RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 ACEP12821 1306 aa21.91■■□□□ 1.1
UBXN1-217ENST00000534176 PAK3O75914 559 aaPredicted RBP21.91■■□□□ 1.1
UBXN1-217ENST00000534176 ATAD2Q6PL18 1390 aa21.9■■□□□ 1.1
UBXN1-217ENST00000534176 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.89■■□□□ 1.1
UBXN1-217ENST00000534176 UNC5CLQ8IV45 518 aa21.88■■□□□ 1.09
UBXN1-217ENST00000534176 CABP2Q9NPB3 220 aa21.88■■□□□ 1.09
UBXN1-217ENST00000534176 SLIT2O94813 1529 aa21.88■■□□□ 1.09
UBXN1-217ENST00000534176 ATRNO75882 1429 aa21.88■■□□□ 1.09
UBXN1-217ENST00000534176 ABCA3Q99758 1704 aa21.87■■□□□ 1.09
UBXN1-217ENST00000534176 ZNF692Q9BU19 519 aaPredicted RBP21.87■■□□□ 1.09
UBXN1-217ENST00000534176 PCGF6Q9BYE7 350 aa21.87■■□□□ 1.09
UBXN1-217ENST00000534176 BCL9LQ86UU0 1499 aa21.87■■□□□ 1.09
UBXN1-217ENST00000534176 NWD2Q9ULI1 1742 aa21.86■■□□□ 1.09
UBXN1-217ENST00000534176 PUS7Q96PZ0 661 aaKnown RBP21.86■■□□□ 1.09
UBXN1-217ENST00000534176 CABLES1Q8TDN4 633 aa21.83■■□□□ 1.09
UBXN1-217ENST00000534176 CABP1Q9NZU7 370 aa21.83■■□□□ 1.09
UBXN1-217ENST00000534176 NLRP13Q86W25 1043 aa21.82■■□□□ 1.08
UBXN1-217ENST00000534176 ABTB2Q8N961 1025 aa21.82■■□□□ 1.08
UBXN1-217ENST00000534176 GJD4Q96KN9 370 aaPredicted RBP21.82■■□□□ 1.08
UBXN1-217ENST00000534176 USP6P35125 1406 aa21.8■■□□□ 1.08
UBXN1-217ENST00000534176 COL14A1Q05707 1796 aaKnown RBP21.8■■□□□ 1.08
UBXN1-217ENST00000534176 VPS72Q15906 364 aa21.8■■□□□ 1.08
UBXN1-217ENST00000534176 RGS12O14924 1447 aa21.8■■□□□ 1.08
UBXN1-217ENST00000534176 CRYBG1Q9Y4K1 1723 aa21.78■■□□□ 1.08
UBXN1-217ENST00000534176 PLCH1Q4KWH8 1693 aa21.78■■□□□ 1.08
UBXN1-217ENST00000534176 NINLQ9Y2I6 1382 aa21.77■■□□□ 1.08
UBXN1-217ENST00000534176 FAM83GA6ND36 823 aa21.77■■□□□ 1.08
UBXN1-217ENST00000534176 PRDM11Q9NQV5 511 aa21.77■■□□□ 1.08
UBXN1-217ENST00000534176 TTC21AQ8NDW8 1320 aa21.77■■□□□ 1.07
UBXN1-217ENST00000534176 USP19O94966 1318 aa21.76■■□□□ 1.07
UBXN1-217ENST00000534176 PHRF1Q9P1Y6 1649 aaKnown RBP21.75■■□□□ 1.07
UBXN1-217ENST00000534176 CPDO75976 1380 aa21.74■■□□□ 1.07
UBXN1-217ENST00000534176 CPSF1Q10570 1443 aaKnown RBP21.74■■□□□ 1.07
UBXN1-217ENST00000534176 CCER1Q8TC90 406 aaPredicted RBP21.74■■□□□ 1.07
UBXN1-217ENST00000534176 SSH2Q76I76 1423 aa21.73■■□□□ 1.07
UBXN1-217ENST00000534176 PLEKHG5O94827 1062 aa21.73■■□□□ 1.07
UBXN1-217ENST00000534176 BTG4Q9NY30 223 aa21.73■■□□□ 1.07
UBXN1-217ENST00000534176 CDCA8Q53HL2 280 aa21.72■■□□□ 1.07
UBXN1-217ENST00000534176 HDGFL2Q7Z4V5 671 aaPredicted RBP21.72■■□□□ 1.07
UBXN1-217ENST00000534176 TERF2IPQ9NYB0 399 aa21.72■■□□□ 1.07
UBXN1-217ENST00000534176 AKAP12Q02952 1782 aa21.71■■□□□ 1.07
UBXN1-217ENST00000534176 ST20-MTHFSA0A0A6YYL1 179 aa21.71■■□□□ 1.07
UBXN1-217ENST00000534176 NLRP6P59044 892 aa21.71■■□□□ 1.07
UBXN1-217ENST00000534176 CCDC9Q9Y3X0 531 aaKnown RBP21.71■■□□□ 1.07
UBXN1-217ENST00000534176 KTN1Q86UP2 1357 aaKnown RBP21.71■■□□□ 1.07
UBXN1-217ENST00000534176 KIAA0232Q92628 1395 aa21.71■■□□□ 1.07
UBXN1-217ENST00000534176 ONECUT3O60422 494 aaPredicted RBP21.7■■□□□ 1.06
UBXN1-217ENST00000534176 GCP02774 474 aa21.7■■□□□ 1.06
UBXN1-217ENST00000534176 KCNH5Q8NCM2 988 aa21.7■■□□□ 1.06
UBXN1-217ENST00000534176 USP47Q96K76 1375 aa21.7■■□□□ 1.06
UBXN1-217ENST00000534176 TMF1P82094 1093 aa21.69■■□□□ 1.06
UBXN1-217ENST00000534176 UPF1Q92900 1129 aaKnown RBP eCLIP21.69■■□□□ 1.06
UBXN1-217ENST00000534176 TESK2Q96S53 571 aa21.69■■□□□ 1.06
UBXN1-217ENST00000534176 TTC21BQ7Z4L5 1316 aa21.69■■□□□ 1.06
UBXN1-217ENST00000534176 NRKQ7Z2Y5 1582 aa21.69■■□□□ 1.06
UBXN1-217ENST00000534176 NRAPQ86VF7 1730 aa21.69■■□□□ 1.06
UBXN1-217ENST00000534176 NUTM2GQ5VZR2 741 aa21.68■■□□□ 1.06
UBXN1-217ENST00000534176 GLI3P10071 1580 aa21.68■■□□□ 1.06
UBXN1-217ENST00000534176 CCDC125Q86Z20 511 aa21.67■■□□□ 1.06
UBXN1-217ENST00000534176 TMC1Q8TDI8 760 aa21.67■■□□□ 1.06
UBXN1-217ENST00000534176 SLIT3O75094 1523 aa21.66■■□□□ 1.06
UBXN1-217ENST00000534176 ZC3H6P61129 1189 aaKnown RBP21.66■■□□□ 1.06
UBXN1-217ENST00000534176 MON2Q7Z3U7 1717 aa21.66■■□□□ 1.06
UBXN1-217ENST00000534176 EDC4Q6P2E9 1401 aaKnown RBP21.64■■□□□ 1.06
UBXN1-217ENST00000534176 SPATA31A5Q5VU36 1347 aa21.64■■□□□ 1.05
UBXN1-217ENST00000534176 SPATA31A7Q8IWB4 1347 aa21.64■■□□□ 1.05
UBXN1-217ENST00000534176 PIK3C2AO00443 1686 aa21.64■■□□□ 1.05
UBXN1-217ENST00000534176 EVA1CP58658 441 aa21.63■■□□□ 1.05
UBXN1-217ENST00000534176 AATKQ6ZMQ8 1374 aa21.62■■□□□ 1.05
UBXN1-217ENST00000534176 SEPT12Q8IYM1 358 aa21.62■■□□□ 1.05
UBXN1-217ENST00000534176 USP31Q70CQ4 1352 aa21.61■■□□□ 1.05
UBXN1-217ENST00000534176 CD163L1Q9NR16 1453 aa21.6■■□□□ 1.05
UBXN1-217ENST00000534176 CHRNA2Q15822 529 aa21.6■■□□□ 1.05
UBXN1-217ENST00000534176 SLC12A5Q9H2X9 1139 aa21.6■■□□□ 1.05
UBXN1-217ENST00000534176 THRAP3Q9Y2W1 955 aaKnown RBP21.6■■□□□ 1.05
UBXN1-217ENST00000534176 ABCC6O95255 1503 aa21.6■■□□□ 1.05
UBXN1-217ENST00000534176 LMO7Q8WWI1 1683 aa21.6■■□□□ 1.05
UBXN1-217ENST00000534176 USP54Q70EL1 1684 aa21.59■■□□□ 1.05
UBXN1-217ENST00000534176 SPATA31A1Q5TZJ5 1347 aa21.58■■□□□ 1.05
UBXN1-217ENST00000534176 A0A1W2PP64 1363 aa21.58■■□□□ 1.04
UBXN1-217ENST00000534176 A0A0G2JS52 829 aa21.57■■□□□ 1.04
UBXN1-217ENST00000534176 MYT1Q01538 1121 aa21.57■■□□□ 1.04
UBXN1-217ENST00000534176 BARGINQ6ZT62 677 aa21.57■■□□□ 1.04
UBXN1-217ENST00000534176 KRT27Q7Z3Y8 459 aa21.57■■□□□ 1.04
UBXN1-217ENST00000534176 STRN4Q9NRL3 753 aa21.57■■□□□ 1.04
UBXN1-217ENST00000534176 ANKRD36BQ8N2N9 1353 aa21.57■■□□□ 1.04
UBXN1-217ENST00000534176 FAM98CQ17RN3 349 aaKnown RBP21.56■■□□□ 1.04
UBXN1-217ENST00000534176 CAMTA1Q9Y6Y1 1673 aa21.56■■□□□ 1.04
UBXN1-217ENST00000534176 ARHGEF25Q86VW2 580 aa21.55■■□□□ 1.04
UBXN1-217ENST00000534176 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.55■■□□□ 1.04
UBXN1-217ENST00000534176 COL5A2P05997 1499 aaPredicted RBP21.55■■□□□ 1.04
UBXN1-217ENST00000534176 C11orf95C9JLR9 678 aaPredicted RBP21.53■■□□□ 1.04
UBXN1-217ENST00000534176 EIF4G2P78344 907 aaKnown RBP eCLIP21.53■■□□□ 1.04
UBXN1-217ENST00000534176 TCP11L2Q8N4U5 519 aa21.53■■□□□ 1.04
UBXN1-217ENST00000534176 BLMP54132 1417 aaPredicted RBP21.53■■□□□ 1.04
UBXN1-217ENST00000534176 CRB1P82279 1406 aa21.53■■□□□ 1.04
UBXN1-217ENST00000534176 SF3B2Q13435 895 aaKnown RBP21.52■■□□□ 1.04
UBXN1-217ENST00000534176 THSD7AQ9UPZ6 1657 aa21.52■■□□□ 1.04
UBXN1-217ENST00000534176 BRWD3Q6RI45 1802 aa21.5■■□□□ 1.03
UBXN1-217ENST00000534176 NFAT5O94916 1531 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms