RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 RRS1Q15050 365 aaKnown RBP17.48■□□□□ 0.39
LPCAT3-203ENST00000535479 SHPRHQ149N8 1683 aa17.48■□□□□ 0.39
LPCAT3-203ENST00000535479 ZNF518AQ6AHZ1 1483 aa17.48■□□□□ 0.39
LPCAT3-203ENST00000535479 NCLP19338 710 aaKnown RBP17.48■□□□□ 0.39
LPCAT3-203ENST00000535479 OTUD7AQ8TE49 926 aaPredicted RBP17.48■□□□□ 0.39
LPCAT3-203ENST00000535479 NPATQ14207 1427 aa17.47■□□□□ 0.39
LPCAT3-203ENST00000535479 TNPO1Q92973 898 aaKnown RBP17.47■□□□□ 0.39
LPCAT3-203ENST00000535479 FOXD4L6Q3SYB3 417 aaPredicted RBP17.47■□□□□ 0.39
LPCAT3-203ENST00000535479 FOXD4L3Q6VB84 417 aaPredicted RBP17.47■□□□□ 0.39
LPCAT3-203ENST00000535479 DIAPH1O60610 1272 aaKnown RBP17.46■□□□□ 0.39
LPCAT3-203ENST00000535479 DDX19BQ9UMR2 479 aa17.46■□□□□ 0.39
LPCAT3-203ENST00000535479 SMARCA5O60264 1052 aaPredicted RBP17.46■□□□□ 0.39
LPCAT3-203ENST00000535479 ZBTB40Q9NUA8 1239 aa17.46■□□□□ 0.39
LPCAT3-203ENST00000535479 CHMP5Q9NZZ3 219 aa17.46■□□□□ 0.39
LPCAT3-203ENST00000535479 ERBB4Q15303 1308 aa17.46■□□□□ 0.39
LPCAT3-203ENST00000535479 SSFA2P28290 1259 aa17.45■□□□□ 0.38
LPCAT3-203ENST00000535479 NOL8Q76FK4 1167 aaKnown RBP17.45■□□□□ 0.38
LPCAT3-203ENST00000535479 STAG3Q9UJ98 1225 aa17.45■□□□□ 0.38
LPCAT3-203ENST00000535479 IQSEC2Q5JU85 1478 aa17.45■□□□□ 0.38
LPCAT3-203ENST00000535479 ARID3AQ99856 593 aa17.45■□□□□ 0.38
LPCAT3-203ENST00000535479 MIS18AQ9NYP9 233 aa17.45■□□□□ 0.38
LPCAT3-203ENST00000535479 CHD1LQ86WJ1 897 aa17.44■□□□□ 0.38
LPCAT3-203ENST00000535479 TSHZ3Q63HK5 1081 aa17.44■□□□□ 0.38
LPCAT3-203ENST00000535479 PLEKHG5O94827 1062 aa17.44■□□□□ 0.38
LPCAT3-203ENST00000535479 PKP1Q13835 747 aa17.43■□□□□ 0.38
LPCAT3-203ENST00000535479 CDK19Q9BWU1 502 aa17.43■□□□□ 0.38
LPCAT3-203ENST00000535479 SIRT2Q8IXJ6 389 aa17.43■□□□□ 0.38
LPCAT3-203ENST00000535479 RTEL1-TNFRSF6BF6WH68 1400 aa17.43■□□□□ 0.38
LPCAT3-203ENST00000535479 NME9Q86XW9 330 aa17.42■□□□□ 0.38
LPCAT3-203ENST00000535479 PPRC1Q5VV67 1664 aaKnown RBP17.42■□□□□ 0.38
LPCAT3-203ENST00000535479 C8orf58Q8NAV2 365 aa17.42■□□□□ 0.38
LPCAT3-203ENST00000535479 GAS2L2Q8NHY3 880 aa17.42■□□□□ 0.38
LPCAT3-203ENST00000535479 TBC1D9Q6ZT07 1266 aa17.41■□□□□ 0.38
LPCAT3-203ENST00000535479 L1TD1Q5T7N2 865 aaKnown RBP17.41■□□□□ 0.38
LPCAT3-203ENST00000535479 ZNF692Q9BU19 519 aaPredicted RBP17.41■□□□□ 0.38
LPCAT3-203ENST00000535479 TET3O43151 1660 aa17.41■□□□□ 0.38
LPCAT3-203ENST00000535479 MPNDQ8N594 471 aa17.41■□□□□ 0.38
LPCAT3-203ENST00000535479 AK9Q5TCS8 1911 aa17.4■□□□□ 0.38
LPCAT3-203ENST00000535479 NECTIN2Q92692 538 aa17.4■□□□□ 0.38
LPCAT3-203ENST00000535479 NUCB1Q02818 461 aa17.4■□□□□ 0.38
LPCAT3-203ENST00000535479 SMC5Q8IY18 1101 aa17.4■□□□□ 0.38
LPCAT3-203ENST00000535479 ZNF428Q96B54 188 aa17.4■□□□□ 0.38
LPCAT3-203ENST00000535479 GRPEL1Q9HAV7 217 aa17.4■□□□□ 0.38
LPCAT3-203ENST00000535479 QRICH2Q9H0J4 1663 aa17.4■□□□□ 0.38
LPCAT3-203ENST00000535479 ASXL2Q76L83 1435 aa17.39■□□□□ 0.38
LPCAT3-203ENST00000535479 PNNQ9H307 717 aaKnown RBP17.39■□□□□ 0.37
LPCAT3-203ENST00000535479 ANKRD36BQ8N2N9 1353 aa17.39■□□□□ 0.37
LPCAT3-203ENST00000535479 KIF2CQ99661 725 aa17.39■□□□□ 0.37
LPCAT3-203ENST00000535479 TULP4Q9NRJ4 1543 aa17.39■□□□□ 0.37
LPCAT3-203ENST00000535479 MROH1Q8NDA8 1641 aa17.38■□□□□ 0.37
LPCAT3-203ENST00000535479 KIF1BO60333 1816 aa17.38■□□□□ 0.37
LPCAT3-203ENST00000535479 VGFO15240 615 aaPredicted RBP17.38■□□□□ 0.37
LPCAT3-203ENST00000535479 CCDC27Q2M243 656 aa17.38■□□□□ 0.37
LPCAT3-203ENST00000535479 AEBP1Q8IUX7 1158 aa17.38■□□□□ 0.37
LPCAT3-203ENST00000535479 MBIPQ9NS73 344 aa17.38■□□□□ 0.37
LPCAT3-203ENST00000535479 SLC24A1O60721 1099 aa17.37■□□□□ 0.37
LPCAT3-203ENST00000535479 NPM1P06748 294 aaKnown RBP eCLIP17.37■□□□□ 0.37
LPCAT3-203ENST00000535479 HDAC1Q13547 482 aaPredicted RBP17.37■□□□□ 0.37
LPCAT3-203ENST00000535479 NINLQ9Y2I6 1382 aa17.37■□□□□ 0.37
LPCAT3-203ENST00000535479 POLKQ9UBT6 870 aa17.37■□□□□ 0.37
LPCAT3-203ENST00000535479 STAC3Q96MF2 364 aa17.36■□□□□ 0.37
LPCAT3-203ENST00000535479 FSD2A1L4K1 749 aa17.35■□□□□ 0.37
LPCAT3-203ENST00000535479 ZBTB7BO15156 539 aaPredicted RBP17.35■□□□□ 0.37
LPCAT3-203ENST00000535479 MCM10Q7L590 875 aa17.35■□□□□ 0.37
LPCAT3-203ENST00000535479 VIRMAQ69YN4 1812 aaKnown RBP17.35■□□□□ 0.37
LPCAT3-203ENST00000535479 PPIP5K1Q6PFW1 1433 aa17.35■□□□□ 0.37
LPCAT3-203ENST00000535479 GSPT1P15170 499 aaKnown RBP17.35■□□□□ 0.37
LPCAT3-203ENST00000535479 VAMP4O75379 141 aa17.34■□□□□ 0.37
LPCAT3-203ENST00000535479 MYOM2P54296 1465 aa17.34■□□□□ 0.37
LPCAT3-203ENST00000535479 EFCAB6Q5THR3 1501 aa17.34■□□□□ 0.37
LPCAT3-203ENST00000535479 SHROOM2Q13796 1616 aa17.34■□□□□ 0.37
LPCAT3-203ENST00000535479 MCTP1Q6DN14 999 aa17.34■□□□□ 0.37
LPCAT3-203ENST00000535479 NGEFQ8N5V2 710 aa17.34■□□□□ 0.37
LPCAT3-203ENST00000535479 TERF2IPQ9NYB0 399 aa17.34■□□□□ 0.37
LPCAT3-203ENST00000535479 RBM27Q9P2N5 1060 aaKnown RBP17.34■□□□□ 0.37
LPCAT3-203ENST00000535479 SLC4A10Q6U841 1118 aa17.34■□□□□ 0.37
LPCAT3-203ENST00000535479 RSPH6AQ9H0K4 717 aa17.34■□□□□ 0.37
LPCAT3-203ENST00000535479 IPO8O15397 1037 aaKnown RBP17.33■□□□□ 0.37
LPCAT3-203ENST00000535479 TWISTNBQ3B726 338 aaPredicted RBP17.33■□□□□ 0.37
LPCAT3-203ENST00000535479 TXNDC2Q86VQ3 553 aa17.33■□□□□ 0.37
LPCAT3-203ENST00000535479 ADGRB1O14514 1584 aa17.33■□□□□ 0.36
LPCAT3-203ENST00000535479 HDGFL2Q7Z4V5 671 aaPredicted RBP17.33■□□□□ 0.36
LPCAT3-203ENST00000535479 ZGPATQ8N5A5 531 aaKnown RBP17.33■□□□□ 0.36
LPCAT3-203ENST00000535479 MRPL50Q8N5N7 158 aaKnown RBP17.32■□□□□ 0.36
LPCAT3-203ENST00000535479 F6X3S4 739 aa17.31■□□□□ 0.36
LPCAT3-203ENST00000535479 DDX49Q9Y6V7 483 aaKnown RBP17.31■□□□□ 0.36
LPCAT3-203ENST00000535479 KIF16BQ96L93 1317 aa17.3■□□□□ 0.36
LPCAT3-203ENST00000535479 TRIM44Q96DX7 344 aaPredicted RBP17.3■□□□□ 0.36
LPCAT3-203ENST00000535479 CAVIN1Q6NZI2 390 aaKnown RBP17.3■□□□□ 0.36
LPCAT3-203ENST00000535479 INO80Q9ULG1 1556 aaPredicted RBP17.29■□□□□ 0.36
LPCAT3-203ENST00000535479 KIDINS220Q9ULH0 1771 aa17.29■□□□□ 0.36
LPCAT3-203ENST00000535479 DEPDC5O75140 1603 aa17.29■□□□□ 0.36
LPCAT3-203ENST00000535479 LARP6Q9BRS8 491 aaKnown RBP17.29■□□□□ 0.36
LPCAT3-203ENST00000535479 GLI2P10070 1586 aa17.29■□□□□ 0.36
LPCAT3-203ENST00000535479 CAMSAP1Q5T5Y3 1602 aa17.29■□□□□ 0.36
LPCAT3-203ENST00000535479 SBNO2Q9Y2G9 1366 aa17.28■□□□□ 0.36
LPCAT3-203ENST00000535479 FOXO3O43524 673 aa17.28■□□□□ 0.36
LPCAT3-203ENST00000535479 ABCC11Q96J66 1382 aa17.28■□□□□ 0.36
LPCAT3-203ENST00000535479 ESPNB1AK53 854 aa17.27■□□□□ 0.36
LPCAT3-203ENST00000535479 MRE11P49959 708 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 1380.8 ms