RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, humanhuman

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-238ENST00000534647 PRR36Q9H6K5 1346 aa16.94■□□□□ 0.3
CTNND1-238ENST00000534647 TULP4Q9NRJ4 1543 aa16.92■□□□□ 0.3
CTNND1-238ENST00000534647 SRCAPQ6ZRS2 3230 aa16.92■□□□□ 0.3
CTNND1-238ENST00000534647 SF3B2Q13435 895 aaKnown RBP16.92■□□□□ 0.3
CTNND1-238ENST00000534647 HIRIP3Q9BW71 556 aaPredicted RBP16.92■□□□□ 0.3
CTNND1-238ENST00000534647 KDM2AQ9Y2K7 1162 aa16.92■□□□□ 0.3
CTNND1-238ENST00000534647 CCDC9Q9Y3X0 531 aaKnown RBP16.92■□□□□ 0.3
CTNND1-238ENST00000534647 MINK1Q8N4C8 1332 aaPredicted RBP16.92■□□□□ 0.3
CTNND1-238ENST00000534647 PLCH1Q4KWH8 1693 aa16.91■□□□□ 0.3
CTNND1-238ENST00000534647 ABCA3Q99758 1704 aa16.91■□□□□ 0.3
CTNND1-238ENST00000534647 TRPM3Q9HCF6 1732 aaPredicted RBP16.91■□□□□ 0.3
CTNND1-238ENST00000534647 DEFB132Q7Z7B7 95 aa16.9■□□□□ 0.3
CTNND1-238ENST00000534647 BTG4Q9NY30 223 aa16.9■□□□□ 0.3
CTNND1-238ENST00000534647 BRWD3Q6RI45 1802 aa16.9■□□□□ 0.3
CTNND1-238ENST00000534647 ALS2Q96Q42 1657 aa16.89■□□□□ 0.29
CTNND1-238ENST00000534647 PLEKHG5O94827 1062 aa16.88■□□□□ 0.29
CTNND1-238ENST00000534647 NGDNQ8NEJ9 315 aaKnown RBP16.88■□□□□ 0.29
CTNND1-238ENST00000534647 TAOK2Q9UL54 1235 aa16.88■□□□□ 0.29
CTNND1-238ENST00000534647 SPATA31A5Q5VU36 1347 aa16.87■□□□□ 0.29
CTNND1-238ENST00000534647 SPATA31A7Q8IWB4 1347 aa16.87■□□□□ 0.29
CTNND1-238ENST00000534647 COL14A1Q05707 1796 aaKnown RBP16.87■□□□□ 0.29
CTNND1-238ENST00000534647 SLC4A2P04920 1241 aa16.86■□□□□ 0.29
CTNND1-238ENST00000534647 FAM98CQ17RN3 349 aaKnown RBP16.86■□□□□ 0.29
CTNND1-238ENST00000534647 NUDT16Q96DE0 195 aaKnown RBP16.86■□□□□ 0.29
CTNND1-238ENST00000534647 NRAPQ86VF7 1730 aa16.85■□□□□ 0.29
CTNND1-238ENST00000534647 BAG6P46379 1132 aa16.84■□□□□ 0.29
CTNND1-238ENST00000534647 PAK3O75914 559 aaPredicted RBP16.83■□□□□ 0.28
CTNND1-238ENST00000534647 ATP7BP35670 1465 aa16.83■□□□□ 0.28
CTNND1-238ENST00000534647 PRDM11Q9NQV5 511 aa16.83■□□□□ 0.28
CTNND1-238ENST00000534647 POLR3AO14802 1390 aaPredicted RBP16.82■□□□□ 0.28
CTNND1-238ENST00000534647 PLEKHG3A1L390 1219 aa16.82■□□□□ 0.28
CTNND1-238ENST00000534647 CDK19Q9BWU1 502 aa16.82■□□□□ 0.28
CTNND1-238ENST00000534647 CCDC61Q9Y6R9 512 aa16.82■□□□□ 0.28
CTNND1-238ENST00000534647 CRYBG1Q9Y4K1 1723 aa16.82■□□□□ 0.28
CTNND1-238ENST00000534647 A0A0G2JS52 829 aa16.81■□□□□ 0.28
CTNND1-238ENST00000534647 MYCNP04198 464 aaPredicted RBP16.81■□□□□ 0.28
CTNND1-238ENST00000534647 MYT1Q01538 1121 aa16.81■□□□□ 0.28
CTNND1-238ENST00000534647 SPATA31A1Q5TZJ5 1347 aa16.8■□□□□ 0.28
CTNND1-238ENST00000534647 NBPF8Q3BBV2 869 aa16.8■□□□□ 0.28
CTNND1-238ENST00000534647 DISP2A7MBM2 1401 aa16.79■□□□□ 0.28
CTNND1-238ENST00000534647 ARHGEF28Q8N1W1 1705 aaKnown RBP16.79■□□□□ 0.28
CTNND1-238ENST00000534647 KIAA0232Q92628 1395 aa16.79■□□□□ 0.28
CTNND1-238ENST00000534647 ACEP12821 1306 aa16.78■□□□□ 0.28
CTNND1-238ENST00000534647 ITSN1Q15811 1721 aa16.78■□□□□ 0.28
CTNND1-238ENST00000534647 THSD7AQ9UPZ6 1657 aa16.78■□□□□ 0.28
CTNND1-238ENST00000534647 EN1Q05925 392 aaPredicted RBP16.76■□□□□ 0.27
CTNND1-238ENST00000534647 FAM196AQ6ZSG2 479 aa16.76■□□□□ 0.27
CTNND1-238ENST00000534647 BARGINQ6ZT62 677 aa16.76■□□□□ 0.27
CTNND1-238ENST00000534647 LRP5O75197 1615 aa16.76■□□□□ 0.27
CTNND1-238ENST00000534647 CHRNA2Q15822 529 aa16.75■□□□□ 0.27
CTNND1-238ENST00000534647 KIAA1210Q9ULL0 1709 aa16.75■□□□□ 0.27
CTNND1-238ENST00000534647 CPDO75976 1380 aa16.75■□□□□ 0.27
CTNND1-238ENST00000534647 ZC3H6P61129 1189 aaKnown RBP16.74■□□□□ 0.27
CTNND1-238ENST00000534647 MAPK8IP2Q13387 824 aaPredicted RBP16.74■□□□□ 0.27
CTNND1-238ENST00000534647 FAM182BQ5T319 152 aa16.74■□□□□ 0.27
CTNND1-238ENST00000534647 BRD4O60885 1362 aaPredicted RBP16.74■□□□□ 0.27
CTNND1-238ENST00000534647 USP19O94966 1318 aa16.73■□□□□ 0.27
CTNND1-238ENST00000534647 NBPF1Q3BBV0 1214 aa16.73■□□□□ 0.27
CTNND1-238ENST00000534647 ABTB2Q8N961 1025 aa16.73■□□□□ 0.27
CTNND1-238ENST00000534647 RGPD1P0DJD0 1748 aa16.73■□□□□ 0.27
CTNND1-238ENST00000534647 TOPAZ1Q8N9V7 1692 aa16.72■□□□□ 0.27
CTNND1-238ENST00000534647 PSDA5PKW4 1024 aaPredicted RBP16.72■□□□□ 0.27
CTNND1-238ENST00000534647 NUTM2GQ5VZR2 741 aa16.72■□□□□ 0.27
CTNND1-238ENST00000534647 CAMKK2Q96RR4 588 aa16.72■□□□□ 0.27
CTNND1-238ENST00000534647 STRN4Q9NRL3 753 aa16.72■□□□□ 0.27
CTNND1-238ENST00000534647 SSH2Q76I76 1423 aa16.71■□□□□ 0.27
CTNND1-238ENST00000534647 PHRF1Q9P1Y6 1649 aaKnown RBP16.71■□□□□ 0.27
CTNND1-238ENST00000534647 EVA1CP58658 441 aa16.71■□□□□ 0.27
CTNND1-238ENST00000534647 NLRP13Q86W25 1043 aa16.71■□□□□ 0.27
CTNND1-238ENST00000534647 THRAP3Q9Y2W1 955 aaKnown RBP16.71■□□□□ 0.27
CTNND1-238ENST00000534647 PARD3Q8TEW0 1356 aa16.71■□□□□ 0.27
CTNND1-238ENST00000534647 GCP02774 474 aa16.7■□□□□ 0.26
CTNND1-238ENST00000534647 CENPJQ9HC77 1338 aaPredicted RBP16.7■□□□□ 0.26
CTNND1-238ENST00000534647 CAMTA1Q9Y6Y1 1673 aa16.69■□□□□ 0.26
CTNND1-238ENST00000534647 TRIM37O94972 964 aa16.69■□□□□ 0.26
CTNND1-238ENST00000534647 EZH2Q15910 746 aaKnown RBP16.69■□□□□ 0.26
CTNND1-238ENST00000534647 TCP11L2Q8N4U5 519 aa16.69■□□□□ 0.26
CTNND1-238ENST00000534647 SRPK2P78362 688 aaKnown RBP16.68■□□□□ 0.26
CTNND1-238ENST00000534647 PDE3BQ13370 1112 aa16.68■□□□□ 0.26
CTNND1-238ENST00000534647 LARP1Q6PKG0 1096 aaKnown RBP16.68■□□□□ 0.26
CTNND1-238ENST00000534647 PPIP5K1Q6PFW1 1433 aa16.68■□□□□ 0.26
CTNND1-238ENST00000534647 C11orf95C9JLR9 678 aaPredicted RBP16.67■□□□□ 0.26
CTNND1-238ENST00000534647 R3HDM1Q15032 1099 aaKnown RBP16.67■□□□□ 0.26
CTNND1-238ENST00000534647 NRKQ7Z2Y5 1582 aa16.67■□□□□ 0.26
CTNND1-238ENST00000534647 TNS1Q9HBL0 1735 aaKnown RBP16.67■□□□□ 0.26
CTNND1-238ENST00000534647 LMO7Q8WWI1 1683 aa16.66■□□□□ 0.26
CTNND1-238ENST00000534647 APBA3O96018 575 aa16.66■□□□□ 0.26
CTNND1-238ENST00000534647 CABP2Q9NPB3 220 aa16.66■□□□□ 0.26
CTNND1-238ENST00000534647 USP35Q9P2H5 1018 aa16.66■□□□□ 0.26
CTNND1-238ENST00000534647 VSIG10Q8N0Z9 540 aa16.65■□□□□ 0.26
CTNND1-238ENST00000534647 CABP1Q9NZU7 370 aa16.64■□□□□ 0.25
CTNND1-238ENST00000534647 AATKQ6ZMQ8 1374 aa16.64■□□□□ 0.25
CTNND1-238ENST00000534647 USP6P35125 1406 aa16.62■□□□□ 0.25
CTNND1-238ENST00000534647 COL5A2P05997 1499 aaPredicted RBP16.62■□□□□ 0.25
CTNND1-238ENST00000534647 NLRP6P59044 892 aa16.62■□□□□ 0.25
CTNND1-238ENST00000534647 CRB1P82279 1406 aa16.62■□□□□ 0.25
CTNND1-238ENST00000534647 L3MBTL2Q969R5 705 aa16.61■□□□□ 0.25
CTNND1-238ENST00000534647 ZNF692Q9BU19 519 aaPredicted RBP16.61■□□□□ 0.25
CTNND1-238ENST00000534647 NBPF14Q5TI25 921 aa16.6■□□□□ 0.25
CTNND1-238ENST00000534647 EVC2Q86UK5 1308 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms