RNA–Protein interactions for RNA: ENST00000532443.1

PPFIA1-221, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 4

Gene PPFIA1, Length 587 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-221ENST00000532443 PTPRNQ16849 979 aa8.86□□□□□ -0.99
PPFIA1-221ENST00000532443 TUSC1Q2TAM9 212 aa8.86□□□□□ -0.99
PPFIA1-221ENST00000532443 TRIM67Q6ZTA4 783 aa8.86□□□□□ -0.99
PPFIA1-221ENST00000532443 LINC01559Q495D7 138 aa8.84□□□□□ -0.99
PPFIA1-221ENST00000532443 DESI1Q6ICB0 168 aa8.84□□□□□ -0.99
PPFIA1-221ENST00000532443 LYPD8Q6UX82 237 aa8.84□□□□□ -0.99
PPFIA1-221ENST00000532443 PCMTD1Q96MG8 357 aaPredicted RBP8.84□□□□□ -0.99
PPFIA1-221ENST00000532443 MAP10Q9P2G4 905 aa8.84□□□□□ -0.99
PPFIA1-221ENST00000532443 Q6ZNB5 142 aa8.83□□□□□ -1
PPFIA1-221ENST00000532443 HELBQ8NG08 1087 aaPredicted RBP8.83□□□□□ -1
PPFIA1-221ENST00000532443 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.83□□□□□ -1
PPFIA1-221ENST00000532443 UNC93B1Q9H1C4 597 aa8.83□□□□□ -1
PPFIA1-221ENST00000532443 GDF9O60383 454 aa8.82□□□□□ -1
PPFIA1-221ENST00000532443 KCNH2Q12809 1159 aa8.82□□□□□ -1
PPFIA1-221ENST00000532443 EVA1BQ9NVM1 165 aa8.82□□□□□ -1
PPFIA1-221ENST00000532443 PKD2L1Q9P0L9 805 aa8.82□□□□□ -1
PPFIA1-221ENST00000532443 CFTRP13569 1480 aa8.82□□□□□ -1
PPFIA1-221ENST00000532443 AP1G2O75843 785 aa8.81□□□□□ -1
PPFIA1-221ENST00000532443 SKOR1P84550 965 aa8.81□□□□□ -1
PPFIA1-221ENST00000532443 CTDSPL2Q05D32 466 aa8.81□□□□□ -1
PPFIA1-221ENST00000532443 CADPSQ9ULU8 1353 aa8.81□□□□□ -1
PPFIA1-221ENST00000532443 NRG2O14511 850 aaPredicted RBP8.8□□□□□ -1
PPFIA1-221ENST00000532443 BAP1Q92560 729 aa8.8□□□□□ -1
PPFIA1-221ENST00000532443 WRNQ14191 1432 aaPredicted RBP eCLIP8.8□□□□□ -1
PPFIA1-221ENST00000532443 LRRN4Q8WUT4 740 aa8.79□□□□□ -1
PPFIA1-221ENST00000532443 F12P00748 615 aaPredicted RBP8.78□□□□□ -1
PPFIA1-221ENST00000532443 LAPTM4AQ15012 233 aa8.78□□□□□ -1
PPFIA1-221ENST00000532443 MRGPRX2Q96LB1 330 aa8.78□□□□□ -1
PPFIA1-221ENST00000532443 ABCC8Q09428 1581 aa8.78□□□□□ -1
PPFIA1-221ENST00000532443 FAM187AA6NFU0 413 aa8.77□□□□□ -1.01
PPFIA1-221ENST00000532443 RFC5P40937 340 aa8.77□□□□□ -1.01
PPFIA1-221ENST00000532443 SH3BP2P78314 561 aa8.77□□□□□ -1.01
PPFIA1-221ENST00000532443 RC3H1Q5TC82 1133 aaKnown RBP8.77□□□□□ -1.01
PPFIA1-221ENST00000532443 PPP2R2DQ66LE6 453 aa8.77□□□□□ -1.01
PPFIA1-221ENST00000532443 CYP4X1Q8N118 509 aa8.77□□□□□ -1.01
PPFIA1-221ENST00000532443 WNT7AO00755 349 aa8.76□□□□□ -1.01
PPFIA1-221ENST00000532443 PRR20EP86478 221 aa8.76□□□□□ -1.01
PPFIA1-221ENST00000532443 PRR20CP86479 221 aa8.76□□□□□ -1.01
PPFIA1-221ENST00000532443 PRR20DP86480 221 aa8.76□□□□□ -1.01
PPFIA1-221ENST00000532443 PRR20BP86481 221 aa8.76□□□□□ -1.01
PPFIA1-221ENST00000532443 PRR20AP86496 221 aa8.76□□□□□ -1.01
PPFIA1-221ENST00000532443 GOPCQ9HD26 462 aa8.76□□□□□ -1.01
PPFIA1-221ENST00000532443 TTC24A2A3L6 582 aaPredicted RBP8.75□□□□□ -1.01
PPFIA1-221ENST00000532443 WNT7BP56706 349 aa8.75□□□□□ -1.01
PPFIA1-221ENST00000532443 ZNF511Q8NB15 262 aa8.75□□□□□ -1.01
PPFIA1-221ENST00000532443 EHBP1Q8NDI1 1231 aa8.75□□□□□ -1.01
PPFIA1-221ENST00000532443 PRDM2Q13029 1718 aa8.74□□□□□ -1.01
PPFIA1-221ENST00000532443 PKDCCQ504Y2 493 aa8.74□□□□□ -1.01
PPFIA1-221ENST00000532443 EEA1Q15075 1411 aa8.73□□□□□ -1.01
PPFIA1-221ENST00000532443 USP17L8P0C7I0 530 aa8.73□□□□□ -1.01
PPFIA1-221ENST00000532443 AGERQ15109 404 aa8.73□□□□□ -1.01
PPFIA1-221ENST00000532443 NR6A1Q15406 480 aa8.73□□□□□ -1.01
PPFIA1-221ENST00000532443 FOXJ1Q92949 421 aa8.73□□□□□ -1.01
PPFIA1-221ENST00000532443 LCE2BO14633 110 aa8.72□□□□□ -1.01
PPFIA1-221ENST00000532443 HMX1Q9NP08 348 aaPredicted RBP8.72□□□□□ -1.01
PPFIA1-221ENST00000532443 TOR4AQ9NXH8 423 aa8.72□□□□□ -1.01
PPFIA1-221ENST00000532443 LAMC3Q9Y6N6 1575 aa8.72□□□□□ -1.01
PPFIA1-221ENST00000532443 J3QL48 77 aa8.71□□□□□ -1.02
PPFIA1-221ENST00000532443 EPS8L1Q8TE68 723 aa8.71□□□□□ -1.02
PPFIA1-221ENST00000532443 TLL2Q9Y6L7 1015 aa8.71□□□□□ -1.02
PPFIA1-221ENST00000532443 TOP2BQ02880 1626 aa8.7□□□□□ -1.02
PPFIA1-221ENST00000532443 ALDH1A1P00352 501 aa8.7□□□□□ -1.02
PPFIA1-221ENST00000532443 SNIP1Q8TAD8 396 aaKnown RBP8.7□□□□□ -1.02
PPFIA1-221ENST00000532443 SYNJ1O43426 1573 aa8.69□□□□□ -1.02
PPFIA1-221ENST00000532443 TRAF7Q6Q0C0 670 aa8.69□□□□□ -1.02
PPFIA1-221ENST00000532443 FAM9AQ8IZU1 332 aaPredicted RBP8.69□□□□□ -1.02
PPFIA1-221ENST00000532443 PDS5BQ9NTI5 1447 aa8.69□□□□□ -1.02
PPFIA1-221ENST00000532443 FANCD2Q9BXW9 1451 aa8.69□□□□□ -1.02
PPFIA1-221ENST00000532443 BIVM-ERCC5R4GMW8 1640 aa8.69□□□□□ -1.02
PPFIA1-221ENST00000532443 DGAT1O75907 488 aa8.68□□□□□ -1.02
PPFIA1-221ENST00000532443 CARD14Q9BXL6 1004 aa8.68□□□□□ -1.02
PPFIA1-221ENST00000532443 MAGEB6P1A0A0J9YX57 407 aa8.67□□□□□ -1.02
PPFIA1-221ENST00000532443 ST8SIA5O15466 376 aa8.67□□□□□ -1.02
PPFIA1-221ENST00000532443 SMPD1P17405 629 aa8.67□□□□□ -1.02
PPFIA1-221ENST00000532443 TMEM259Q4ZIN3 620 aa8.67□□□□□ -1.02
PPFIA1-221ENST00000532443 C4orf48Q5BLP8 95 aa8.67□□□□□ -1.02
PPFIA1-221ENST00000532443 NBPF14Q5TI25 921 aa8.67□□□□□ -1.02
PPFIA1-221ENST00000532443 ARMC2Q8NEN0 867 aa8.67□□□□□ -1.02
PPFIA1-221ENST00000532443 SIAH2O43255 324 aa8.66□□□□□ -1.02
PPFIA1-221ENST00000532443 MYT1Q01538 1121 aa8.66□□□□□ -1.02
PPFIA1-221ENST00000532443 ARID5BQ14865 1188 aa8.66□□□□□ -1.02
PPFIA1-221ENST00000532443 FKBPLQ9UIM3 349 aa8.66□□□□□ -1.02
PPFIA1-221ENST00000532443 LOC105371045A0A1W2PR82 267 aa8.65□□□□□ -1.02
PPFIA1-221ENST00000532443 NESP48681 1621 aa8.65□□□□□ -1.03
PPFIA1-221ENST00000532443 CUX1P39880 1505 aa8.64□□□□□ -1.03
PPFIA1-221ENST00000532443 CEP164Q9UPV0 1460 aa8.64□□□□□ -1.03
PPFIA1-221ENST00000532443 VARSP26640 1264 aaKnown RBP8.64□□□□□ -1.03
PPFIA1-221ENST00000532443 BPHLQ86WA6 291 aaPredicted RBP8.64□□□□□ -1.03
PPFIA1-221ENST00000532443 FAM174AQ8TBP5 190 aa8.64□□□□□ -1.03
PPFIA1-221ENST00000532443 HPS1Q92902 700 aa8.64□□□□□ -1.03
PPFIA1-221ENST00000532443 WASF2Q9Y6W5 498 aa8.64□□□□□ -1.03
PPFIA1-221ENST00000532443 SOGA1O94964 1423 aa8.63□□□□□ -1.03
PPFIA1-221ENST00000532443 SH3BP5LQ7L8J4 393 aa8.63□□□□□ -1.03
PPFIA1-221ENST00000532443 TRIM34Q9BYJ4 488 aa8.63□□□□□ -1.03
PPFIA1-221ENST00000532443 SNRKQ9NRH2 765 aa8.63□□□□□ -1.03
PPFIA1-221ENST00000532443 DNMBPQ6XZF7 1577 aa8.61□□□□□ -1.03
PPFIA1-221ENST00000532443 ARHGAP9Q9BRR9 750 aa8.61□□□□□ -1.03
PPFIA1-221ENST00000532443 SH3RF1Q7Z6J0 888 aa8.6□□□□□ -1.03
PPFIA1-221ENST00000532443 MTMR14Q8NCE2 650 aa8.6□□□□□ -1.03
PPFIA1-221ENST00000532443 AAASQ9NRG9 546 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms