RNA–Protein interactions for RNA: ENST00000532268.1

SRPRA-207, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 829 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-207ENST00000532268 LMOD2Q6P5Q4 547 aa12.97□□□□□ -0.33
SRPRA-207ENST00000532268 BRINP3Q76B58 766 aa12.97□□□□□ -0.33
SRPRA-207ENST00000532268 USP6P35125 1406 aa12.96□□□□□ -0.33
SRPRA-207ENST00000532268 KIF1AQ12756 1690 aa12.96□□□□□ -0.33
SRPRA-207ENST00000532268 NPHP3Q7Z494 1330 aa12.96□□□□□ -0.33
SRPRA-207ENST00000532268 TTC21BQ7Z4L5 1316 aa12.96□□□□□ -0.33
SRPRA-207ENST00000532268 PLEKHG5O94827 1062 aa12.96□□□□□ -0.33
SRPRA-207ENST00000532268 KRT28Q7Z3Y7 464 aa12.96□□□□□ -0.33
SRPRA-207ENST00000532268 MORC1Q86VD1 984 aa12.96□□□□□ -0.33
SRPRA-207ENST00000532268 DDX17Q92841 729 aaKnown RBP12.96□□□□□ -0.33
SRPRA-207ENST00000532268 AKAP12Q02952 1782 aa12.95□□□□□ -0.34
SRPRA-207ENST00000532268 AMER1Q5JTC6 1135 aaPredicted RBP12.95□□□□□ -0.34
SRPRA-207ENST00000532268 NME9Q86XW9 330 aa12.95□□□□□ -0.34
SRPRA-207ENST00000532268 MIER1Q8N108 512 aa12.95□□□□□ -0.34
SRPRA-207ENST00000532268 GGNBP2Q9H3C7 697 aa12.95□□□□□ -0.34
SRPRA-207ENST00000532268 TTC21AQ8NDW8 1320 aa12.94□□□□□ -0.34
SRPRA-207ENST00000532268 TNNT2P45379 298 aaPredicted RBP12.94□□□□□ -0.34
SRPRA-207ENST00000532268 NUTM2GQ5VZR2 741 aa12.94□□□□□ -0.34
SRPRA-207ENST00000532268 MON2Q7Z3U7 1717 aa12.93□□□□□ -0.34
SRPRA-207ENST00000532268 RALBP1Q15311 655 aa12.93□□□□□ -0.34
SRPRA-207ENST00000532268 ABTB2Q8N961 1025 aa12.93□□□□□ -0.34
SRPRA-207ENST00000532268 COG3Q96JB2 828 aa12.93□□□□□ -0.34
SRPRA-207ENST00000532268 PRKRIP1Q9H875 184 aaPredicted RBP12.93□□□□□ -0.34
SRPRA-207ENST00000532268 NSD2O96028 1365 aa12.93□□□□□ -0.34
SRPRA-207ENST00000532268 FYB1O15117 783 aa12.92□□□□□ -0.34
SRPRA-207ENST00000532268 PHLPP1O60346 1717 aa12.92□□□□□ -0.34
SRPRA-207ENST00000532268 ZRANB1Q9UGI0 708 aa12.92□□□□□ -0.34
SRPRA-207ENST00000532268 SOX12O15370 315 aa12.91□□□□□ -0.34
SRPRA-207ENST00000532268 NLRP6P59044 892 aa12.91□□□□□ -0.34
SRPRA-207ENST00000532268 BRD4O60885 1362 aaPredicted RBP12.91□□□□□ -0.34
SRPRA-207ENST00000532268 NPC1L1Q9UHC9 1359 aa12.91□□□□□ -0.34
SRPRA-207ENST00000532268 KIF20BQ96Q89 1820 aa12.89□□□□□ -0.35
SRPRA-207ENST00000532268 PARD3Q8TEW0 1356 aa12.89□□□□□ -0.35
SRPRA-207ENST00000532268 NRKQ7Z2Y5 1582 aa12.89□□□□□ -0.35
SRPRA-207ENST00000532268 MYBBP1AQ9BQG0 1328 aaKnown RBP12.88□□□□□ -0.35
SRPRA-207ENST00000532268 SSH2Q76I76 1423 aa12.88□□□□□ -0.35
SRPRA-207ENST00000532268 AHDC1Q5TGY3 1603 aaPredicted RBP12.88□□□□□ -0.35
SRPRA-207ENST00000532268 NLRP13Q86W25 1043 aa12.88□□□□□ -0.35
SRPRA-207ENST00000532268 SBNO1A3KN83 1393 aa12.87□□□□□ -0.35
SRPRA-207ENST00000532268 ZBTB7CA1YPR0 619 aa12.87□□□□□ -0.35
SRPRA-207ENST00000532268 HAP1P54257 671 aaPredicted RBP12.87□□□□□ -0.35
SRPRA-207ENST00000532268 LRRC59Q96AG4 307 aaKnown RBP12.87□□□□□ -0.35
SRPRA-207ENST00000532268 TNS3Q68CZ2 1445 aa12.87□□□□□ -0.35
SRPRA-207ENST00000532268 PXDNQ92626 1479 aa12.86□□□□□ -0.35
SRPRA-207ENST00000532268 JCADQ9P266 1359 aa12.86□□□□□ -0.35
SRPRA-207ENST00000532268 PPM1GO15355 546 aaPredicted RBP12.86□□□□□ -0.35
SRPRA-207ENST00000532268 PPP2R1AP30153 589 aa12.86□□□□□ -0.35
SRPRA-207ENST00000532268 COL16A1Q07092 1604 aaPredicted RBP12.86□□□□□ -0.35
SRPRA-207ENST00000532268 NHSL1Q5SYE7 1610 aa12.86□□□□□ -0.35
SRPRA-207ENST00000532268 SOS2Q07890 1332 aaPredicted RBP12.86□□□□□ -0.35
SRPRA-207ENST00000532268 SPATA31A3Q5VYP0 1347 aa12.86□□□□□ -0.35
SRPRA-207ENST00000532268 ARHGEF10O15013 1369 aa12.85□□□□□ -0.35
SRPRA-207ENST00000532268 MRS2Q9HD23 443 aa12.85□□□□□ -0.35
SRPRA-207ENST00000532268 USP31Q70CQ4 1352 aa12.84□□□□□ -0.35
SRPRA-207ENST00000532268 PIK3C2AO00443 1686 aa12.84□□□□□ -0.35
SRPRA-207ENST00000532268 TRPM3Q9HCF6 1732 aaPredicted RBP12.84□□□□□ -0.35
SRPRA-207ENST00000532268 ANKRD26Q9UPS8 1709 aa12.84□□□□□ -0.35
SRPRA-207ENST00000532268 OVOS2A0A0J9YW53 1432 aa12.83□□□□□ -0.36
SRPRA-207ENST00000532268 OVOS2Q6IE36 1432 aa12.83□□□□□ -0.36
SRPRA-207ENST00000532268 CCER2I3L3R5 266 aa12.83□□□□□ -0.36
SRPRA-207ENST00000532268 FBLN1P23142 703 aa12.83□□□□□ -0.36
SRPRA-207ENST00000532268 RRS1Q15050 365 aaKnown RBP12.83□□□□□ -0.36
SRPRA-207ENST00000532268 CFAP53Q96M91 514 aa12.83□□□□□ -0.36
SRPRA-207ENST00000532268 MED1Q15648 1581 aaPredicted RBP12.82□□□□□ -0.36
SRPRA-207ENST00000532268 MTHFSP49914 203 aa12.82□□□□□ -0.36
SRPRA-207ENST00000532268 KCNH5Q8NCM2 988 aa12.82□□□□□ -0.36
SRPRA-207ENST00000532268 CABLES1Q8TDN4 633 aa12.82□□□□□ -0.36
SRPRA-207ENST00000532268 SHPRHQ149N8 1683 aa12.81□□□□□ -0.36
SRPRA-207ENST00000532268 AMPHP49418 695 aa12.81□□□□□ -0.36
SRPRA-207ENST00000532268 SPATA31A6Q5VVP1 1343 aa12.81□□□□□ -0.36
SRPRA-207ENST00000532268 GCP02774 474 aa12.8□□□□□ -0.36
SRPRA-207ENST00000532268 EMILIN1Q9Y6C2 1016 aa12.8□□□□□ -0.36
SRPRA-207ENST00000532268 ALS2Q96Q42 1657 aa12.8□□□□□ -0.36
SRPRA-207ENST00000532268 CCDC184Q52MB2 194 aa12.79□□□□□ -0.36
SRPRA-207ENST00000532268 USP19O94966 1318 aa12.79□□□□□ -0.36
SRPRA-207ENST00000532268 AATKQ6ZMQ8 1374 aa12.79□□□□□ -0.36
SRPRA-207ENST00000532268 ZC3H6P61129 1189 aaKnown RBP12.78□□□□□ -0.36
SRPRA-207ENST00000532268 POLKQ9UBT6 870 aa12.78□□□□□ -0.36
SRPRA-207ENST00000532268 NUTM2BA6NNL0 878 aaPredicted RBP12.77□□□□□ -0.37
SRPRA-207ENST00000532268 NUTM2EB1AL46 878 aaPredicted RBP12.77□□□□□ -0.37
SRPRA-207ENST00000532268 WDR43Q15061 677 aaKnown RBP eCLIP12.77□□□□□ -0.37
SRPRA-207ENST00000532268 NUTM2AQ8IVF1 878 aaPredicted RBP12.77□□□□□ -0.37
SRPRA-207ENST00000532268 FAM9BQ8IZU0 186 aa12.77□□□□□ -0.37
SRPRA-207ENST00000532268 MAP3K19Q56UN5 1328 aa12.77□□□□□ -0.37
SRPRA-207ENST00000532268 PNPLA6Q8IY17 1366 aa12.76□□□□□ -0.37
SRPRA-207ENST00000532268 SLIT3O75094 1523 aa12.76□□□□□ -0.37
SRPRA-207ENST00000532268 DIAPH1O60610 1272 aaKnown RBP12.75□□□□□ -0.37
SRPRA-207ENST00000532268 USP54Q70EL1 1684 aa12.75□□□□□ -0.37
SRPRA-207ENST00000532268 LTV1Q96GA3 475 aaPredicted RBP12.75□□□□□ -0.37
SRPRA-207ENST00000532268 PRDM11Q9NQV5 511 aa12.75□□□□□ -0.37
SRPRA-207ENST00000532268 NUDCQ9Y266 331 aa12.75□□□□□ -0.37
SRPRA-207ENST00000532268 MARF1Q9Y4F3 1742 aaKnown RBP12.74□□□□□ -0.37
SRPRA-207ENST00000532268 FLT4P35916 1363 aa12.74□□□□□ -0.37
SRPRA-207ENST00000532268 U2SURPO15042 1029 aaKnown RBP12.74□□□□□ -0.37
SRPRA-207ENST00000532268 MEX3CQ5U5Q3 659 aaKnown RBP12.74□□□□□ -0.37
SRPRA-207ENST00000532268 RGS17Q9UGC6 210 aaPredicted RBP12.74□□□□□ -0.37
SRPRA-207ENST00000532268 MAP2P11137 1827 aaKnown RBP12.74□□□□□ -0.37
SRPRA-207ENST00000532268 PHRF1Q9P1Y6 1649 aaKnown RBP12.73□□□□□ -0.37
SRPRA-207ENST00000532268 NFAT5O94916 1531 aa12.73□□□□□ -0.37
SRPRA-207ENST00000532268 HOXC9P31274 260 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms