST00000535601 WDR63Q8IWG1 891 aa23.73■■□□□ 1.39
HTATSF1-204ENST00000535601 USP6P35125 1406 aa23.73■■□□□ 1.39
HTATSF1-204ENST00000535601 HSP90AB2PQ58FF8 381 aa23.73■■□□□ 1.39
HTATSF1-204ENST00000535601 FANCIQ9NVI1 1328 aa23.72■■□□□ 1.39
HTATSF1-204ENST00000535601 COG6Q9Y2V7 657 aa23.72■■□□□ 1.39
HTATSF1-204ENST00000535601 PAK3O75914 559 aaPredicted RBP23.72■■□□□ 1.39
HTATSF1-204ENST00000535601 EXOSC9Q06265 439 aaKnown RBP23.72■■□□□ 1.39
HTATSF1-204ENST00000535601 C14orf37Q86TY3 774 aa23.72■■□□□ 1.39
HTATSF1-204ENST00000535601 TOPAZ1Q8N9V7 1692 aa23.72■■□□□ 1.39
HTATSF1-204ENST00000535601 RARSP54136 660 aaKnown RBP23.71■■□□□ 1.39
HTATSF1-204ENST00000535601 NGEFQ8N5V2 710 aa23.71■■□□□ 1.39
HTATSF1-204ENST00000535601 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.71■■□□□ 1.39
HTATSF1-204ENST00000535601 ADAMTSL3P82987 1691 aa23.7■■□□□ 1.39
HTATSF1-204ENST00000535601 PTCH1Q13635 1447 aa23.7■■□□□ 1.38
HTATSF1-204ENST00000535601 CCDC27Q2M243 656 aa23.7■■□□□ 1.38
HTATSF1-204ENST00000535601 FAM83GA6ND36 823 aa23.7■■□□□ 1.38
HTATSF1-204ENST00000535601 FCHSD2O94868 740 aa23.69■■□□□ 1.38
HTATSF1-204ENST00000535601 DCTN1Q14203 1278 aa23.69■■□□□ 1.38
HTATSF1-204ENST00000535601 XRN1Q8IZH2 1706 aaKnown RBP23.69■■□□□ 1.38
HTATSF1-204ENST00000535601 RLBP1P12271 317 aa23.68■■□□□ 1.38
HTATSF1-204ENST00000535601 SETD1BQ9UPS6 1966 aaKnown RBP23.68■■□□□ 1.38
HTATSF1-204ENST00000535601 EIF4A2Q14240 407 aaKnown RBP23.67■■□□□ 1.38
HTATSF1-204ENST00000535601 MYH16Q9H6N6 1097 aa23.67■■□□□ 1.38
HTATSF1-204ENST00000535601 NRKQ7Z2Y5 1582 aa23.67■■□□□ 1.38
HTATSF1-204ENST00000535601 XPCQ01831 940 aaPredicted RBP23.66■■□□□ 1.38
HTATSF1-204ENST00000535601 SULT6B1Q6IMI4 303 aa23.65■■□□□ 1.38
HTATSF1-204ENST00000535601 ELL2O00472 640 aaPredicted RBP23.65■■□□□ 1.38
HTATSF1-204ENST00000535601 NLRP6P59044 892 aa23.64■■□□□ 1.38
HTATSF1-204ENST00000535601 CDK12Q9NYV4 1490 aaPredicted RBP23.64■■□□□ 1.37
HTATSF1-204ENST00000535601 TCERG1O14776 1098 aaKnown RBP23.64■■□□□ 1.37
HTATSF1-204ENST00000535601 OVOS2A0A0J9YW53 1432 aa23.63■■□□□ 1.37
HTATSF1-204ENST00000535601 OVOS2Q6IE36 1432 aa23.63■■□□□ 1.37
HTATSF1-204ENST00000535601 AATKQ6ZMQ8 1374 aa23.63■■□□□ 1.37
HTATSF1-204ENST00000535601 NEFMP07197 916 aa23.63■■□□□ 1.37
HTATSF1-204ENST00000535601 ANP32EQ9BTT0 268 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms