RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 KIF1AQ12756 1690 aa29.75■■■□□ 2.35
PACSIN3-209ENST00000532457 NLRP13Q86W25 1043 aa29.73■■■□□ 2.35
PACSIN3-209ENST00000532457 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.73■■■□□ 2.35
PACSIN3-209ENST00000532457 NGDNQ8NEJ9 315 aaKnown RBP29.73■■■□□ 2.35
PACSIN3-209ENST00000532457 ZNF692Q9BU19 519 aaPredicted RBP29.73■■■□□ 2.35
PACSIN3-209ENST00000532457 GGNBP2Q9H3C7 697 aa29.73■■■□□ 2.35
PACSIN3-209ENST00000532457 NPHP3Q7Z494 1330 aa29.72■■■□□ 2.35
PACSIN3-209ENST00000532457 BRD4O60885 1362 aaPredicted RBP29.72■■■□□ 2.35
PACSIN3-209ENST00000532457 AKAP12Q02952 1782 aa29.71■■■□□ 2.35
PACSIN3-209ENST00000532457 MORC1Q86VD1 984 aa29.71■■■□□ 2.35
PACSIN3-209ENST00000532457 FOXO3O43524 673 aa29.71■■■□□ 2.35
PACSIN3-209ENST00000532457 EDC4Q6P2E9 1401 aaKnown RBP29.69■■■□□ 2.34
PACSIN3-209ENST00000532457 TNNT2P45379 298 aaPredicted RBP29.68■■■□□ 2.34
PACSIN3-209ENST00000532457 POLR3AO14802 1390 aaPredicted RBP29.68■■■□□ 2.34
PACSIN3-209ENST00000532457 MON2Q7Z3U7 1717 aa29.68■■■□□ 2.34
PACSIN3-209ENST00000532457 PSME1Q06323 249 aa29.67■■■□□ 2.34
PACSIN3-209ENST00000532457 PNISRQ8TF01 805 aaKnown RBP29.67■■■□□ 2.34
PACSIN3-209ENST00000532457 NSD2O96028 1365 aa29.67■■■□□ 2.34
PACSIN3-209ENST00000532457 FAM9BQ8IZU0 186 aa29.66■■■□□ 2.34
PACSIN3-209ENST00000532457 ZRANB1Q9UGI0 708 aa29.66■■■□□ 2.34
PACSIN3-209ENST00000532457 NME9Q86XW9 330 aa29.66■■■□□ 2.34
PACSIN3-209ENST00000532457 NHSL1Q5SYE7 1610 aa29.64■■■□□ 2.34
PACSIN3-209ENST00000532457 AHDC1Q5TGY3 1603 aaPredicted RBP29.64■■■□□ 2.34
PACSIN3-209ENST00000532457 USP6P35125 1406 aa29.64■■■□□ 2.33
PACSIN3-209ENST00000532457 SSH2Q76I76 1423 aa29.63■■■□□ 2.33
PACSIN3-209ENST00000532457 TTC21BQ7Z4L5 1316 aa29.63■■■□□ 2.33
PACSIN3-209ENST00000532457 DDX17Q92841 729 aaKnown RBP29.62■■■□□ 2.33
PACSIN3-209ENST00000532457 KRT28Q7Z3Y7 464 aa29.61■■■□□ 2.33
PACSIN3-209ENST00000532457 SOS2Q07890 1332 aaPredicted RBP29.61■■■□□ 2.33
PACSIN3-209ENST00000532457 PHLPP1O60346 1717 aa29.59■■■□□ 2.33
PACSIN3-209ENST00000532457 KIF20BQ96Q89 1820 aa29.59■■■□□ 2.33
PACSIN3-209ENST00000532457 NRKQ7Z2Y5 1582 aa29.58■■■□□ 2.33
PACSIN3-209ENST00000532457 FBLN1P23142 703 aa29.57■■■□□ 2.32
PACSIN3-209ENST00000532457 XPCQ01831 940 aaPredicted RBP29.57■■■□□ 2.32
PACSIN3-209ENST00000532457 PXDNQ92626 1479 aa29.57■■■□□ 2.32
PACSIN3-209ENST00000532457 LRRC59Q96AG4 307 aaKnown RBP29.57■■■□□ 2.32
PACSIN3-209ENST00000532457 ANKRD26Q9UPS8 1709 aa29.56■■■□□ 2.32
PACSIN3-209ENST00000532457 HSPA1LP34931 641 aa29.55■■■□□ 2.32
PACSIN3-209ENST00000532457 MTHFSP49914 203 aa29.54■■■□□ 2.32
PACSIN3-209ENST00000532457 SBNO1A3KN83 1393 aa29.53■■■□□ 2.32
PACSIN3-209ENST00000532457 PAK3O75914 559 aaPredicted RBP29.53■■■□□ 2.32
PACSIN3-209ENST00000532457 COL16A1Q07092 1604 aaPredicted RBP29.52■■■□□ 2.32
PACSIN3-209ENST00000532457 TTC21AQ8NDW8 1320 aa29.49■■■□□ 2.31
PACSIN3-209ENST00000532457 COG3Q96JB2 828 aa29.49■■■□□ 2.31
PACSIN3-209ENST00000532457 SPATA31A3Q5VYP0 1347 aa29.49■■■□□ 2.31
PACSIN3-209ENST00000532457 TNS3Q68CZ2 1445 aa29.47■■■□□ 2.31
PACSIN3-209ENST00000532457 TRPM3Q9HCF6 1732 aaPredicted RBP29.47■■■□□ 2.31
PACSIN3-209ENST00000532457 LMOD2Q6P5Q4 547 aa29.46■■■□□ 2.31
PACSIN3-209ENST00000532457 ARHGEF10O15013 1369 aa29.46■■■□□ 2.31
PACSIN3-209ENST00000532457 POLKQ9UBT6 870 aa29.45■■■□□ 2.3
PACSIN3-209ENST00000532457 OVOS2A0A0J9YW53 1432 aa29.44■■■□□ 2.3
PACSIN3-209ENST00000532457 OVOS2Q6IE36 1432 aa29.44■■■□□ 2.3
PACSIN3-209ENST00000532457 ABTB2Q8N961 1025 aa29.44■■■□□ 2.3
PACSIN3-209ENST00000532457 ADAMTS8Q9UP79 889 aa29.44■■■□□ 2.3
PACSIN3-209ENST00000532457 HNRNPUQ00839 825 aaKnown RBP eCLIP29.43■■■□□ 2.3
PACSIN3-209ENST00000532457 JCADQ9P266 1359 aa29.43■■■□□ 2.3
PACSIN3-209ENST00000532457 NUTM2GQ5VZR2 741 aa29.43■■■□□ 2.3
PACSIN3-209ENST00000532457 PIK3C2AO00443 1686 aa29.42■■■□□ 2.3
PACSIN3-209ENST00000532457 USP31Q70CQ4 1352 aa29.41■■■□□ 2.3
PACSIN3-209ENST00000532457 SENP3-EIF4A1A0A087X0R7 540 aa29.4■■■□□ 2.3
PACSIN3-209ENST00000532457 ALS2Q96Q42 1657 aa29.4■■■□□ 2.3
PACSIN3-209ENST00000532457 NLRP6P59044 892 aa29.39■■■□□ 2.3
PACSIN3-209ENST00000532457 MAP2P11137 1827 aaKnown RBP29.39■■■□□ 2.3
PACSIN3-209ENST00000532457 AATKQ6ZMQ8 1374 aa29.39■■■□□ 2.29
PACSIN3-209ENST00000532457 ILDR1Q86SU0 546 aaPredicted RBP29.38■■■□□ 2.29
PACSIN3-209ENST00000532457 EMILIN1Q9Y6C2 1016 aa29.38■■■□□ 2.29
PACSIN3-209ENST00000532457 RRS1Q15050 365 aaKnown RBP29.38■■■□□ 2.29
PACSIN3-209ENST00000532457 PNPLA6Q8IY17 1366 aa29.37■■■□□ 2.29
PACSIN3-209ENST00000532457 SHPRHQ149N8 1683 aa29.36■■■□□ 2.29
PACSIN3-209ENST00000532457 WDR43Q15061 677 aaKnown RBP eCLIP29.35■■■□□ 2.29
PACSIN3-209ENST00000532457 PPM1GO15355 546 aaPredicted RBP29.34■■■□□ 2.29
PACSIN3-209ENST00000532457 CFAP53Q96M91 514 aa29.34■■■□□ 2.29
PACSIN3-209ENST00000532457 MARF1Q9Y4F3 1742 aaKnown RBP29.34■■■□□ 2.29
PACSIN3-209ENST00000532457 SOX12O15370 315 aa29.34■■■□□ 2.29
PACSIN3-209ENST00000532457 CENPBP07199 599 aaPredicted RBP29.34■■■□□ 2.29
PACSIN3-209ENST00000532457 COL3A1P02461 1466 aaPredicted RBP29.33■■■□□ 2.29
PACSIN3-209ENST00000532457 SPATA31A6Q5VVP1 1343 aa29.32■■■□□ 2.28
PACSIN3-209ENST00000532457 COL22A1Q8NFW1 1626 aaPredicted RBP29.32■■■□□ 2.28
PACSIN3-209ENST00000532457 INSRP06213 1382 aa29.3■■■□□ 2.28
PACSIN3-209ENST00000532457 HAP1P54257 671 aaPredicted RBP29.29■■■□□ 2.28
PACSIN3-209ENST00000532457 SMG6Q86US8 1419 aaKnown RBP29.29■■■□□ 2.28
PACSIN3-209ENST00000532457 BLMP54132 1417 aaPredicted RBP29.28■■■□□ 2.28
PACSIN3-209ENST00000532457 MED1Q15648 1581 aaPredicted RBP29.28■■■□□ 2.28
PACSIN3-209ENST00000532457 USP54Q70EL1 1684 aa29.27■■■□□ 2.28
PACSIN3-209ENST00000532457 PLEKHG5O94827 1062 aa29.27■■■□□ 2.28
PACSIN3-209ENST00000532457 USP19O94966 1318 aa29.26■■■□□ 2.27
PACSIN3-209ENST00000532457 CABLES1Q8TDN4 633 aa29.25■■■□□ 2.27
PACSIN3-209ENST00000532457 DIAPH1O60610 1272 aaKnown RBP29.24■■■□□ 2.27
PACSIN3-209ENST00000532457 CCDC146Q8IYE0 955 aa29.24■■■□□ 2.27
PACSIN3-209ENST00000532457 KCNH5Q8NCM2 988 aa29.24■■■□□ 2.27
PACSIN3-209ENST00000532457 MAP3K19Q56UN5 1328 aa29.24■■■□□ 2.27
PACSIN3-209ENST00000532457 NUTM2BA6NNL0 878 aaPredicted RBP29.23■■■□□ 2.27
PACSIN3-209ENST00000532457 NUTM2EB1AL46 878 aaPredicted RBP29.23■■■□□ 2.27
PACSIN3-209ENST00000532457 NUTM2AQ8IVF1 878 aaPredicted RBP29.23■■■□□ 2.27
PACSIN3-209ENST00000532457 GCP02774 474 aa29.22■■■□□ 2.27
PACSIN3-209ENST00000532457 PEAK1Q9H792 1746 aa29.22■■■□□ 2.27
PACSIN3-209ENST00000532457 ZBED9Q6R2W3 1325 aa29.22■■■□□ 2.27
PACSIN3-209ENST00000532457 CDK12Q9NYV4 1490 aaPredicted RBP29.22■■■□□ 2.27
PACSIN3-209ENST00000532457 IL13P35225 146 aa29.21■■■□□ 2.27
PACSIN3-209ENST00000532457 U2AF1L5P0DN76 240 aaPredicted RBP29.2■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms