RNA–Protein interactions for RNA: ENST00000531834.1

AC055876.2-201, humanhuman

BASIC

Gene AC055876.2, Length 546 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.2-201ENST00000531834 PLEKHG3A1L390 1219 aa22.38■■□□□ 1.17
AC055876.2-201ENST00000531834 BCL9LQ86UU0 1499 aa22.37■■□□□ 1.17
AC055876.2-201ENST00000531834 CARD11Q9BXL7 1154 aa22.37■■□□□ 1.17
AC055876.2-201ENST00000531834 RGS12O14924 1447 aa22.37■■□□□ 1.17
AC055876.2-201ENST00000531834 SBNO2Q9Y2G9 1366 aa22.37■■□□□ 1.17
AC055876.2-201ENST00000531834 ACEP12821 1306 aa22.36■■□□□ 1.17
AC055876.2-201ENST00000531834 PAK3O75914 559 aaPredicted RBP22.36■■□□□ 1.17
AC055876.2-201ENST00000531834 CLSPNQ9HAW4 1339 aa22.35■■□□□ 1.17
AC055876.2-201ENST00000531834 CABLES1Q8TDN4 633 aa22.35■■□□□ 1.17
AC055876.2-201ENST00000531834 CABP2Q9NPB3 220 aa22.35■■□□□ 1.17
AC055876.2-201ENST00000531834 PHRF1Q9P1Y6 1649 aaKnown RBP22.35■■□□□ 1.17
AC055876.2-201ENST00000531834 BRD4O60885 1362 aaPredicted RBP22.34■■□□□ 1.17
AC055876.2-201ENST00000531834 PLEKHG5O94827 1062 aa22.33■■□□□ 1.17
AC055876.2-201ENST00000531834 COL14A1Q05707 1796 aaKnown RBP22.33■■□□□ 1.16
AC055876.2-201ENST00000531834 UNC5CLQ8IV45 518 aa22.32■■□□□ 1.16
AC055876.2-201ENST00000531834 ATAD2Q6PL18 1390 aa22.32■■□□□ 1.16
AC055876.2-201ENST00000531834 PCGF6Q9BYE7 350 aa22.3■■□□□ 1.16
AC055876.2-201ENST00000531834 NRAPQ86VF7 1730 aa22.29■■□□□ 1.16
AC055876.2-201ENST00000531834 USP6P35125 1406 aa22.29■■□□□ 1.16
AC055876.2-201ENST00000531834 AKAP12Q02952 1782 aa22.28■■□□□ 1.16
AC055876.2-201ENST00000531834 GLI3P10071 1580 aa22.26■■□□□ 1.15
AC055876.2-201ENST00000531834 NRKQ7Z2Y5 1582 aa22.26■■□□□ 1.15
AC055876.2-201ENST00000531834 GJD4Q96KN9 370 aaPredicted RBP22.26■■□□□ 1.15
AC055876.2-201ENST00000531834 CABP1Q9NZU7 370 aa22.26■■□□□ 1.15
AC055876.2-201ENST00000531834 ABTB2Q8N961 1025 aa22.24■■□□□ 1.15
AC055876.2-201ENST00000531834 TIMELESSQ9UNS1 1208 aa22.24■■□□□ 1.15
AC055876.2-201ENST00000531834 FAM83GA6ND36 823 aa22.23■■□□□ 1.15
AC055876.2-201ENST00000531834 VPS72Q15906 364 aa22.23■■□□□ 1.15
AC055876.2-201ENST00000531834 PRDM11Q9NQV5 511 aa22.22■■□□□ 1.15
AC055876.2-201ENST00000531834 USP19O94966 1318 aa22.22■■□□□ 1.15
AC055876.2-201ENST00000531834 MON2Q7Z3U7 1717 aa22.22■■□□□ 1.15
AC055876.2-201ENST00000531834 PIK3C2AO00443 1686 aa22.2■■□□□ 1.15
AC055876.2-201ENST00000531834 SLC24A1O60721 1099 aa22.2■■□□□ 1.14
AC055876.2-201ENST00000531834 NUTM2GQ5VZR2 741 aa22.2■■□□□ 1.14
AC055876.2-201ENST00000531834 NLRP13Q86W25 1043 aa22.2■■□□□ 1.14
AC055876.2-201ENST00000531834 ZNF692Q9BU19 519 aaPredicted RBP22.2■■□□□ 1.14
AC055876.2-201ENST00000531834 KIAA0232Q92628 1395 aa22.2■■□□□ 1.14
AC055876.2-201ENST00000531834 SSH2Q76I76 1423 aa22.2■■□□□ 1.14
AC055876.2-201ENST00000531834 BTG4Q9NY30 223 aa22.19■■□□□ 1.14
AC055876.2-201ENST00000531834 CPSF1Q10570 1443 aaKnown RBP22.19■■□□□ 1.14
AC055876.2-201ENST00000531834 SLIT3O75094 1523 aa22.18■■□□□ 1.14
AC055876.2-201ENST00000531834 UPF1Q92900 1129 aaKnown RBP eCLIP22.18■■□□□ 1.14
AC055876.2-201ENST00000531834 CCDC9Q9Y3X0 531 aaKnown RBP22.18■■□□□ 1.14
AC055876.2-201ENST00000531834 CPDO75976 1380 aa22.17■■□□□ 1.14
AC055876.2-201ENST00000531834 USP47Q96K76 1375 aa22.16■■□□□ 1.14
AC055876.2-201ENST00000531834 TTC21AQ8NDW8 1320 aa22.16■■□□□ 1.14
AC055876.2-201ENST00000531834 PUS7Q96PZ0 661 aaKnown RBP22.16■■□□□ 1.14
AC055876.2-201ENST00000531834 KTN1Q86UP2 1357 aaKnown RBP22.15■■□□□ 1.14
AC055876.2-201ENST00000531834 NINLQ9Y2I6 1382 aa22.14■■□□□ 1.14
AC055876.2-201ENST00000531834 LMO7Q8WWI1 1683 aa22.14■■□□□ 1.14
AC055876.2-201ENST00000531834 ST20-MTHFSA0A0A6YYL1 179 aa22.14■■□□□ 1.13
AC055876.2-201ENST00000531834 ZC3H6P61129 1189 aaKnown RBP22.14■■□□□ 1.13
AC055876.2-201ENST00000531834 BRWD3Q6RI45 1802 aa22.13■■□□□ 1.13
AC055876.2-201ENST00000531834 TTC21BQ7Z4L5 1316 aa22.13■■□□□ 1.13
AC055876.2-201ENST00000531834 NLRP6P59044 892 aa22.13■■□□□ 1.13
AC055876.2-201ENST00000531834 CCER1Q8TC90 406 aaPredicted RBP22.13■■□□□ 1.13
AC055876.2-201ENST00000531834 TESK2Q96S53 571 aa22.13■■□□□ 1.13
AC055876.2-201ENST00000531834 GCP02774 474 aa22.12■■□□□ 1.13
AC055876.2-201ENST00000531834 CHRNA2Q15822 529 aa22.12■■□□□ 1.13
AC055876.2-201ENST00000531834 USP54Q70EL1 1684 aa22.11■■□□□ 1.13
AC055876.2-201ENST00000531834 CD163L1Q9NR16 1453 aa22.11■■□□□ 1.13
AC055876.2-201ENST00000531834 TMC1Q8TDI8 760 aa22.11■■□□□ 1.13
AC055876.2-201ENST00000531834 HDGFL2Q7Z4V5 671 aaPredicted RBP22.1■■□□□ 1.13
AC055876.2-201ENST00000531834 SPATA31A5Q5VU36 1347 aa22.09■■□□□ 1.13
AC055876.2-201ENST00000531834 SPATA31A7Q8IWB4 1347 aa22.09■■□□□ 1.13
AC055876.2-201ENST00000531834 SEPT12Q8IYM1 358 aa22.09■■□□□ 1.13
AC055876.2-201ENST00000531834 EDC4Q6P2E9 1401 aaKnown RBP22.08■■□□□ 1.13
AC055876.2-201ENST00000531834 ONECUT3O60422 494 aaPredicted RBP22.08■■□□□ 1.13
AC055876.2-201ENST00000531834 TERF2IPQ9NYB0 399 aa22.08■■□□□ 1.13
AC055876.2-201ENST00000531834 THSD7AQ9UPZ6 1657 aa22.07■■□□□ 1.12
AC055876.2-201ENST00000531834 CAMTA1Q9Y6Y1 1673 aa22.07■■□□□ 1.12
AC055876.2-201ENST00000531834 A0A0G2JS52 829 aa22.07■■□□□ 1.12
AC055876.2-201ENST00000531834 MYT1Q01538 1121 aa22.07■■□□□ 1.12
AC055876.2-201ENST00000531834 TMF1P82094 1093 aa22.06■■□□□ 1.12
AC055876.2-201ENST00000531834 KCNH5Q8NCM2 988 aa22.06■■□□□ 1.12
AC055876.2-201ENST00000531834 STRN4Q9NRL3 753 aa22.06■■□□□ 1.12
AC055876.2-201ENST00000531834 A0A1W2PP64 1363 aa22.06■■□□□ 1.12
AC055876.2-201ENST00000531834 COL5A2P05997 1499 aaPredicted RBP22.05■■□□□ 1.12
AC055876.2-201ENST00000531834 FAM98CQ17RN3 349 aaKnown RBP22.05■■□□□ 1.12
AC055876.2-201ENST00000531834 SLC12A5Q9H2X9 1139 aa22.05■■□□□ 1.12
AC055876.2-201ENST00000531834 AATKQ6ZMQ8 1374 aa22.04■■□□□ 1.12
AC055876.2-201ENST00000531834 USP31Q70CQ4 1352 aa22.04■■□□□ 1.12
AC055876.2-201ENST00000531834 EVA1CP58658 441 aa22.04■■□□□ 1.12
AC055876.2-201ENST00000531834 NFAT5O94916 1531 aa22.04■■□□□ 1.12
AC055876.2-201ENST00000531834 ABCC6O95255 1503 aa22.04■■□□□ 1.12
AC055876.2-201ENST00000531834 SPATA31A1Q5TZJ5 1347 aa22.04■■□□□ 1.12
AC055876.2-201ENST00000531834 COL18A1P39060 1754 aa22.02■■□□□ 1.12
AC055876.2-201ENST00000531834 CDCA8Q53HL2 280 aa22.02■■□□□ 1.12
AC055876.2-201ENST00000531834 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.02■■□□□ 1.12
AC055876.2-201ENST00000531834 ZBTB7CA1YPR0 619 aa22.01■■□□□ 1.11
AC055876.2-201ENST00000531834 KRT27Q7Z3Y8 459 aa22.01■■□□□ 1.11
AC055876.2-201ENST00000531834 CCDC125Q86Z20 511 aa22.01■■□□□ 1.11
AC055876.2-201ENST00000531834 ANKRD36BQ8N2N9 1353 aa22■■□□□ 1.11
AC055876.2-201ENST00000531834 BLMP54132 1417 aaPredicted RBP21.98■■□□□ 1.11
AC055876.2-201ENST00000531834 CRB1P82279 1406 aa21.98■■□□□ 1.11
AC055876.2-201ENST00000531834 OVOS2A0A0J9YW53 1432 aa21.97■■□□□ 1.11
AC055876.2-201ENST00000531834 OVOS2Q6IE36 1432 aa21.97■■□□□ 1.11
AC055876.2-201ENST00000531834 SOX12O15370 315 aa21.97■■□□□ 1.11
AC055876.2-201ENST00000531834 LARP1Q6PKG0 1096 aaKnown RBP21.97■■□□□ 1.11
AC055876.2-201ENST00000531834 ARHGEF25Q86VW2 580 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms