RNA–Protein interactions for RNA: ENST00000535237.2

GOPC-203, Transcript of golgi associated PDZ and coiled-coil motif containing, humanhuman

TSL 1 (best) BASIC

Gene GOPC, Length 4,460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GOPC-203ENST00000535237 PRKAR2BP31323 418 aa17.99■□□□□ 0.47
GOPC-203ENST00000535237 NOM1Q5C9Z4 860 aaKnown RBP17.99■□□□□ 0.47
GOPC-203ENST00000535237 WDR33Q9C0J8 1336 aaKnown RBP17.99■□□□□ 0.47
GOPC-203ENST00000535237 CLSTN1O94985 981 aa17.98■□□□□ 0.47
GOPC-203ENST00000535237 PDE4CQ08493 712 aa17.98■□□□□ 0.47
GOPC-203ENST00000535237 TEFQ10587 303 aa17.98■□□□□ 0.47
GOPC-203ENST00000535237 IPO7O95373 1038 aaKnown RBP17.98■□□□□ 0.47
GOPC-203ENST00000535237 TWISTNBQ3B726 338 aaPredicted RBP17.98■□□□□ 0.47
GOPC-203ENST00000535237 SSFA2P28290 1259 aa17.98■□□□□ 0.47
GOPC-203ENST00000535237 NAT10Q9H0A0 1025 aaKnown RBP17.98■□□□□ 0.47
GOPC-203ENST00000535237 MAPK8IP2Q13387 824 aaPredicted RBP17.97■□□□□ 0.47
GOPC-203ENST00000535237 SURF6O75683 361 aaKnown RBP17.97■□□□□ 0.47
GOPC-203ENST00000535237 RAPGEF3O95398 923 aa17.97■□□□□ 0.47
GOPC-203ENST00000535237 G3BP1Q13283 466 aaKnown RBP eCLIP17.96■□□□□ 0.47
GOPC-203ENST00000535237 PDCP20941 246 aa17.96■□□□□ 0.47
GOPC-203ENST00000535237 KINO60870 393 aaKnown RBP17.96■□□□□ 0.46
GOPC-203ENST00000535237 HSP90AB4PQ58FF6 505 aa17.96■□□□□ 0.46
GOPC-203ENST00000535237 DUSP27Q5VZP5 1158 aa17.96■□□□□ 0.46
GOPC-203ENST00000535237 SYNE3Q6ZMZ3 975 aa17.96■□□□□ 0.46
GOPC-203ENST00000535237 CWC15Q9P013 229 aaKnown RBP17.96■□□□□ 0.46
GOPC-203ENST00000535237 UBTFL1P0CB47 393 aaPredicted RBP17.95■□□□□ 0.46
GOPC-203ENST00000535237 ZHX1Q9UKY1 873 aaPredicted RBP17.95■□□□□ 0.46
GOPC-203ENST00000535237 TMEM57Q8N5G2 664 aa17.95■□□□□ 0.46
GOPC-203ENST00000535237 TIAM1Q13009 1591 aa17.95■□□□□ 0.46
GOPC-203ENST00000535237 CT47B1P0C2W7 299 aaPredicted RBP17.95■□□□□ 0.46
GOPC-203ENST00000535237 PDILTQ8N807 584 aa17.95■□□□□ 0.46
GOPC-203ENST00000535237 NCOA1Q15788 1441 aa17.95■□□□□ 0.46
GOPC-203ENST00000535237 SMC2O95347 1197 aa17.94■□□□□ 0.46
GOPC-203ENST00000535237 TRIM29Q14134 588 aa17.94■□□□□ 0.46
GOPC-203ENST00000535237 RARSP54136 660 aaKnown RBP17.94■□□□□ 0.46
GOPC-203ENST00000535237 IGHDP01880 384 aa17.94■□□□□ 0.46
GOPC-203ENST00000535237 CEBPZQ03701 1054 aaKnown RBP17.94■□□□□ 0.46
GOPC-203ENST00000535237 TBC1D32Q96NH3 1257 aa17.93■□□□□ 0.46
GOPC-203ENST00000535237 ACBD3Q9H3P7 528 aa17.93■□□□□ 0.46
GOPC-203ENST00000535237 NEXNQ0ZGT2 675 aa17.93■□□□□ 0.46
GOPC-203ENST00000535237 CNTROBQ8N137 903 aa17.93■□□□□ 0.46
GOPC-203ENST00000535237 GNAI3P08754 354 aa17.93■□□□□ 0.46
GOPC-203ENST00000535237 AKAP17AQ02040 695 aaKnown RBP17.92■□□□□ 0.46
GOPC-203ENST00000535237 TNMDQ9H2S6 317 aa17.92■□□□□ 0.46
GOPC-203ENST00000535237 DNMBPQ6XZF7 1577 aa17.92■□□□□ 0.46
GOPC-203ENST00000535237 ERICH4A6NGS2 130 aa17.92■□□□□ 0.46
GOPC-203ENST00000535237 CLASRPQ8N2M8 674 aaKnown RBP17.92■□□□□ 0.46
GOPC-203ENST00000535237 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.92■□□□□ 0.46
GOPC-203ENST00000535237 SYNJ2O15056 1496 aa17.92■□□□□ 0.46
GOPC-203ENST00000535237 PSMA5P28066 241 aa17.92■□□□□ 0.46
GOPC-203ENST00000535237 ANKRD20A12PQ8NF67 263 aa17.91■□□□□ 0.46
GOPC-203ENST00000535237 FILIP1Q7Z7B0 1213 aa17.91■□□□□ 0.46
GOPC-203ENST00000535237 HOOK1Q9UJC3 728 aaKnown RBP17.91■□□□□ 0.46
GOPC-203ENST00000535237 PATL2C9JE40 543 aaKnown RBP17.91■□□□□ 0.46
GOPC-203ENST00000535237 ERBINQ96RT1 1412 aa17.9■□□□□ 0.46
GOPC-203ENST00000535237 KRT85P78386 507 aa17.9■□□□□ 0.46
GOPC-203ENST00000535237 PCMTD1Q96MG8 357 aaPredicted RBP17.9■□□□□ 0.46
GOPC-203ENST00000535237 TTLL5Q6EMB2 1281 aa17.89■□□□□ 0.45
GOPC-203ENST00000535237 LRPPRCP42704 1394 aaKnown RBP17.89■□□□□ 0.45
GOPC-203ENST00000535237 APPP05067 770 aa17.89■□□□□ 0.45
GOPC-203ENST00000535237 SKIDA1Q1XH10 827 aa17.88■□□□□ 0.45
GOPC-203ENST00000535237 C8orf34Q49A92 452 aa17.88■□□□□ 0.45
GOPC-203ENST00000535237 UPF3BQ9BZI7 483 aaKnown RBP17.88■□□□□ 0.45
GOPC-203ENST00000535237 TRDNQ13061 729 aa17.88■□□□□ 0.45
GOPC-203ENST00000535237 LARP1BQ659C4 914 aaKnown RBP17.88■□□□□ 0.45
GOPC-203ENST00000535237 USP25Q9UHP3 1055 aa17.88■□□□□ 0.45
GOPC-203ENST00000535237 ANKRD30BQ9BXX2 1392 aa17.88■□□□□ 0.45
GOPC-203ENST00000535237 ZNF608Q9ULD9 1512 aaPredicted RBP17.88■□□□□ 0.45
GOPC-203ENST00000535237 SSH1Q8WYL5 1049 aa17.88■□□□□ 0.45
GOPC-203ENST00000535237 RUFY1Q96T51 708 aa17.88■□□□□ 0.45
GOPC-203ENST00000535237 FSD1Q9BTV5 496 aa17.88■□□□□ 0.45
GOPC-203ENST00000535237 GNAI2P04899 355 aa17.87■□□□□ 0.45
GOPC-203ENST00000535237 LRRFIP1Q32MZ4 808 aaKnown RBP17.87■□□□□ 0.45
GOPC-203ENST00000535237 H0YHG0 523 aa17.87■□□□□ 0.45
GOPC-203ENST00000535237 SLC4A2P04920 1241 aa17.87■□□□□ 0.45
GOPC-203ENST00000535237 OLFM4Q6UX06 510 aa17.87■□□□□ 0.45
GOPC-203ENST00000535237 LEKR1Q6ZMV7 388 aa17.87■□□□□ 0.45
GOPC-203ENST00000535237 BAG4O95429 457 aaKnown RBP17.86■□□□□ 0.45
GOPC-203ENST00000535237 CYP46A1Q9Y6A2 500 aa17.86■□□□□ 0.45
GOPC-203ENST00000535237 FAM177A1Q8N128 213 aaPredicted RBP17.86■□□□□ 0.45
GOPC-203ENST00000535237 C1orf141Q5JVX7 400 aa17.85■□□□□ 0.45
GOPC-203ENST00000535237 NUP62CLQ9H1M0 184 aa17.85■□□□□ 0.45
GOPC-203ENST00000535237 AK7Q96M32 723 aa17.85■□□□□ 0.45
GOPC-203ENST00000535237 NKTRP30414 1462 aaKnown RBP17.85■□□□□ 0.45
GOPC-203ENST00000535237 LRRCC1Q9C099 1032 aa17.85■□□□□ 0.45
GOPC-203ENST00000535237 CGNQ9P2M7 1197 aaKnown RBP17.85■□□□□ 0.45
GOPC-203ENST00000535237 STK3Q13188 491 aa17.84■□□□□ 0.45
GOPC-203ENST00000535237 KLHL40Q2TBA0 621 aa17.84■□□□□ 0.45
GOPC-203ENST00000535237 AEBP1Q8IUX7 1158 aa17.84■□□□□ 0.45
GOPC-203ENST00000535237 MAP4K4O95819 1239 aaPredicted RBP17.83■□□□□ 0.45
GOPC-203ENST00000535237 DYNC1I1O14576 645 aa17.83■□□□□ 0.44
GOPC-203ENST00000535237 DDX58O95786 925 aaKnown RBP17.83■□□□□ 0.44
GOPC-203ENST00000535237 RALYLQ86SE5 291 aaKnown RBP17.83■□□□□ 0.44
GOPC-203ENST00000535237 NFXL1Q6ZNB6 911 aa17.83■□□□□ 0.44
GOPC-203ENST00000535237 MARCH6O60337 910 aa17.82■□□□□ 0.44
GOPC-203ENST00000535237 FERMT3Q86UX7 667 aa17.82■□□□□ 0.44
GOPC-203ENST00000535237 GDPD2Q9HCC8 539 aa17.82■□□□□ 0.44
GOPC-203ENST00000535237 RRAGDQ9NQL2 400 aaPredicted RBP17.82■□□□□ 0.44
GOPC-203ENST00000535237 TMPOP42166 694 aaKnown RBP17.82■□□□□ 0.44
GOPC-203ENST00000535237 NEUROD6Q96NK8 337 aa17.82■□□□□ 0.44
GOPC-203ENST00000535237 CEP89Q96ST8 783 aa17.82■□□□□ 0.44
GOPC-203ENST00000535237 SCAPERQ9BY12 1400 aa17.82■□□□□ 0.44
GOPC-203ENST00000535237 CCP110O43303 1012 aa17.82■□□□□ 0.44
GOPC-203ENST00000535237 PPP4R3BQ5MIZ7 849 aa17.82■□□□□ 0.44
GOPC-203ENST00000535237 RBM27Q9P2N5 1060 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms