RNA–Protein interactions for RNA: ENST00000535589.3

ACTR3-208, Transcript of ARP3 actin related protein 3 homolog, humanhuman

TSL 2 BASIC

Gene ACTR3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3-208ENST00000535589 PHF8Q9UPP1 1060 aa22.18■■□□□ 1.14
ACTR3-208ENST00000535589 ZNF335Q9H4Z2 1342 aaPredicted RBP22.18■■□□□ 1.14
ACTR3-208ENST00000535589 NME9Q86XW9 330 aa22.17■■□□□ 1.14
ACTR3-208ENST00000535589 LRRC7Q96NW7 1537 aa22.17■■□□□ 1.14
ACTR3-208ENST00000535589 TTC21AQ8NDW8 1320 aa22.16■■□□□ 1.14
ACTR3-208ENST00000535589 SCAF1Q9H7N4 1312 aaKnown RBP22.15■■□□□ 1.14
ACTR3-208ENST00000535589 ATF3P18847 181 aa22.15■■□□□ 1.14
ACTR3-208ENST00000535589 HNRNPUQ00839 825 aaKnown RBP eCLIP22.15■■□□□ 1.14
ACTR3-208ENST00000535589 ESCO1Q5FWF5 840 aa22.15■■□□□ 1.14
ACTR3-208ENST00000535589 COG3Q96JB2 828 aa22.14■■□□□ 1.13
ACTR3-208ENST00000535589 C1orf167Q5SNV9 1468 aa22.14■■□□□ 1.13
ACTR3-208ENST00000535589 INSRP06213 1382 aa22.13■■□□□ 1.13
ACTR3-208ENST00000535589 MSH6P52701 1360 aa22.13■■□□□ 1.13
ACTR3-208ENST00000535589 MTHFSP49914 203 aa22.13■■□□□ 1.13
ACTR3-208ENST00000535589 KIF1AQ12756 1690 aa22.13■■□□□ 1.13
ACTR3-208ENST00000535589 MST1RQ04912 1400 aa22.13■■□□□ 1.13
ACTR3-208ENST00000535589 CADPS2Q86UW7 1296 aa22.11■■□□□ 1.13
ACTR3-208ENST00000535589 ZRANB1Q9UGI0 708 aa22.11■■□□□ 1.13
ACTR3-208ENST00000535589 OVOS2A0A0J9YW53 1432 aa22.11■■□□□ 1.13
ACTR3-208ENST00000535589 OVOS2Q6IE36 1432 aa22.11■■□□□ 1.13
ACTR3-208ENST00000535589 WDR43Q15061 677 aaKnown RBP eCLIP22.1■■□□□ 1.13
ACTR3-208ENST00000535589 CFAP53Q96M91 514 aa22.1■■□□□ 1.13
ACTR3-208ENST00000535589 ORAI2Q96SN7 254 aa22.1■■□□□ 1.13
ACTR3-208ENST00000535589 PIK3C2AO00443 1686 aa22.09■■□□□ 1.13
ACTR3-208ENST00000535589 AATKQ6ZMQ8 1374 aa22.09■■□□□ 1.13
ACTR3-208ENST00000535589 SHPRHQ149N8 1683 aa22.08■■□□□ 1.13
ACTR3-208ENST00000535589 USP31Q70CQ4 1352 aa22.08■■□□□ 1.13
ACTR3-208ENST00000535589 MAP2P11137 1827 aaKnown RBP22.07■■□□□ 1.12
ACTR3-208ENST00000535589 USP54Q70EL1 1684 aa22.07■■□□□ 1.12
ACTR3-208ENST00000535589 BLMP54132 1417 aaPredicted RBP22.06■■□□□ 1.12
ACTR3-208ENST00000535589 PSME1Q06323 249 aa22.06■■□□□ 1.12
ACTR3-208ENST00000535589 ADAMTS8Q9UP79 889 aa22.06■■□□□ 1.12
ACTR3-208ENST00000535589 SMG6Q86US8 1419 aaKnown RBP22.05■■□□□ 1.12
ACTR3-208ENST00000535589 POLKQ9UBT6 870 aa22.04■■□□□ 1.12
ACTR3-208ENST00000535589 ZBED9Q6R2W3 1325 aa22.04■■□□□ 1.12
ACTR3-208ENST00000535589 COL3A1P02461 1466 aaPredicted RBP22.04■■□□□ 1.12
ACTR3-208ENST00000535589 PNPLA6Q8IY17 1366 aa22.03■■□□□ 1.12
ACTR3-208ENST00000535589 MARF1Q9Y4F3 1742 aaKnown RBP22.02■■□□□ 1.12
ACTR3-208ENST00000535589 FOXO3O43524 673 aa22.01■■□□□ 1.11
ACTR3-208ENST00000535589 PAK3O75914 559 aaPredicted RBP22.01■■□□□ 1.11
ACTR3-208ENST00000535589 TRPM3Q9HCF6 1732 aaPredicted RBP22.01■■□□□ 1.11
ACTR3-208ENST00000535589 FBLN1P23142 703 aa22.01■■□□□ 1.11
ACTR3-208ENST00000535589 ABTB2Q8N961 1025 aa22.01■■□□□ 1.11
ACTR3-208ENST00000535589 CDK12Q9NYV4 1490 aaPredicted RBP21.99■■□□□ 1.11
ACTR3-208ENST00000535589 NLRP6P59044 892 aa21.99■■□□□ 1.11
ACTR3-208ENST00000535589 EMILIN1Q9Y6C2 1016 aa21.99■■□□□ 1.11
ACTR3-208ENST00000535589 KRT28Q7Z3Y7 464 aa21.98■■□□□ 1.11
ACTR3-208ENST00000535589 NUDCQ9Y266 331 aa21.97■■□□□ 1.11
ACTR3-208ENST00000535589 LTBP4Q8N2S1 1624 aa21.97■■□□□ 1.11
ACTR3-208ENST00000535589 RRS1Q15050 365 aaKnown RBP21.96■■□□□ 1.11
ACTR3-208ENST00000535589 PPM1GO15355 546 aaPredicted RBP21.96■■□□□ 1.11
ACTR3-208ENST00000535589 DIAPH1O60610 1272 aaKnown RBP21.96■■□□□ 1.11
ACTR3-208ENST00000535589 NPHP3Q7Z494 1330 aa21.94■■□□□ 1.1
ACTR3-208ENST00000535589 XPCQ01831 940 aaPredicted RBP21.94■■□□□ 1.1
ACTR3-208ENST00000535589 NUTM2GQ5VZR2 741 aa21.94■■□□□ 1.1
ACTR3-208ENST00000535589 SLAIN2Q9P270 581 aa21.94■■□□□ 1.1
ACTR3-208ENST00000535589 ALS2Q96Q42 1657 aa21.92■■□□□ 1.1
ACTR3-208ENST00000535589 BRINP3Q76B58 766 aa21.92■■□□□ 1.1
ACTR3-208ENST00000535589 PEAK1Q9H792 1746 aa21.92■■□□□ 1.1
ACTR3-208ENST00000535589 SBNO1A3KN83 1393 aa21.91■■□□□ 1.1
ACTR3-208ENST00000535589 CCDC146Q8IYE0 955 aa21.9■■□□□ 1.1
ACTR3-208ENST00000535589 PXDNQ92626 1479 aa21.9■■□□□ 1.1
ACTR3-208ENST00000535589 SOX12O15370 315 aa21.9■■□□□ 1.1
ACTR3-208ENST00000535589 U2AF1L5P0DN76 240 aaPredicted RBP21.9■■□□□ 1.1
ACTR3-208ENST00000535589 U2AF1Q01081 240 aaKnown RBP eCLIP21.9■■□□□ 1.16e-8■□□□□ 10
ACTR3-208ENST00000535589 SENP3-EIF4A1A0A087X0R7 540 aa21.89■■□□□ 1.09
ACTR3-208ENST00000535589 U2SURPO15042 1029 aaKnown RBP21.89■■□□□ 1.09
ACTR3-208ENST00000535589 SLIT3O75094 1523 aa21.89■■□□□ 1.09
ACTR3-208ENST00000535589 MAP3K19Q56UN5 1328 aa21.88■■□□□ 1.09
ACTR3-208ENST00000535589 AEBP2Q6ZN18 517 aaPredicted RBP21.88■■□□□ 1.09
ACTR3-208ENST00000535589 DDX17Q92841 729 aaKnown RBP21.88■■□□□ 1.09
ACTR3-208ENST00000535589 RUNDC1Q96C34 613 aa21.88■■□□□ 1.09
ACTR3-208ENST00000535589 KIF24Q5T7B8 1368 aa21.88■■□□□ 1.09
ACTR3-208ENST00000535589 NFAT5O94916 1531 aa21.87■■□□□ 1.09
ACTR3-208ENST00000535589 IL13P35225 146 aa21.87■■□□□ 1.09
ACTR3-208ENST00000535589 KCNH5Q8NCM2 988 aa21.87■■□□□ 1.09
ACTR3-208ENST00000535589 LMOD2Q6P5Q4 547 aa21.86■■□□□ 1.09
ACTR3-208ENST00000535589 FLT4P35916 1363 aa21.86■■□□□ 1.09
ACTR3-208ENST00000535589 USP19O94966 1318 aa21.86■■□□□ 1.09
ACTR3-208ENST00000535589 TNS3Q68CZ2 1445 aa21.86■■□□□ 1.09
ACTR3-208ENST00000535589 SALL2Q9Y467 1007 aaPredicted RBP21.85■■□□□ 1.09
ACTR3-208ENST00000535589 LTN1O94822 1766 aa21.85■■□□□ 1.09
ACTR3-208ENST00000535589 APAF1O14727 1248 aa21.85■■□□□ 1.09
ACTR3-208ENST00000535589 NGEFQ8N5V2 710 aa21.85■■□□□ 1.09
ACTR3-208ENST00000535589 NHSL1Q5SYE7 1610 aa21.84■■□□□ 1.09
ACTR3-208ENST00000535589 AMPHP49418 695 aa21.84■■□□□ 1.09
ACTR3-208ENST00000535589 PNNQ9H307 717 aaKnown RBP21.84■■□□□ 1.09
ACTR3-208ENST00000535589 IQSEC2Q5JU85 1478 aa21.83■■□□□ 1.09
ACTR3-208ENST00000535589 RTL1A6NKG5 1358 aa21.82■■□□□ 1.08
ACTR3-208ENST00000535589 PDE3BQ13370 1112 aa21.82■■□□□ 1.08
ACTR3-208ENST00000535589 EIF4A2Q14240 407 aaKnown RBP21.82■■□□□ 1.08
ACTR3-208ENST00000535589 HSP90AB2PQ58FF8 381 aa21.82■■□□□ 1.08
ACTR3-208ENST00000535589 SOS2Q07890 1332 aaPredicted RBP21.82■■□□□ 1.08
ACTR3-208ENST00000535589 SPATA31A3Q5VYP0 1347 aa21.82■■□□□ 1.08
ACTR3-208ENST00000535589 PHRF1Q9P1Y6 1649 aaKnown RBP21.82■■□□□ 1.08
ACTR3-208ENST00000535589 FCHSD2O94868 740 aa21.81■■□□□ 1.08
ACTR3-208ENST00000535589 ARHGEF10O15013 1369 aa21.81■■□□□ 1.08
ACTR3-208ENST00000535589 MED1Q15648 1581 aaPredicted RBP21.81■■□□□ 1.08
ACTR3-208ENST00000535589 GCP02774 474 aa21.8■■□□□ 1.08
ACTR3-208ENST00000535589 PLEKHF1Q96S99 279 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms