RNA–Protein interactions for RNA: ENST00000533657.5

CAPRIN1-215, Transcript of cell cycle associated protein 1, human

TSL 2

Gene CAPRIN1, Length 2,774 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPRIN1-215	ENST00000533657	TTC21A	Q8NDW8	1320 aa		14.06	□□□□□ -0.16
CAPRIN1-215	ENST00000533657	ACE	P12821	1306 aa		14.05	□□□□□ -0.16
CAPRIN1-215	ENST00000533657	RBM33	Q96EV2	1170 aa	Known RBP	14.05	□□□□□ -0.16
CAPRIN1-215	ENST00000533657	CARD14	Q9BXL6	1004 aa		14.05	□□□□□ -0.16
CAPRIN1-215	ENST00000533657	CGNL1	Q0VF96	1302 aa		14.05	□□□□□ -0.16
CAPRIN1-215	ENST00000533657	SBNO1	A3KN83	1393 aa		14.04	□□□□□ -0.16
CAPRIN1-215	ENST00000533657	USP31	Q70CQ4	1352 aa		14.04	□□□□□ -0.16
CAPRIN1-215	ENST00000533657	PARD3	Q8TEW0	1356 aa		14.04	□□□□□ -0.16
CAPRIN1-215	ENST00000533657	TMC1	Q8TDI8	760 aa		14.04	□□□□□ -0.16
CAPRIN1-215	ENST00000533657	AMER1	Q5JTC6	1135 aa	Predicted RBP	14.04	□□□□□ -0.16
CAPRIN1-215	ENST00000533657	POLR3GL	Q9BT43	218 aa		14.03	□□□□□ -0.16
CAPRIN1-215	ENST00000533657	SLAIN2	Q9P270	581 aa		14.03	□□□□□ -0.16
CAPRIN1-215	ENST00000533657	COL22A1	Q8NFW1	1626 aa	Predicted RBP	14.03	□□□□□ -0.16
CAPRIN1-215	ENST00000533657	PHRF1	Q9P1Y6	1649 aa	Known RBP	14.02	□□□□□ -0.16
CAPRIN1-215	ENST00000533657	OVOS2	A0A0J9YW53	1432 aa		14.02	□□□□□ -0.16
CAPRIN1-215	ENST00000533657	OVOS2	Q6IE36	1432 aa		14.02	□□□□□ -0.16
CAPRIN1-215	ENST00000533657	KNSTRN	Q9Y448	316 aa		14.02	□□□□□ -0.17
CAPRIN1-215	ENST00000533657	SLIT3	O75094	1523 aa		14.02	□□□□□ -0.17
CAPRIN1-215	ENST00000533657	CERK	Q8TCT0	537 aa		14.01	□□□□□ -0.17
CAPRIN1-215	ENST00000533657	NPHP3	Q7Z494	1330 aa		14.01	□□□□□ -0.17
CAPRIN1-215	ENST00000533657	COL16A1	Q07092	1604 aa	Predicted RBP	14.01	□□□□□ -0.17
CAPRIN1-215	ENST00000533657	ABCA3	Q99758	1704 aa		14.01	□□□□□ -0.17
CAPRIN1-215	ENST00000533657	BRINP3	Q76B58	766 aa		14	□□□□□ -0.17
CAPRIN1-215	ENST00000533657	TTC21B	Q7Z4L5	1316 aa		14	□□□□□ -0.17
CAPRIN1-215	ENST00000533657	ESCO1	Q5FWF5	840 aa		14	□□□□□ -0.17
CAPRIN1-215	ENST00000533657	RALBP1	Q15311	655 aa		14	□□□□□ -0.17
CAPRIN1-215	ENST00000533657	PHLPP1	O60346	1717 aa		13.99	□□□□□ -0.17
CAPRIN1-215	ENST00000533657	ORAI2	Q96SN7	254 aa		13.99	□□□□□ -0.17
CAPRIN1-215	ENST00000533657	SMG6	Q86US8	1419 aa	Known RBP	13.99	□□□□□ -0.17
CAPRIN1-215	ENST00000533657	NGDN	Q8NEJ9	315 aa	Known RBP	13.99	□□□□□ -0.17
CAPRIN1-215	ENST00000533657	TNS3	Q68CZ2	1445 aa		13.99	□□□□□ -0.17
CAPRIN1-215	ENST00000533657	SOS2	Q07890	1332 aa	Predicted RBP	13.98	□□□□□ -0.17
CAPRIN1-215	ENST00000533657	ABCC6	O95255	1503 aa		13.98	□□□□□ -0.17
CAPRIN1-215	ENST00000533657	TOM1	O60784	492 aa		13.97	□□□□□ -0.17
CAPRIN1-215	ENST00000533657	PSME1	Q06323	249 aa		13.97	□□□□□ -0.17
CAPRIN1-215	ENST00000533657	SHPRH	Q149N8	1683 aa		13.97	□□□□□ -0.17
CAPRIN1-215	ENST00000533657	NUTM2F	A1L443	756 aa		13.97	□□□□□ -0.17
CAPRIN1-215	ENST00000533657	PMFBP1	Q8TBY8	1022 aa		13.97	□□□□□ -0.17
CAPRIN1-215	ENST00000533657	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.97	□□□□□ -0.17
CAPRIN1-215	ENST00000533657	AATK	Q6ZMQ8	1374 aa		13.97	□□□□□ -0.17
CAPRIN1-215	ENST00000533657	FYB1	O15117	783 aa		13.96	□□□□□ -0.17
CAPRIN1-215	ENST00000533657	NFAT5	O94916	1531 aa		13.96	□□□□□ -0.18
CAPRIN1-215	ENST00000533657	ANP32C	O43423	234 aa		13.95	□□□□□ -0.18
CAPRIN1-215	ENST00000533657	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.95	□□□□□ -0.18
CAPRIN1-215	ENST00000533657	ARHGEF10	O15013	1369 aa		13.95	□□□□□ -0.18
CAPRIN1-215	ENST00000533657	USP19	O94966	1318 aa		13.94	□□□□□ -0.18
CAPRIN1-215	ENST00000533657	KRT28	Q7Z3Y7	464 aa		13.94	□□□□□ -0.18
CAPRIN1-215	ENST00000533657	SPATA31A3	Q5VYP0	1347 aa		13.93	□□□□□ -0.18
CAPRIN1-215	ENST00000533657	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.93	□□□□□ -0.18
CAPRIN1-215	ENST00000533657	KIF24	Q5T7B8	1368 aa		13.93	□□□□□ -0.18
CAPRIN1-215	ENST00000533657	CCER2	I3L3R5	266 aa		13.93	□□□□□ -0.18
CAPRIN1-215	ENST00000533657	LTN1	O94822	1766 aa		13.92	□□□□□ -0.18
CAPRIN1-215	ENST00000533657	MAP2	P11137	1827 aa	Known RBP	13.92	□□□□□ -0.18
CAPRIN1-215	ENST00000533657	INSR	P06213	1382 aa		13.91	□□□□□ -0.18
CAPRIN1-215	ENST00000533657	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.91	□□□□□ -0.18
CAPRIN1-215	ENST00000533657	FOXO3	O43524	673 aa		13.91	□□□□□ -0.18
CAPRIN1-215	ENST00000533657	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.9	□□□□□ -0.18
CAPRIN1-215	ENST00000533657	NME9	Q86XW9	330 aa		13.9	□□□□□ -0.18
CAPRIN1-215	ENST00000533657	PEAK1	Q9H792	1746 aa		13.9	□□□□□ -0.18
CAPRIN1-215	ENST00000533657	COG3	Q96JB2	828 aa		13.89	□□□□□ -0.19
CAPRIN1-215	ENST00000533657	COL3A1	P02461	1466 aa	Predicted RBP	13.89	□□□□□ -0.19
CAPRIN1-215	ENST00000533657	RTL1	A6NKG5	1358 aa		13.89	□□□□□ -0.19
CAPRIN1-215	ENST00000533657	MORC1	Q86VD1	984 aa		13.88	□□□□□ -0.19
CAPRIN1-215	ENST00000533657	COL18A1	P39060	1754 aa		13.88	□□□□□ -0.19
CAPRIN1-215	ENST00000533657	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.88	□□□□□ -0.19
CAPRIN1-215	ENST00000533657	FAM208A	Q9UK61	1670 aa	Known RBP	13.88	□□□□□ -0.19
CAPRIN1-215	ENST00000533657	UBAP1L	F5GYI3	381 aa		13.88	□□□□□ -0.19
CAPRIN1-215	ENST00000533657	CC2D1B	Q5T0F9	858 aa	Known RBP	13.88	□□□□□ -0.19
CAPRIN1-215	ENST00000533657	NLRP13	Q86W25	1043 aa		13.88	□□□□□ -0.19
CAPRIN1-215	ENST00000533657	PNPLA6	Q8IY17	1366 aa		13.87	□□□□□ -0.19
CAPRIN1-215	ENST00000533657	PPP2R1A	P30153	589 aa		13.87	□□□□□ -0.19
CAPRIN1-215	ENST00000533657	GGNBP2	Q9H3C7	697 aa		13.87	□□□□□ -0.19
CAPRIN1-215	ENST00000533657	CAMTA1	Q9Y6Y1	1673 aa		13.87	□□□□□ -0.19
CAPRIN1-215	ENST00000533657	LMO7	Q8WWI1	1683 aa		13.86	□□□□□ -0.19
CAPRIN1-215	ENST00000533657	RGPD1	P0DJD0	1748 aa		13.86	□□□□□ -0.19
CAPRIN1-215	ENST00000533657	KCNH5	Q8NCM2	988 aa		13.86	□□□□□ -0.19
CAPRIN1-215	ENST00000533657	CPD	O75976	1380 aa		13.86	□□□□□ -0.19
CAPRIN1-215	ENST00000533657	ABTB2	Q8N961	1025 aa		13.86	□□□□□ -0.19
CAPRIN1-215	ENST00000533657	LRRC59	Q96AG4	307 aa	Known RBP	13.85	□□□□□ -0.19
CAPRIN1-215	ENST00000533657	MIER1	Q8N108	512 aa		13.84	□□□□□ -0.19
CAPRIN1-215	ENST00000533657	UBE2Q2	Q8WVN8	375 aa		13.84	□□□□□ -0.19
CAPRIN1-215	ENST00000533657	COL14A1	Q05707	1796 aa	Known RBP	13.84	□□□□□ -0.19
CAPRIN1-215	ENST00000533657	NLRP6	P59044	892 aa		13.83	□□□□□ -0.19
CAPRIN1-215	ENST00000533657	ZRANB1	Q9UGI0	708 aa		13.83	□□□□□ -0.2
CAPRIN1-215	ENST00000533657	BLM	P54132	1417 aa	Predicted RBP	13.82	□□□□□ -0.2
CAPRIN1-215	ENST00000533657	PAK3	O75914	559 aa	Predicted RBP	13.82	□□□□□ -0.2
CAPRIN1-215	ENST00000533657	DDX17	Q92841	729 aa	Known RBP	13.82	□□□□□ -0.2
CAPRIN1-215	ENST00000533657	NWD2	Q9ULI1	1742 aa		13.81	□□□□□ -0.2
CAPRIN1-215	ENST00000533657	FLT4	P35916	1363 aa		13.81	□□□□□ -0.2
CAPRIN1-215	ENST00000533657	XPC	Q01831	940 aa	Predicted RBP	13.81	□□□□□ -0.2
CAPRIN1-215	ENST00000533657	JCAD	Q9P266	1359 aa		13.8	□□□□□ -0.2
CAPRIN1-215	ENST00000533657	POLK	Q9UBT6	870 aa		13.8	□□□□□ -0.2
CAPRIN1-215	ENST00000533657	PLCH1	Q4KWH8	1693 aa		13.8	□□□□□ -0.2
CAPRIN1-215	ENST00000533657	NRAP	Q86VF7	1730 aa		13.79	□□□□□ -0.2
CAPRIN1-215	ENST00000533657	NCAPD2	Q15021	1401 aa		13.79	□□□□□ -0.2
CAPRIN1-215	ENST00000533657	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.78	□□□□□ -0.2
CAPRIN1-215	ENST00000533657	GC	P02774	474 aa		13.78	□□□□□ -0.2
CAPRIN1-215	ENST00000533657	RGPD5	Q99666	1765 aa		13.78	□□□□□ -0.2
CAPRIN1-215	ENST00000533657	ARHGEF25	Q86VW2	580 aa		13.78	□□□□□ -0.2
CAPRIN1-215	ENST00000533657	PLEKHG2	Q9H7P9	1386 aa		13.78	□□□□□ -0.2

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