RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 PMFBP1Q8TBY8 1022 aa18.55■□□□□ 0.56
CHFR-210ENST00000535527 PPIP5K1Q6PFW1 1433 aa18.55■□□□□ 0.56
CHFR-210ENST00000535527 FOXO3O43524 673 aa18.53■□□□□ 0.56
CHFR-210ENST00000535527 HSPA5P11021 654 aaKnown RBP18.53■□□□□ 0.56
CHFR-210ENST00000535527 PHF8Q9UPP1 1060 aa18.53■□□□□ 0.56
CHFR-210ENST00000535527 PIK3C2AO00443 1686 aa18.53■□□□□ 0.56
CHFR-210ENST00000535527 POLR3AO14802 1390 aaPredicted RBP18.53■□□□□ 0.56
CHFR-210ENST00000535527 EVC2Q86UK5 1308 aa18.51■□□□□ 0.55
CHFR-210ENST00000535527 SRPK2P78362 688 aaKnown RBP18.51■□□□□ 0.55
CHFR-210ENST00000535527 PHRF1Q9P1Y6 1649 aaKnown RBP18.51■□□□□ 0.55
CHFR-210ENST00000535527 GJD4Q96KN9 370 aaPredicted RBP18.5■□□□□ 0.55
CHFR-210ENST00000535527 BCL9LQ86UU0 1499 aa18.5■□□□□ 0.55
CHFR-210ENST00000535527 C11orf95C9JLR9 678 aaPredicted RBP18.48■□□□□ 0.55
CHFR-210ENST00000535527 TNS3Q68CZ2 1445 aa18.48■□□□□ 0.55
CHFR-210ENST00000535527 SSH2Q76I76 1423 aa18.48■□□□□ 0.55
CHFR-210ENST00000535527 NPHP3Q7Z494 1330 aa18.48■□□□□ 0.55
CHFR-210ENST00000535527 PLEKHG3A1L390 1219 aa18.47■□□□□ 0.55
CHFR-210ENST00000535527 BLMP54132 1417 aaPredicted RBP18.47■□□□□ 0.55
CHFR-210ENST00000535527 CPSF1Q10570 1443 aaKnown RBP18.47■□□□□ 0.55
CHFR-210ENST00000535527 ACEP12821 1306 aa18.47■□□□□ 0.55
CHFR-210ENST00000535527 CCDC61Q9Y6R9 512 aa18.46■□□□□ 0.55
CHFR-210ENST00000535527 USP54Q70EL1 1684 aa18.46■□□□□ 0.55
CHFR-210ENST00000535527 USP6P35125 1406 aa18.46■□□□□ 0.55
CHFR-210ENST00000535527 CABP1Q9NZU7 370 aa18.45■□□□□ 0.54
CHFR-210ENST00000535527 EIF4G2P78344 907 aaKnown RBP eCLIP18.44■□□□□ 0.54
CHFR-210ENST00000535527 KRT28Q7Z3Y7 464 aa18.44■□□□□ 0.54
CHFR-210ENST00000535527 SPATA31A3Q5VYP0 1347 aa18.44■□□□□ 0.54
CHFR-210ENST00000535527 A0A1W2PP64 1363 aa18.42■□□□□ 0.54
CHFR-210ENST00000535527 SBNO1A3KN83 1393 aa18.42■□□□□ 0.54
CHFR-210ENST00000535527 KIF20BQ96Q89 1820 aa18.42■□□□□ 0.54
CHFR-210ENST00000535527 SF3B2Q13435 895 aaKnown RBP18.42■□□□□ 0.54
CHFR-210ENST00000535527 UNC5CLQ8IV45 518 aa18.42■□□□□ 0.54
CHFR-210ENST00000535527 SLC12A5Q9H2X9 1139 aa18.42■□□□□ 0.54
CHFR-210ENST00000535527 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.41■□□□□ 0.54
CHFR-210ENST00000535527 PLCH1Q4KWH8 1693 aa18.4■□□□□ 0.54
CHFR-210ENST00000535527 NGDNQ8NEJ9 315 aaKnown RBP18.39■□□□□ 0.53
CHFR-210ENST00000535527 LRP5O75197 1615 aa18.38■□□□□ 0.53
CHFR-210ENST00000535527 TMF1P82094 1093 aa18.38■□□□□ 0.53
CHFR-210ENST00000535527 SLIT2O94813 1529 aa18.38■□□□□ 0.53
CHFR-210ENST00000535527 PUS7Q96PZ0 661 aaKnown RBP18.37■□□□□ 0.53
CHFR-210ENST00000535527 SLIT3O75094 1523 aa18.37■□□□□ 0.53
CHFR-210ENST00000535527 PSME1Q06323 249 aa18.36■□□□□ 0.53
CHFR-210ENST00000535527 DEFB132Q7Z7B7 95 aa18.36■□□□□ 0.53
CHFR-210ENST00000535527 NRAPQ86VF7 1730 aa18.36■□□□□ 0.53
CHFR-210ENST00000535527 GLI3P10071 1580 aa18.35■□□□□ 0.53
CHFR-210ENST00000535527 KIF7Q2M1P5 1343 aa18.35■□□□□ 0.53
CHFR-210ENST00000535527 CABLES1Q8TDN4 633 aa18.35■□□□□ 0.53
CHFR-210ENST00000535527 ANKRD26Q9UPS8 1709 aa18.35■□□□□ 0.53
CHFR-210ENST00000535527 KTN1Q86UP2 1357 aaKnown RBP18.34■□□□□ 0.53
CHFR-210ENST00000535527 ONECUT3O60422 494 aaPredicted RBP18.34■□□□□ 0.53
CHFR-210ENST00000535527 ANKRD36BQ8N2N9 1353 aa18.33■□□□□ 0.53
CHFR-210ENST00000535527 SEPT12Q8IYM1 358 aa18.33■□□□□ 0.52
CHFR-210ENST00000535527 TMC1Q8TDI8 760 aa18.33■□□□□ 0.52
CHFR-210ENST00000535527 NFAT5O94916 1531 aa18.33■□□□□ 0.52
CHFR-210ENST00000535527 LTN1O94822 1766 aa18.32■□□□□ 0.52
CHFR-210ENST00000535527 COL18A1P39060 1754 aa18.32■□□□□ 0.52
CHFR-210ENST00000535527 RGPD5Q99666 1765 aa18.32■□□□□ 0.52
CHFR-210ENST00000535527 NINLQ9Y2I6 1382 aa18.32■□□□□ 0.52
CHFR-210ENST00000535527 LMO7Q8WWI1 1683 aa18.32■□□□□ 0.52
CHFR-210ENST00000535527 TTC21BQ7Z4L5 1316 aa18.32■□□□□ 0.52
CHFR-210ENST00000535527 PLEKHG5O94827 1062 aa18.32■□□□□ 0.52
CHFR-210ENST00000535527 VPS72Q15906 364 aa18.32■□□□□ 0.52
CHFR-210ENST00000535527 NUTM2GQ5VZR2 741 aa18.32■□□□□ 0.52
CHFR-210ENST00000535527 EDC4Q6P2E9 1401 aaKnown RBP18.32■□□□□ 0.52
CHFR-210ENST00000535527 ARHGEF10O15013 1369 aa18.31■□□□□ 0.52
CHFR-210ENST00000535527 WASHC2AQ641Q2 1341 aa18.31■□□□□ 0.52
CHFR-210ENST00000535527 BRWD3Q6RI45 1802 aa18.31■□□□□ 0.52
CHFR-210ENST00000535527 OVOS2A0A0J9YW53 1432 aa18.31■□□□□ 0.52
CHFR-210ENST00000535527 OVOS2Q6IE36 1432 aa18.31■□□□□ 0.52
CHFR-210ENST00000535527 CCDC7Q96M83 1385 aa18.3■□□□□ 0.52
CHFR-210ENST00000535527 USP19O94966 1318 aa18.3■□□□□ 0.52
CHFR-210ENST00000535527 CARD14Q9BXL6 1004 aa18.3■□□□□ 0.52
CHFR-210ENST00000535527 PAK3O75914 559 aaPredicted RBP18.29■□□□□ 0.52
CHFR-210ENST00000535527 KRT27Q7Z3Y8 459 aa18.29■□□□□ 0.52
CHFR-210ENST00000535527 NWD2Q9ULI1 1742 aa18.29■□□□□ 0.52
CHFR-210ENST00000535527 COL14A1Q05707 1796 aaKnown RBP18.28■□□□□ 0.52
CHFR-210ENST00000535527 BAG6P46379 1132 aa18.28■□□□□ 0.52
CHFR-210ENST00000535527 LMOD2Q6P5Q4 547 aa18.28■□□□□ 0.52
CHFR-210ENST00000535527 NME9Q86XW9 330 aa18.28■□□□□ 0.52
CHFR-210ENST00000535527 NSD3Q9BZ95 1437 aa18.28■□□□□ 0.52
CHFR-210ENST00000535527 BRD4O60885 1362 aaPredicted RBP18.28■□□□□ 0.52
CHFR-210ENST00000535527 POLR3GLQ9BT43 218 aa18.27■□□□□ 0.52
CHFR-210ENST00000535527 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.26■□□□□ 0.51
CHFR-210ENST00000535527 HAP1P54257 671 aaPredicted RBP18.25■□□□□ 0.51
CHFR-210ENST00000535527 PEAK1Q9H792 1746 aa18.25■□□□□ 0.51
CHFR-210ENST00000535527 USP31Q70CQ4 1352 aa18.25■□□□□ 0.51
CHFR-210ENST00000535527 CCDC9Q9Y3X0 531 aaKnown RBP18.24■□□□□ 0.51
CHFR-210ENST00000535527 TTC21AQ8NDW8 1320 aa18.23■□□□□ 0.51
CHFR-210ENST00000535527 PSDA5PKW4 1024 aaPredicted RBP18.23■□□□□ 0.51
CHFR-210ENST00000535527 SLC24A1O60721 1099 aa18.23■□□□□ 0.51
CHFR-210ENST00000535527 CDCA8Q53HL2 280 aa18.23■□□□□ 0.51
CHFR-210ENST00000535527 ABTB2Q8N961 1025 aa18.23■□□□□ 0.51
CHFR-210ENST00000535527 ZNF692Q9BU19 519 aaPredicted RBP18.23■□□□□ 0.51
CHFR-210ENST00000535527 HDGFL2Q7Z4V5 671 aaPredicted RBP18.22■□□□□ 0.51
CHFR-210ENST00000535527 TERF2IPQ9NYB0 399 aa18.22■□□□□ 0.51
CHFR-210ENST00000535527 CAMTA1Q9Y6Y1 1673 aa18.21■□□□□ 0.51
CHFR-210ENST00000535527 KIAA0232Q92628 1395 aa18.2■□□□□ 0.5
CHFR-210ENST00000535527 RGPD2P0DJD1 1756 aa18.19■□□□□ 0.5
CHFR-210ENST00000535527 ZEB1P37275 1124 aaPredicted RBP18.19■□□□□ 0.5
CHFR-210ENST00000535527 NLRP6P59044 892 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms