RNA–Protein interactions for RNA: ENST00000532909.5

CHID1-220, Transcript of chitinase domain containing 1, humanhuman

TSL 5

Gene CHID1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-220ENST00000532909 USP32Q8NFA0 1604 aa27.53■■■□□ 2
CHID1-220ENST00000532909 ARHGEF10O15013 1369 aa27.53■■■□□ 2
CHID1-220ENST00000532909 CCDC7Q96M83 1385 aa27.52■■■□□ 2
CHID1-220ENST00000532909 WASLO00401 505 aaPredicted RBP27.51■■□□□ 1.99
CHID1-220ENST00000532909 SLIT2O94813 1529 aa27.51■■□□□ 1.99
CHID1-220ENST00000532909 PRR36Q9H6K5 1346 aa27.5■■□□□ 1.99
CHID1-220ENST00000532909 TULP4Q9NRJ4 1543 aa27.48■■□□□ 1.99
CHID1-220ENST00000532909 QRICH2Q9H0J4 1663 aa27.48■■□□□ 1.99
CHID1-220ENST00000532909 EVC2Q86UK5 1308 aa27.47■■□□□ 1.99
CHID1-220ENST00000532909 NGDNQ8NEJ9 315 aaKnown RBP27.47■■□□□ 1.99
CHID1-220ENST00000532909 CCDC9Q9Y3X0 531 aaKnown RBP27.47■■□□□ 1.99
CHID1-220ENST00000532909 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.47■■□□□ 1.99
CHID1-220ENST00000532909 KIF7Q2M1P5 1343 aa27.46■■□□□ 1.99
CHID1-220ENST00000532909 WASHC2AQ641Q2 1341 aa27.46■■□□□ 1.99
CHID1-220ENST00000532909 PAK3O75914 559 aaPredicted RBP27.43■■□□□ 1.98
CHID1-220ENST00000532909 GLI3P10071 1580 aa27.43■■□□□ 1.98
CHID1-220ENST00000532909 ABCA3Q99758 1704 aa27.41■■□□□ 1.98
CHID1-220ENST00000532909 FAM83GA6ND36 823 aa27.41■■□□□ 1.98
CHID1-220ENST00000532909 DIEXFQ68CQ4 756 aaKnown RBP27.41■■□□□ 1.98
CHID1-220ENST00000532909 VPS72Q15906 364 aa27.4■■□□□ 1.98
CHID1-220ENST00000532909 NUDT16Q96DE0 195 aaKnown RBP27.4■■□□□ 1.98
CHID1-220ENST00000532909 PLCH1Q4KWH8 1693 aa27.4■■□□□ 1.98
CHID1-220ENST00000532909 TRPM3Q9HCF6 1732 aaPredicted RBP27.39■■□□□ 1.98
CHID1-220ENST00000532909 NINLQ9Y2I6 1382 aa27.39■■□□□ 1.98
CHID1-220ENST00000532909 CDK19Q9BWU1 502 aa27.37■■□□□ 1.97
CHID1-220ENST00000532909 EP400Q96L91 3159 aa27.36■■□□□ 1.97
CHID1-220ENST00000532909 SEPT12Q8IYM1 358 aa27.36■■□□□ 1.97
CHID1-220ENST00000532909 ATP7BP35670 1465 aa27.36■■□□□ 1.97
CHID1-220ENST00000532909 NWD2Q9ULI1 1742 aa27.36■■□□□ 1.97
CHID1-220ENST00000532909 A0A0G2JS52 829 aa27.35■■□□□ 1.97
CHID1-220ENST00000532909 C11orf95C9JLR9 678 aaPredicted RBP27.35■■□□□ 1.97
CHID1-220ENST00000532909 MYT1Q01538 1121 aa27.35■■□□□ 1.97
CHID1-220ENST00000532909 CCDC125Q86Z20 511 aa27.35■■□□□ 1.97
CHID1-220ENST00000532909 ALS2Q96Q42 1657 aa27.34■■□□□ 1.97
CHID1-220ENST00000532909 BTG4Q9NY30 223 aa27.34■■□□□ 1.97
CHID1-220ENST00000532909 DDX10Q13206 875 aaKnown RBP27.33■■□□□ 1.97
CHID1-220ENST00000532909 ITSN1Q15811 1721 aa27.33■■□□□ 1.96
CHID1-220ENST00000532909 POLR3GLQ9BT43 218 aa27.29■■□□□ 1.96
CHID1-220ENST00000532909 PRDM11Q9NQV5 511 aa27.29■■□□□ 1.96
CHID1-220ENST00000532909 BRWD3Q6RI45 1802 aa27.28■■□□□ 1.96
CHID1-220ENST00000532909 NUTM2GQ5VZR2 741 aa27.28■■□□□ 1.96
CHID1-220ENST00000532909 ZRANB1Q9UGI0 708 aa27.28■■□□□ 1.96
CHID1-220ENST00000532909 CCDC61Q9Y6R9 512 aa27.28■■□□□ 1.96
CHID1-220ENST00000532909 ACEP12821 1306 aa27.27■■□□□ 1.96
CHID1-220ENST00000532909 SRPK2P78362 688 aaKnown RBP27.27■■□□□ 1.96
CHID1-220ENST00000532909 FAM98CQ17RN3 349 aaKnown RBP27.27■■□□□ 1.96
CHID1-220ENST00000532909 COL14A1Q05707 1796 aaKnown RBP27.27■■□□□ 1.96
CHID1-220ENST00000532909 BLMP54132 1417 aaPredicted RBP27.26■■□□□ 1.95
CHID1-220ENST00000532909 ONECUT3O60422 494 aaPredicted RBP27.26■■□□□ 1.95
CHID1-220ENST00000532909 KRT27Q7Z3Y8 459 aa27.26■■□□□ 1.95
CHID1-220ENST00000532909 SF3B2Q13435 895 aaKnown RBP27.25■■□□□ 1.95
CHID1-220ENST00000532909 NRAPQ86VF7 1730 aa27.24■■□□□ 1.95
CHID1-220ENST00000532909 POLR3AO14802 1390 aaPredicted RBP27.22■■□□□ 1.95
CHID1-220ENST00000532909 ZC3H6P61129 1189 aaKnown RBP27.22■■□□□ 1.95
CHID1-220ENST00000532909 CHRNA2Q15822 529 aa27.22■■□□□ 1.95
CHID1-220ENST00000532909 KIAA0232Q92628 1395 aa27.22■■□□□ 1.95
CHID1-220ENST00000532909 TOPAZ1Q8N9V7 1692 aa27.21■■□□□ 1.95
CHID1-220ENST00000532909 PLEKHG3A1L390 1219 aa27.21■■□□□ 1.95
CHID1-220ENST00000532909 CRYBG1Q9Y4K1 1723 aa27.21■■□□□ 1.95
CHID1-220ENST00000532909 DEFB132Q7Z7B7 95 aa27.2■■□□□ 1.94
CHID1-220ENST00000532909 CABP2Q9NPB3 220 aa27.2■■□□□ 1.94
CHID1-220ENST00000532909 ABTB2Q8N961 1025 aa27.19■■□□□ 1.94
CHID1-220ENST00000532909 SPATA31A5Q5VU36 1347 aa27.18■■□□□ 1.94
CHID1-220ENST00000532909 SPATA31A7Q8IWB4 1347 aa27.18■■□□□ 1.94
CHID1-220ENST00000532909 STRN4Q9NRL3 753 aa27.18■■□□□ 1.94
CHID1-220ENST00000532909 KTN1Q86UP2 1357 aaKnown RBP27.18■■□□□ 1.94
CHID1-220ENST00000532909 PPIP5K1Q6PFW1 1433 aa27.17■■□□□ 1.94
CHID1-220ENST00000532909 ANP32CO43423 234 aa27.17■■□□□ 1.94
CHID1-220ENST00000532909 TERF2IPQ9NYB0 399 aa27.17■■□□□ 1.94
CHID1-220ENST00000532909 PHRF1Q9P1Y6 1649 aaKnown RBP27.16■■□□□ 1.94
CHID1-220ENST00000532909 MYOM1P52179 1685 aa27.14■■□□□ 1.94
CHID1-220ENST00000532909 ANKRD36BQ8N2N9 1353 aa27.14■■□□□ 1.94
CHID1-220ENST00000532909 TMC1Q8TDI8 760 aa27.13■■□□□ 1.93
CHID1-220ENST00000532909 SRCAPQ6ZRS2 3230 aa27.12■■□□□ 1.93
CHID1-220ENST00000532909 FAM182BQ5T319 152 aa27.12■■□□□ 1.93
CHID1-220ENST00000532909 HDGFL2Q7Z4V5 671 aaPredicted RBP27.12■■□□□ 1.93
CHID1-220ENST00000532909 KNSTRNQ9Y448 316 aa27.12■■□□□ 1.93
CHID1-220ENST00000532909 EVA1CP58658 441 aa27.11■■□□□ 1.93
CHID1-220ENST00000532909 PANK3Q9H999 370 aa27.11■■□□□ 1.93
CHID1-220ENST00000532909 NPC1L1Q9UHC9 1359 aa27.1■■□□□ 1.93
CHID1-220ENST00000532909 NLRP13Q86W25 1043 aa27.1■■□□□ 1.93
CHID1-220ENST00000532909 CABP1Q9NZU7 370 aa27.1■■□□□ 1.93
CHID1-220ENST00000532909 USP35Q9P2H5 1018 aa27.1■■□□□ 1.93
CHID1-220ENST00000532909 SPATA31A1Q5TZJ5 1347 aa27.1■■□□□ 1.93
CHID1-220ENST00000532909 BAG6P46379 1132 aa27.08■■□□□ 1.93
CHID1-220ENST00000532909 ZNF692Q9BU19 519 aaPredicted RBP27.08■■□□□ 1.93
CHID1-220ENST00000532909 USP19O94966 1318 aa27.07■■□□□ 1.92
CHID1-220ENST00000532909 NRKQ7Z2Y5 1582 aa27.06■■□□□ 1.92
CHID1-220ENST00000532909 ZBTB7CA1YPR0 619 aa27.06■■□□□ 1.92
CHID1-220ENST00000532909 PER1O15534 1290 aaPredicted RBP27.05■■□□□ 1.92
CHID1-220ENST00000532909 SLC12A5Q9H2X9 1139 aa27.05■■□□□ 1.92
CHID1-220ENST00000532909 THSD7AQ9UPZ6 1657 aa27.05■■□□□ 1.92
CHID1-220ENST00000532909 GCP02774 474 aa27.04■■□□□ 1.92
CHID1-220ENST00000532909 NSD2O96028 1365 aa27.04■■□□□ 1.92
CHID1-220ENST00000532909 SSH2Q76I76 1423 aa27.04■■□□□ 1.92
CHID1-220ENST00000532909 CPDO75976 1380 aa27.03■■□□□ 1.92
CHID1-220ENST00000532909 USP6P35125 1406 aa27.03■■□□□ 1.92
CHID1-220ENST00000532909 NLRP6P59044 892 aa27.03■■□□□ 1.92
CHID1-220ENST00000532909 RALBP1Q15311 655 aa27.03■■□□□ 1.92
CHID1-220ENST00000532909 BRD4O60885 1362 aaPredicted RBP27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms