RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 ARHGEF10O15013 1369 aa30.88■■■□□ 2.53
LRRK1-208ENST00000532029 KIF7Q2M1P5 1343 aa30.87■■■□□ 2.53
LRRK1-208ENST00000532029 A0A1W2PP64 1363 aa30.87■■■□□ 2.53
LRRK1-208ENST00000532029 ILDR2Q71H61 639 aa30.86■■■□□ 2.53
LRRK1-208ENST00000532029 ANKRD36BQ8N2N9 1353 aa30.86■■■□□ 2.53
LRRK1-208ENST00000532029 MED1Q15648 1581 aaPredicted RBP30.86■■■□□ 2.53
LRRK1-208ENST00000532029 MYOM1P52179 1685 aa30.86■■■□□ 2.53
LRRK1-208ENST00000532029 MON2Q7Z3U7 1717 aa30.84■■■□□ 2.53
LRRK1-208ENST00000532029 SPATA31A6Q5VVP1 1343 aa30.84■■■□□ 2.53
LRRK1-208ENST00000532029 ALS2Q96Q42 1657 aa30.83■■■□□ 2.53
LRRK1-208ENST00000532029 TTC21BQ7Z4L5 1316 aa30.82■■■□□ 2.52
LRRK1-208ENST00000532029 SSH2Q76I76 1423 aa30.81■■■□□ 2.52
LRRK1-208ENST00000532029 CCDC7Q96M83 1385 aa30.81■■■□□ 2.52
LRRK1-208ENST00000532029 COL22A1Q8NFW1 1626 aaPredicted RBP30.81■■■□□ 2.52
LRRK1-208ENST00000532029 ABTB2Q8N961 1025 aa30.81■■■□□ 2.52
LRRK1-208ENST00000532029 EDC4Q6P2E9 1401 aaKnown RBP30.81■■■□□ 2.52
LRRK1-208ENST00000532029 TTC21AQ8NDW8 1320 aa30.8■■■□□ 2.52
LRRK1-208ENST00000532029 NRKQ7Z2Y5 1582 aa30.79■■■□□ 2.52
LRRK1-208ENST00000532029 NUTM2BA6NNL0 878 aaPredicted RBP30.79■■■□□ 2.52
LRRK1-208ENST00000532029 NUTM2EB1AL46 878 aaPredicted RBP30.79■■■□□ 2.52
LRRK1-208ENST00000532029 NUTM2AQ8IVF1 878 aaPredicted RBP30.79■■■□□ 2.52
LRRK1-208ENST00000532029 WASHC2AQ641Q2 1341 aa30.78■■■□□ 2.52
LRRK1-208ENST00000532029 PLEKHG5O94827 1062 aa30.78■■■□□ 2.52
LRRK1-208ENST00000532029 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.78■■■□□ 2.52
LRRK1-208ENST00000532029 NUTM2GQ5VZR2 741 aa30.76■■■□□ 2.51
LRRK1-208ENST00000532029 HAP1P54257 671 aaPredicted RBP30.75■■■□□ 2.51
LRRK1-208ENST00000532029 NLRP6P59044 892 aa30.73■■■□□ 2.51
LRRK1-208ENST00000532029 NLRP13Q86W25 1043 aa30.73■■■□□ 2.51
LRRK1-208ENST00000532029 CABLES1Q8TDN4 633 aa30.72■■■□□ 2.51
LRRK1-208ENST00000532029 PANK3Q9H999 370 aa30.72■■■□□ 2.51
LRRK1-208ENST00000532029 PIK3C2AO00443 1686 aa30.71■■■□□ 2.51
LRRK1-208ENST00000532029 LRP6O75581 1613 aa30.7■■■□□ 2.51
LRRK1-208ENST00000532029 MEX3CQ5U5Q3 659 aaKnown RBP30.7■■■□□ 2.51
LRRK1-208ENST00000532029 NSD3Q9BZ95 1437 aa30.7■■■□□ 2.5
LRRK1-208ENST00000532029 NME9Q86XW9 330 aa30.69■■■□□ 2.5
LRRK1-208ENST00000532029 CARD14Q9BXL6 1004 aa30.69■■■□□ 2.5
LRRK1-208ENST00000532029 ADAMTS2O95450 1211 aa30.67■■■□□ 2.5
LRRK1-208ENST00000532029 ABCA3Q99758 1704 aa30.65■■■□□ 2.5
LRRK1-208ENST00000532029 PHF23Q9BUL5 403 aaPredicted RBP30.65■■■□□ 2.5
LRRK1-208ENST00000532029 USP19O94966 1318 aa30.65■■■□□ 2.5
LRRK1-208ENST00000532029 USP31Q70CQ4 1352 aa30.64■■■□□ 2.5
LRRK1-208ENST00000532029 CRYBG1Q9Y4K1 1723 aa30.63■■■□□ 2.49
LRRK1-208ENST00000532029 PHRF1Q9P1Y6 1649 aaKnown RBP30.62■■■□□ 2.49
LRRK1-208ENST00000532029 RGS17Q9UGC6 210 aaPredicted RBP30.62■■■□□ 2.49
LRRK1-208ENST00000532029 ZRANB1Q9UGI0 708 aa30.62■■■□□ 2.49
LRRK1-208ENST00000532029 CGNL1Q0VF96 1302 aa30.62■■■□□ 2.49
LRRK1-208ENST00000532029 COG3Q96JB2 828 aa30.6■■■□□ 2.49
LRRK1-208ENST00000532029 KNSTRNQ9Y448 316 aa30.6■■■□□ 2.49
LRRK1-208ENST00000532029 FYB1O15117 783 aa30.59■■■□□ 2.49
LRRK1-208ENST00000532029 GCP02774 474 aa30.59■■■□□ 2.49
LRRK1-208ENST00000532029 SLIT3O75094 1523 aa30.58■■■□□ 2.49
LRRK1-208ENST00000532029 C8orf37Q96NL8 207 aa30.58■■■□□ 2.49
LRRK1-208ENST00000532029 GGNBP2Q9H3C7 697 aa30.58■■■□□ 2.49
LRRK1-208ENST00000532029 USP54Q70EL1 1684 aa30.58■■■□□ 2.49
LRRK1-208ENST00000532029 OVOS2A0A0J9YW53 1432 aa30.57■■■□□ 2.48
LRRK1-208ENST00000532029 OVOS2Q6IE36 1432 aa30.57■■■□□ 2.48
LRRK1-208ENST00000532029 KIF20BQ96Q89 1820 aa30.57■■■□□ 2.48
LRRK1-208ENST00000532029 KCNH5Q8NCM2 988 aa30.57■■■□□ 2.48
LRRK1-208ENST00000532029 MARF1Q9Y4F3 1742 aaKnown RBP30.56■■■□□ 2.48
LRRK1-208ENST00000532029 SOX12O15370 315 aa30.55■■■□□ 2.48
LRRK1-208ENST00000532029 ZC3H6P61129 1189 aaKnown RBP30.55■■■□□ 2.48
LRRK1-208ENST00000532029 NGLY1Q96IV0 654 aa30.55■■■□□ 2.48
LRRK1-208ENST00000532029 ZNF316A6NFI3 1004 aaPredicted RBP30.54■■■□□ 2.48
LRRK1-208ENST00000532029 PRDM11Q9NQV5 511 aa30.53■■■□□ 2.48
LRRK1-208ENST00000532029 KIAA0232Q92628 1395 aa30.52■■■□□ 2.48
LRRK1-208ENST00000532029 NSD2O96028 1365 aa30.5■■■□□ 2.47
LRRK1-208ENST00000532029 ZBTB7CA1YPR0 619 aa30.49■■■□□ 2.47
LRRK1-208ENST00000532029 CPDO75976 1380 aa30.49■■■□□ 2.47
LRRK1-208ENST00000532029 AFF2P51816 1311 aa30.48■■■□□ 2.47
LRRK1-208ENST00000532029 FAM83GA6ND36 823 aa30.48■■■□□ 2.47
LRRK1-208ENST00000532029 PER1O15534 1290 aaPredicted RBP30.48■■■□□ 2.47
LRRK1-208ENST00000532029 NFAT5O94916 1531 aa30.47■■■□□ 2.47
LRRK1-208ENST00000532029 CHRNA2Q15822 529 aa30.46■■■□□ 2.47
LRRK1-208ENST00000532029 COL14A1Q05707 1796 aaKnown RBP30.46■■■□□ 2.47
LRRK1-208ENST00000532029 SOCS7O14512 581 aa30.45■■■□□ 2.47
LRRK1-208ENST00000532029 POTEAQ6S8J7 498 aa30.45■■■□□ 2.47
LRRK1-208ENST00000532029 DDX10Q13206 875 aaKnown RBP30.44■■■□□ 2.46
LRRK1-208ENST00000532029 AMER1Q5JTC6 1135 aaPredicted RBP30.44■■■□□ 2.46
LRRK1-208ENST00000532029 FNBP4Q8N3X1 1017 aaPredicted RBP30.44■■■□□ 2.46
LRRK1-208ENST00000532029 ARHGEF25Q86VW2 580 aa30.43■■■□□ 2.46
LRRK1-208ENST00000532029 ANKRD26Q9UPS8 1709 aa30.43■■■□□ 2.46
LRRK1-208ENST00000532029 ZNF772Q68DY9 489 aaPredicted RBP30.42■■■□□ 2.46
LRRK1-208ENST00000532029 USP21Q9UK80 565 aa30.42■■■□□ 2.46
LRRK1-208ENST00000532029 PLCH1Q4KWH8 1693 aa30.42■■■□□ 2.46
LRRK1-208ENST00000532029 SLIT2O94813 1529 aa30.42■■■□□ 2.46
LRRK1-208ENST00000532029 MORC1Q86VD1 984 aa30.41■■■□□ 2.46
LRRK1-208ENST00000532029 BTG4Q9NY30 223 aa30.4■■■□□ 2.46
LRRK1-208ENST00000532029 AATKQ6ZMQ8 1374 aa30.39■■■□□ 2.45
LRRK1-208ENST00000532029 CC2D1BQ5T0F9 858 aaKnown RBP30.38■■■□□ 2.45
LRRK1-208ENST00000532029 NWD2Q9ULI1 1742 aa30.38■■■□□ 2.45
LRRK1-208ENST00000532029 NPC1L1Q9UHC9 1359 aa30.38■■■□□ 2.45
LRRK1-208ENST00000532029 UNC5CLQ8IV45 518 aa30.37■■■□□ 2.45
LRRK1-208ENST00000532029 FBLN1P23142 703 aa30.36■■■□□ 2.45
LRRK1-208ENST00000532029 CNGB1Q14028 1251 aaPredicted RBP30.36■■■□□ 2.45
LRRK1-208ENST00000532029 BCL9LQ86UU0 1499 aa30.36■■■□□ 2.45
LRRK1-208ENST00000532029 TNNT2P45379 298 aaPredicted RBP30.35■■■□□ 2.45
LRRK1-208ENST00000532029 LTN1O94822 1766 aa30.34■■■□□ 2.45
LRRK1-208ENST00000532029 LMO7Q8WWI1 1683 aa30.34■■■□□ 2.45
LRRK1-208ENST00000532029 MAP3K19Q56UN5 1328 aa30.34■■■□□ 2.45
LRRK1-208ENST00000532029 ABCC6O95255 1503 aa30.33■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms